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Query: gi|16082716|ref|NP_395162.1| secreted effector protein (YPCD1.28c) [Yersinia pestis CO92], from Y.pestis

Results of FFAS03 search in COG0516
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTINIKTDSPIITTGSQLDAITTETVKQSGEIKKTEDTRHEAQAIKSSEASLSRSQVPELIKPSQGINVALLSKSQGDLNGTLSILLLLLELARKAREMGLQQRDIENKATITAQKEQVAEMVSGAKLMIAMAVVSGIMAATSTVASAFSIAKEVKIVKQEQILNSNIAGREQLIDTKMQQMSNIGDKAVSREDIGRIWKPEQVADQNKLALLDKEFRMTDSKANAFNAATQPLGQMANSAIQVHQGYSQAEVKEKEVNASIAANEKQKAEEAMNYNDNFMKDVLRLIEQYVSSHTHAMKAAFGVVLast
1 -16.100[S] COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain  ali follow..  11  69.....................................................................KSLREGVFQLDDILAQLRVAKTELEQASQAEIESELTAVREEQQLVQERSRELNRNYTKA---------------------LQLLRRVSEQSRNLRQEVANLSAERAQLNEQKDSLLAESSELQSQVKLRDQELSKRQERIAQQEKVLARQREQ---VQSLEKRFASLEAQRQQLQAEINQRDTKIDQLDQAIAAKDNDAREEKLQGLETELSFLQREVEELERYYQDYQE...... 279
2 -13.500[YU] KOG4460 Nuclear pore complex, Nup88/rNup84 component  ali follow..  499..........................................................HPASPPLLCTREDVEVAESSLRVLAETPDSFEKHIRSQRSVANPAFLKASEKDIAPPPEECLQLLSRATQVFREQYILKQDLAKEEIQRRVKLLC-----DQKKKQLEDLSYCREERKSLREMAERLADKYEEAKEKQEDIMNRMKKLLHSFHSELPVLS--DSERDMKKELQLIPDQLRHLGNAIKQVTMKKDYQQQKMEKSLPKPTIILSAYQRKCIQSILKEEGEHIREMVKQINDIRNHV.... 739
3 -13.100[D] KOG4438 Centromere-associated protein NUF2  ali follow..  161...............................................................EALMKLERLDSVPVEEQEEFKQLSDGIQELQQSLNQDFHQKTIVLQEGNSQKKSNISEKTKRLNEL---------------------KLLVVSLKEIQESLKTKIVDSPEKLKNYKEKMKDTVQKLKNARQEVVEKYEIYGDSVDCLPSCQLEVQLYQKKIQDLSDNREKLASILKESLNLEDQIESDESELKKLKTEENSFKREKLATAQFKINKKHEDVKQYKRTVIEDCNKVQEK..... 383
4 -13.000[T] KOG2008 BTK-associated SH3-domain binding protein SAB  ali follow..  20...............................................................................................LLLQIELENLNSATDEINKLEIELEEANSTFRILLNESTRR----------------NCIEKARPYYEALDKAREAQIECQKAAVKFQRANEIHAAAKETVALAEQRFMSNSHEWQFDNAWQEMLNHATQKVMDAETQKADCHAEHQRLTKLFNAAEQKLQQLEDRFRRSINKPYFEEKQVCQDQLQTQKNRIQELQQQVAGAKSTYSTAL 225
5 -12.900[UR] KOG4677 Golgi integral membrane protein  ali follow..  246..............................................................................................EEEIRAMVEQLRLAKFNLNENKKEFDEYKNKAQKIL---------------TAKEKLVESLKSEQGIGSSDRPVHLLQAEVEEIRVERDLTKADLESAQLQVYTLRSDMEELEAQIRDLQSQLSDQKRTHLEEKQTWDSTRQGDQHQSKMLEKENELRKTISDLRSRMRDEQTKQEDDGSSQLTDLLLQKQQQLEDVLRNNQVLNVRL.... 461
6 -12.200[U] KOG0993 Rab5 GTPase effector Rabaptin-5  ali follow..  664..............................................................................................QAEDFILPDTTEALRELVLKYREDIINVRTAADHV------------------------EEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKI---SLEEQLKKETAAKATVEQLMFEEKNKAQQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERI...... 844
7 -12.100[A] KOG2991 Splicing regulator  ali follow..  11  19.............................................................................................KVMARDELILRWKQYEAYVQALEGKYTDLNSNDVTGLRESEEK--------------KQQQQESARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSVAQLRS-KGELEQTKDKLEQAQNELSAWKFTPDSQKKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQL.... 229
8 -12.100[Z] KOG1003 Actin filament-coating protein tropomyosin  ali follow..  10  3..........................................................................................................AIKKKMQMLKLDKENAIDRAE----------------------------QAEADKKQAEDRCKQLEEEQQALQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEADVASLNRR---IQLVEEELDRAQERLATALQKLEEAEKAADESERKVIENRAMKDEEKMELQEMQLKEAKHIAEDSDRKYEEVARKL.... 169
9 -11.800[S] COG1511 Predicted membrane protein  ali follow..  274...........LLAGLQNVQKGTPNLTNGLDQLNSKVQEGSEKAAKAEKIIALDLTKLETAVNNLEKSETAMKEFKKQLTDFENSLKNRDQAFKNVINSSDFLTAEQKSQLINSVEKKLPQVDAPDFD-----QILSQLPTADQLPDIATIKSSLEDVKAQVAQVKAMPEATSKLYNGAKTIQDAIDRLTEGADKIYNGSQKLTDGQTKLTAGIGEYNKQFAKKAGSEQLVTGSSQVSGGLFKLLDGSKQVQSGSSKLASASLDTGLGKLLDGTGELSSKLKDAADQTGDIDADDQTYG....... 560
10 -11.800[U] KOG4324 Guanine nucleotide exchange factor  ali follow..  2..........................................................................................................................................................VDTISVLNPIHLDLSVDPQDNVRISARSTTSSSATSSDSELMSPRAEELLRMQAELRATRTALAEKDKKMTQIQV------TVDAEVQELTEKEAYKMVNTAEARREKAGKLLTESRLEVEVLQAEVRALKELISAPGMGQNHFKQTT.... 147
11 -11.700[Z] KOG1853 LIS1-interacting protein NUDE  ali follow..  1.......................................................................................................................................................................MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIE--TRNRDLLSENNRLRMELETIKEKFEVQHSEGYRQISEDDLAQTKAIKDQLQKYIRELEQANDDLERAKRATIMSL.... 135
12 -11.600[S] KOG4687 Uncharacterized coiled-coil protein  ali follow..  20..............................................................................................NVETSAVHRKLQSKVEALRILRQELEQFRVERD----------------------------QYKLVAETLQLRYSALKSNSELLAVGGCGALSENSSLAALLHETREQNLKLSTEVEALRQRLNELHGDMELLRTEASNKSRVQAMASENAARNKEELQWRRERANFICH---EGLKKRNAQLAFDLKAVIDEKEELITERDAYKCKAHRL. 201
13 -11.200[R] KOG4398 Predicted coiled-coil protein  ali follow..  95................................................................................................SQAERPESLTEKQQRYINLQAGLKTFSTRYE-------------------------RLIGQHRSNEDRLMAIKAKRKQLELLQQLISGTGQRLRVLGERRDELRRANAEKRKNLPKYPDKVKMLENYVLDRVE------KIEKLRETHLGLLDSIKQAARRSIQQLVTAEVVLKEEQQRRASVERTEEAETIAALADAKNTS........ 270
14 -11.000[U] KOG0999 Microtubule-associated protein Bicaudal-D  ali follow..  52...............................................................................................EEKHQLKLQFEELEVDYEAIRSEMEQLKEAFGQ------AHTNHKKVAADGESREESLIQESASKEQYYVRKVLELQTELKQLRNVLTNTQSENERLASVAQELKEINQNVEIQRGRLRDDIKEYKFR-QDYSELEEENISLQKQVSVLRQNQVEFEGLKHEIKRLEEETENSQLEDAIRLKEISERQLEEALETLKTEREQKNS...... 256
15 -11.000[S] KOG0992 Uncharacterized conserved protein  ali follow..  10  232..............................................................................................EKRVESLSSNLSESKQQGDMLRKQLIQAKDDKHI----------------------QQYEVKLQTSTAELERRLRESEHDVERLRTSQLEMATKFEEASRENTDLLSKIDILQDQLSLEEDRRKLCEEQIDRLKGVESFVESSSHRIEETEKERETAEEDREQAELEAAEYREEKMLKLTQELTERNMELQRKLKDEEGKNTSHNSTI.... 420
16 -10.900[Z] KOG1850 Myosin-like coiled-coil protein  ali follow..  266..............................................................................................RQENIELGEKLKKLIEQYALREEHIDKVFKRKELQQ--------------------QLVDAKLQQTTQLIKEADEKHQREREFLLKEATESRHKYEQMKQQEVQLKQQLSLYMDKFEEFQTTMAKSNELFTTFRQEME---KMTKKIKKLEKETIIWRTKWENNNKALLQMAEEVRDKEYKALQIKLERLEKLCRALQTERNELNEKV.... 452
17 -10.900[K] KOG0963 Transcription factor/CCAAT displacement protein CDP1  ali follow..  11  244..................................................................................................DDANKIIVELQAEIAVLKQNTKEQKSGSSQD-----------------------LSNQQKQQLDFMDSLNKKLSTELESIKEASRKEMETHCATIQTLENEVKEARKVKEESLTLANKFSDYDEIKRELSVLKQIEFSGEHATHENTSLESQLLKREKQLSEELARSTNAQLTDRITQESKKASFLEQKASEQEEVIRKLEKDLADV. 430
18 -10.800[S] KOG2216 Conserved coiled/coiled coil protein  ali follow..  2...................................................................EDGEIEEGMVTADEFPTPEVTTIETIQPPREPGKSPLELESKTSVEEIVAKMLSMKKQGNHK------SEIRELLTQMFLNFVNLRQAAILTEEDKVKAETERAKAPVDFTTLQLHNLMYEKSHYVKAIKACR-DFKSKYPDIDLVPEQDFFRHAPEAIKDQSLSSDSSHVLMPKRLNFELHQ--RKELCKHRARLEQQKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNHL.... 231
19 -10.600[R] COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains  ali follow..  376...........................................................................................LTSKVYKAEIQQRREAFNRAKMDYDHLVSQIQQLGGLEGFIAKRAMLEKMKDEILGLPEEEKRALAALHDTARERQKQKFLEGFFIDAASIPGVGPARKAALRSIETAADVTRRGVKQVKGFGDHLTQAVIDKASCERRFVFRPNEAVTPAERQAVMAKMAAKRHRLESAL-TVGATELQRFRLHAPARTMPLMEPLRQAAEKLAQAQADLSR.. 590
20 -10.600[U] KOG4809 Rab6 GTPase-interacting protein involved in endosome-to-TGN transport  ali follow..  10  381..............................................................................................QTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALS---------------------TEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALLRLEEKETMLNKKTKQIQDMAEEKGT---AGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQM.... 566
21 -10.500[D] KOG4593 Mitotic checkpoint protein MAD1  ali follow..  317............................................................................................SRRERAESELSKFHDLQLSMEKLENELSSWKSLLNDIPGVSCPDDIVMRFSVLQNEVVQSTM-EASTRIKQLEETLEAIQLGRQNAVSEAALAKEKSEALKTDVKRIEVMLTLVTEEKEQLKAVVNELRKSNSEGAADGALIQGFESSLAKKENYIKDLEQDLNQLKDNRQRTEIELLNEKLVDEARRNKSLERDSDRLRSEISLLESKL.... 534
22 -10.500[S] KOG1103 Predicted coiled-coil protein  ali follow..  106..........................................................................................QIDEEKIVQMYESQVDQLDKMMAVQKQSQRNAAVLLVAL------------------------EKKQYKLVKKLEADREAKIRYAKQGDDLVAHLEKERNQLQQQIEFHIEEKRKAEIAKDKMEMTLGNEKKRHE------SIVLYLIQERKQMLLKMHELRVKAEQIMLQNQNDPTKPGPSSALSERELIEELKKEVTFLRAERESLTKTQ.... 287
23 -10.400[OUTIV] KOG3956 Alpha 2-macroglobulin receptor-associated protein  ali follow..  10  171............................................................................................EKAEISGFTAEELKSLKQEFDHHQDKVDVYYSLLENIGTVDTDKHENAINTEDLDTYNLISNDVNENDIKTHAQNVKSFENDLNTLRGHHTGIKDHYDRLERLVSSGPHSQDFIEPKVQGLWRVAQASNFTVKELESIKTELHHFESRLLKLRHLHAEHAEKYKGEKVKDKSSRFEEMEDQLKKQTRKVEKLQENIEKTIFKHTE......... 378
24 -10.300[D] COG4942 Membrane-bound metallopeptidase  ali follow..  42.........................................................................................................ADERDQLKSIQADIAAKERAVR----------------------------QKQQQRASLLAQLKKQEEAISEATRKLRETQNTLNQLNKQIDEMNASIAKLEQQKAAQERSLAAQQARQETIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQATQALNERKKTLAGLESSIQQGQQQLSELRANESRLRNSIARA. 251
25 -10.200[S] KOG4451 Uncharacterized conserved protein (tumor-associated antigen HCA127 in humans)  ali follow..  10  77.....................................................................................................................................................................LDILSGIDEFHKLANEIRKDEDCVKALEQHITSCNGIKGELDMERRSHAEELRQINQDINTLED------ITKSSKTELEKRKMKISVAMGEVA--RMRGFINENLESMNIIHKLETSEEEELFKVTCARQTTDP...... 203
26 -10.100[S] COG5613 Uncharacterized conserved protein  ali follow..  12  110.................................................................................LGKLVSNLEEVRKDIKIADIQRLHEQNMKKIEENQEKIKETEENAKQV-IASVIVGAIMVASGVGAVAGAMMAVKQAAEDGLISQEAMKILGPILTAGAEFSAKVAQISTGISNTVGSAVTKLGGSFAGLTMSHAIRTGSQATQVAVGVGSGITQTINNKKQADLQHNNADLALNKADMAALQSIIDRLKEELSHLSESHQQVMELIFQMINAKGDMLHNLAGRP 398
27 -10.000[R] COG1579 Zn-ribbon protein, possibly nucleic acid-binding  ali follow..  20...........................................................................................................................................................RLMRVKKEHQKELAKVQSLKSDIRRKVQEKELEMENLKTQIRDGENRIQEISEQINKLENQQAAVKKMDE-TQEMTTANKERRSLEHQLSDLMDKQAGGEDLIVSESLASTENSSSVIEKEIFESIKKINEEGKALLEQRTELKHATNPEL 175
28 -9.860[O] KOG0827 Predicted E3 ubiquitin ligase  ali follow..  77..............................................................................................................................................................EQLDNAMLSMKMVEKERNKDEQQIRDLKETQKKCLKTIAGLEQKVQKKDFLISSYVEQIGVLKSDAHVVDGLRKENKTLKSQIQSMEGISAILAAGSADADR-KNEADPHVLANWVSTLKRELRQCESKKTELRNVVKVVQNDL.... 221
29 -9.810[S] KOG4421 Uncharacterized conserved protein  ali follow..  7..............................................................................................AMDGTVPEAKYQKLATEYSKLRAQATVLKKAVL----------------------------EEQSKEASLREQLQQYATSLRRTEQEVDSLGFRNKQLESRVSQLQQEISVHEQPKKKDKDSGGRRGVQSNSRPDADPSLEELQKKIMENAQLTSLIDDKQRDLLLERIASLEQKLEKRIGDQNELEKRLRKEVETLQHRNSELETKL.... 197
30 -9.720[S] COG5412 Phage-related protein  ali follow..  10  1...........................................................................................MADYTLTAKLTADPSGFRAGFQKAQESLANLQSRVNQKRVQSIGKSISDLGSKLTRNITVPAVGAATALTSITLVKGFDRLVGIDSARAKLKGLGHDAEAIDSIMDSALASVKGTAFGLDEAATTAANAVAAGPPGKELTRYLSLTADTAAIAGTSLGEIGAILNKV-TTSGRAYNSELQMLSDRGLPVYQWLAEEANTTADAIFDMASK..... 212
31 -9.590[R] KOG4331 Polytopic membrane protein Prominin  ali follow..  172....................................................................................MTSQYAQIGLDKLPNRMNQCVDDLQSYKRDSDMRIRKLLIDDYQVLNSTITKQLSTAGYNVVDRVKKLTGAHVIDVFMNISKVAQEMHDGLESVHGKVRFLNEEGSRFEAEFSRLRNTANEE-AKAERLLESLAVTQFKIDQKFLPDATETGLSEVNANITQVLAASNNQFEQLESRIQHEIDKETYSAQNMLKQIGDDLFLVAETISTQLRKVT....... 402
32 -9.570[KT] COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription  ali follow..  54......................................................................................................ARVKLSHDKLKDLRERKASLEARTLEALSKNVNPSL----------------------INEVAEEIARLENLITAEEQVLSNLEVSRDGVEKAVAATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTVGASSSVSTAAESLKRLQTRQAERQARLDAAAQLEKVADGRDLDEKLAEA-SSAQDVLARLQRQQGE......... 232
33 -9.510[R] KOG4403 Cell surface glycoprotein STIM, contains SAM domain  ali follow..  233.............................................................................................QNRYSKEHMKKMMKDLEGLHRAEQSLHDLQERLHKA---------------------QEEHRTVEVEKVHLEKKLRDEINLAKQEAQRLKELREGTENERSRQKYAEEELEQVREALRKAEKELESHSSWYAPEAEVQYYNIKKQNAEKQLLVAKEGAEKIKKKRNTVAHSSSLDDVDHKILTAKQALSEVTAALRERLHRWQQIEI...... 435
34 -9.470[S] KOG4360 Uncharacterized coiled coil protein  ali follow..  110.....................................................................NDIDMVTHLLAERDRDLELAARIGQAKRNHILSEQNESLEEQLGQAFDQVNQLQHELCKKDELLRIVSIASEESETDSSCSTPLRFNESFSLSQGLLQLEMLQEKLKELEEENMALRSKACHIKTETVTYEEKEQQLVSDCVKELRETNAQMSRMEELSGKSDELIRYQEELSSLLSQIVDLQHKLKEHEKEELKLHLQASKDAQRQLTMELHELQDRNMECLGMLHESQEEI.... 347
35 -9.380[U] KOG3838 Mannose lectin ERGIC-53, involved in glycoprotein traffic  ali follow..  236.......................................................................ISAATGGLADDHDVFHFLTTSLHAAGQVQEQPKVENQEKLTQEYKEYQDKLEKQKQEYKKDHPDE------HKDEEDWEEFYESENQRELRQIWQGQSQIADHLRELSRKVDEIIGRQETTLSLVSRNAGQALPPPAAGGVPQQQLPVGAVSRSDVDLLLTNQNMLLSSIREIRQLVGDINVRTDNIQTNQKHAPTAQIQSTGYDVQTLIAEMRDGMNQVKQGITHVGQRLAA.. 462
36 -9.300[S] COG5280 Phage-related minor tail protein  ali follow..  9.........................................................................................................................................................TIAIGADTTGVTNGLKDIGKQSNSVNSELRDVERLLKLNPNNVELVAQKQQLLSKQVELTTKKLDGLK---GAQADVDRQFKSGDIGEEQYRAFQREVVATEGRLDHQSLKDVESSSGEAGNATKGLGGKFDELGQSVEDVGEAVKGGVL... 157
37 -9.270[S] COG3883 Uncharacterized protein conserved in bacteria  ali follow..  27.........................................................................................................ADVNTDIQNQDKKINDIKSKKT----------------------------GLQSDLSSLVADLEKAQEKAKSLQGEFDQTGKELKQLNQDIKDINERIKERETVLKERARAMQKTSNSNAYLEVILDAEN--VSAVNQLVDSDKSI--EDQQKDEKALKTKQTAVKKKQEEQATAIHEFEAQQNKIEAQKAEKEAIVAQ.. 201
38 -9.190[O] KOG0978 E3 ubiquitin ligase involved in syntaxin degradation  ali follow..  459..........................................................................................ETEEAIQDSERQDIKSEFIAMASTLSKEMEMMEAQLK-------------------------RWKDTAQDALYLREQAQSLRVSLSNKADEQKGLEDKCAKQMAEIKSLKALIEKLLKEKLQLQNLASICTRECNDDRGLAEIKDSQRKAQAQAEELKNVLDEHFLELRVKAAHETESACQERLATAKAEIAELRTQLDLSEREVLELKEGI.... 645
39 -9.140[S] COG1340 Uncharacterized archaeal coiled-coil protein  ali follow..  11  1.......................................................................MTDLLQEFEEKRDILRKAIEEHIKKRD-EAAQQSRNYAEQRDQLNAKAHEMRDQVK----------------------------QKISQKNALIEEVQKIRTEKEEHFQKLSELRKEYKKITEEANYASRDIKAKERELQKLIKKQETMQLPKAEEDKVVQEIKRLSNEIKKMKEDREKQLSENEKVKADKEKTLARDLKKRAEEISNQISEISNDINKSLQELDEVRKKA.... 210
40 -9.140[S] COG4913 Uncharacterized protein conserved in bacteria  ali follow..  242...............................................................................SRIEALICHFDDLDRAHQAVLTAKQQVKLLVPLVDDVQKHQTQLASIQA---------LEAGRDTLRPYFAQLKGELLKHRLDALAAEAAQLTVEIQHLEEQRKAADSEVTQLRQALRDNGDRLEELAAEIEQLEQAKAQRQKKSDRYQTLLTKIDGFLTQQQRFAQHTEELNAAIERLHNDKSEKDRADAREKHTTLLAEINSLQQRQSNISAAQIRIRHDLCMAL 470
41 -9.060[S] KOG4657 Uncharacterized conserved protein  ali follow..  25........................................................................................................................................................TSCQMAGLRDTYKDSIKAFAEKLSVKLKEEERMVEMFLEYQNQISRQNKLIQEKKDNLLKLIAEVKGKKQELEVLTA------NIQDLKEEYSRKKETISTANKANAERLKRLQKS...................................... 134
42 -9.040[D] KOG0995 Centromere-associated protein HEC1  ali follow..  301.......................QHMEKELAMVKSEQEEKISENEKVQKMVDDLKNKIELQKQIHGLTGKEVRQMNLDNNKDKEVVL---EIQSELDRLSKETWKLKDEDFFKEQKSKFIHLAEQIMKILSGLNIQ-LKDYWETLNKIWVPEISRQLHQRKLELETEQSRFSNKAVTAEERIQIQSETLCEAKKNEAREERIRRNERDSWKDARKHIEQRYEQLLNKEVLLKQMKLDGSLEKEIEDETARMSATGEEHIQKRSQL-EAGIRQILDLMVVEIAEIENKKIGFHVQCAGIEKAVL... 590
43 -9.030[R] KOG0804 Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein)  ali follow..  413.................................................................................................TSQLEDQRKYFEGLRHDMEQTMSKMEKTAYAQVE------------------------NLEHQLTERSTELKSLKGDLDDTVTARKVAEKRATQTNEKVNKLANELKDEREINQMLRKDQQVWKGQVE------KLIESQKTARTEYEKKIEDLQSQVNDLLMHETQNKLKEQLDAGKITQEEITESQVELDSSSSSSRKLNRKKKK.. 590

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Li W, Jaroszewski L, Godzik A. Sequence clustering strategies improve remote homology recognitions while reducing search times. Protein Eng. 2002 Aug;15(8):643-9.