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Query: VFG043518(gi:29134931) (acm) collagen adhesin precursor Acm [Acm (VF0419)] [Enterococcus faecium str. TX2555], from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKKCRNIILSMLFIITNITSLIPVHVYADAGRDISSNVTSLTVDPTNITDGGNIKVKFSFDEKKQNIQPGDYLWINWPSEGNIRGEGFQKEIPLMIENKNVGTLTVRKDSAQVVFNENIKNLDSVEGWGQFEIQARNVTDTGEENTGPFTVTSGDKTATVNVTKPASGSSSSVFYYKTGDMLPEDTKHIRWFLNINNNGTYVEQPVKISDEIQSGQRLDPSTFEINQIHLGEQKVYRGEEGIQQFLQDFPSATFNFSVTDNYIEITIPKNFVNLRKIMVSYKTIIENPEQINFENHSEAWFKEFNKPAVDGESFNHTVKNISASGGVNGTVRGELKIFKYINDTEIGIPNVTFELRRADEQPIQGQSSILLTSNEQGEASIKGLQVGDYVVKEKEAPNWIDFDPLSSNELKFSINENDTEGVSLPIYNKKKVTNITATKIWNGGTTPRPSIYFKLFRASTNNWEPVPDAETKRLDNGITSVTWEDIQQYDDSGNEYTFKVQEVDQNGNDYVPSGYQKIENGLVVTNENKEVISVSGQKTWEDNENQDGKRPTTITVNLLADGQPIQHKEVSEKDDWRYRFTNLPKYRDGQEIIYTVTEDNVPEYSTTIDGYNIKNSYTPEKTNISIPGSHITPWKNFPEKTEREKIRNLFSQKLQIFAHTGESSEQRSNYISKRAVPKQITNKSKSILPKTSSKKSSFAVIIGLLIVTICAGIFLQKYKKVLast
1 -208.000 VFG043518(gi:29134931) (acm) collagen adhesin precursor Acm [Acm (VF0419)] [Enterococcus faecium str. TX2555]  ali  100  1MKKCRNIILSMLFIITNITSLIPVHVYADAGRDISSNVTSLTVDPTNITDGGNIKVKFSFDEKKQNIQPGDYLWINWPSEGNIRGEGFQKEIPLMIENKNVGTLTVRKDSAQVVFNENIKNLDSVEGWGQFEIQARNVTDTGEENTGPFTVTSGDKTATVNVTKPASGSSSSVFYYKTGDMLPEDTKHIRWFLNINNNGTYVEQPVKISDEIQSGQRLDPSTFEINQIHLGEQKVYRGEEGIQQFLQDFPSATFNFSVTDNYIEITIPKNFVNLRKIMVSYKTIIENPEQINFENHSEAWFKEFNKPAVDGESFNHTVKNISASGGVNGTVRGELKIFKYINDTEIGIPNVTFELRRADEQPIQGQSSILLTSNEQGEASIKGLQVGDYVVKEKEAPNWIDFDPLSSNELKFSINENDTEGVSLPIYNKKKVTNITATKIWNGGTTPRPSIYFKLFRASTNNWEPVPDAETKRLDNGITSVTWEDIQQYDDSGNEYTFKVQEVDQNGNDYVPSGYQKIENGLVVTNENKEVISVSGQKTWEDNENQDGKRPTTITVNLLADGQPIQHKEVSEKDDWRYRFTNLPKYRDGQEIIYTVTEDNVPEYSTTIDGYNIKNSYTPEKTNISIPGSHITPWKNFPEKTEREKIRNLFSQKLQIFAHTGESSEQRSNYISKRAVPKQITNKSKSILPKTSSKKSSFAVIIGLLIVTICAGIFLQKYKKV 721
2 -70.500 VFG001291(gi:21284341) (cna) collagen adhesin precursor [CNA (VF0005)] [Staphylococcus aureus subsp. aureus MW2]  ali follow..  27  1MNKNVLKFMVFIMLLNIITPLFNKNEALAARDISSTNVTDLTVSPTKIEDGGKTTVKMTFDDKSVKIQNGDTIKVAWPTSGTVKIEGYSKTVPLTVKGEQVGQAVITPDGATITFNDKVEKLSDVSGFAEFEVQGRNLTQTNTSDDKVATITSGNKSTNVTVHKSEAGT-SSVFYYKTGDMLPEDTTHVRWFLNINNEKRYVSKDITIKDQIQGGQQLDLSTLNINVTGTHSNYY-SGSNAITDFEKAFPGSKITVDNTKNTIDVTIPQGYGSYNSFSINYKTKITAEIKKLEDGTTKVTWSNLPENDKNGKTIKYLVKEVNAQGEDTTPEETSATVTKNWDDNNNQDGKRPTEIKELYQDGKATGKTAKLNESNNWTHTWTGLDEKAYTVEELTKVKGYTTHEYTVTEDHVKDYTTDINGTTITNKYTPGETSATVTKNWDDNNNQDGKRPTEIKVELYQDGKATGK-TATLNESNNWTHTWAGLDEKA-KGQQVKYTVEELTKVKGYTTHVDNNDMGNLIVTNKYTPETTSISGEKVWDDKDNQDGKRPEKVSVNLLANGEKVKAVDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVKDYTTDINGTTITNKYTPGETSATV--TKNWDDNNNQDGKRPTEIKVELYQDGKATGKTATNESNNWTHTWAGLDEKAKGQQVKYTVEELTKVKGYTTHVDNNDMGNLIV.......... 1087
3 -42.400 VFG002166(gi:29375675) (ace) collagen adhesin protein [Ace (VF0355)] [Enterococcus faecalis V583]  ali follow..  17  1MTKSVKFLLLLVMILPIAGALLIGPISFGAELSKSSIVDKVELDHTTLYQGEMTSIKVSFSDKNQKIKPGDTITLTLPDALVGMTENDSSPRKINLNGL--GEVFIYKDHVVATFNEKVESLHNVNGHFSFGIKTLITNSSQPNVIETDFGTATATQRLTTNTETGQIERDYPFFYKVGDLA-GESNQVRWFLNVNLNKSDVTEDISIADRQGSGQQLNKESFTFDIVNDKETKYISLAEFEQQGYGK------IDFVTDNDFNLRFYRDKARFTSFIVRYTSTITEAHQATFENSYDINYQLNNQDATNEKN-TSQVKNVFVEGEASGNQNVEMPTEESLDIPLETIDEWEPKTPTSEQATETSEKTDTTETAESSQPEVHVSPTEEENPDEGETLG----TIEPIIPEKPSVTTEENGTTETAESSQPEVHVSPTEEENPDESETLGTIEPIIPEKPSVTTEENGTTETAESSQ----------------------EVHVSPAEEENPDESETLGTILPILPEKPSVTTEENGTTETAESSQPEVHVSPTEEENPDESETLGTIAPIIPEK---------------------PSVTTEENGITETAESSQPEVHVSPTKEITTTEKKQPSTETTVEKNKNVTSKNQPQILNAPLNTLKNEGSPQLAPQLLSEPIQKLNEANGQRELPKTGTTKTPFMLIAGILASTFAVLGVSYLQIR. 672
4 -39.600 VFG001281(gi:21282247) (sdrE) Ser-Asp rich fibrinogen-binding bone sialoprotein-binding protein [SDr (VF0019)] [Staphylococcus aureus subsp. aureus MW2]  ali follow..  11  266......................QPAAVASNNVNDLIKVTKQTIKVGD-HDGKDIEYDTEFTI-DNKVKKGDTMTINYDKNVIPDKNDPIDITDPSGEVIAKGTFDKATKQITYTFTDYVDKYEDIKSRLTLYSYIDKKTVPNETSLNLTFATAGKESQNVTVDYQDPMVHGDSNIQSIFTKLDEDKQTIEQQIYVNPLKKSATNTKVGNIKLGNGSTIIDQNTEIKVYKVNSDQQLPQSNR-DFSQYEDVTSQFDNKKSFSNNVATLDFGDINS-AYIIKVVSKYTPTSDGELDIAQGTSMRTTDKYGYYNYAGYSNFIVTSNDSGGGDGTVVDKDGVQGTDSKEKPMANVLVTLTYPDG------TTKSVRTDAKGHYEFGGLKDGETYTVKFETPTGYLPTKVNGTTDGEKDSNGSSVTVKINGKDDKEPKYNLGDYVWEDTNDANEPGIKDVKVTLKDSTGKVIGTTTT---DASGKYKFTDLDN--------NYTVEFETPAGYTPTVKNTTAEDKDSNGLTTTGVIKDADGDYVWYDSNDSTEKGIKDVTVTLQNEKGEVIGTTKTDENG-KYRFDNLDS-------KYKVIFEKPAGLTQTVTNTTEDDKDADGGEVDVTITD............................................................................................ 920
5 -28.300 VFG001279(gi:21282245) (sdrC) Ser-Asp rich fibrinogen-binding bone sialoprotein-binding protein [SDr (VF0019)] [Staphylococcus aureus subsp. aureus MW2]  ali follow..  23IRKYSVGTASILVGTTLIFGLSGHEAKAAEHTNGELNQSKNETTAPS-TSSDVLKLKANYTIDD-SVKEGDTFTFKYGQYFRPGSVRLPSQYNAQGNIIAKGIYDSTTNTTTYTFTNYVDQYTNVSGSFEQVAFAKRENATTDKTAYKMEVSLGNDTYSEEIIVDYGNKKAQPLISSTNYIN-NEDLSRNMTAYVNQPKNTYTKQTFVTNLTGYKFNPNAKNFKIYEVTDQNQFVDSFTPDTSKLKDVTNQFNITYSNDNKTATVDLMNQTSSNKQYIIQQVAYPDNTSTDNGKIDYTLDTDKTKYSWSNSYSNVNGSSTDQKKYNLGDYVWEDTNKDGKQDANEKGIKGVYVILKDSNGKELD-----RTTTDENGKYQFTGLSNGTYSV-EFSTPAGYTPTTANAGTDDAVDSDGLTTTGVIKDADNMTPKYSLGDYVWYDSNKDGKQDSTEVKVTLQNEKGEVIGTTETDENG---KYRFDNLDS--------KYKVIFEKPAGLTQTGTNTTEDDKDADGGEVDVTITDHDDFTL-DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD------SDSDSDSDSDSDSD------SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDTDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS......................... 874
6 -26.600 VFG005303(gi:15900379) (rrgB) cell wall surface anchor family protein, major pilin RrgB [PI-1 (VF0529)] [Streptococcus pneumoniae TIGR4]  ali follow..  10  1MKSINK-FLTMLAALLLTASSLFSAATVFAAGTTTTSVT---VHKLLATDGDMDKIANELETGNYA--AGVMFVWNTNNEIIDENGQTLGVNIDPQTFKLSGAMPATAMKKLTEAEGAKFNTANLPAAKYKIYEIHSLSTYVGEDGATLTGSNTEAKPKIDKDFKGKANPDTPRVDKDTPVNHQVGDVVEYEIVTKIPALANYATANWSDRMTEGLAFNKGTVKVT----------VDDVALEAGDYALTEVATGFDLKLTDAGLAKVNDQNAEKTVKITYSATLNDKAIVEVPESNDVTFNYGNNPDHGNTPKPNKPNE----------NGDLTLTKTWVDATGAPIPAGAEATFDLVNAQTGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSADYQEITTAGEIAVKNWKDENPKPLDPTEPKVVTYGKKFVKVNDKDNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDALDRAVAAYNALTAQQQTQQEKEKVDKAQAAYNAAVIAANN--------------------------AFEWVADKDNENVVKLVSDAQGRFEITGL---LAG---TYYLEETKQPGYALLTSRQKFETSYSATGQGIEYTAG-------------------------------------------SGKDDATKVVNKKITIPQTGGIGTIIFAVAGAAIMGIAVYAYVKNNKD. 660
7 -24.400 VFG001280(gi:21282246) (sdrD) Ser-Asp rich fibrinogen-binding bone sialoprotein-binding protein [SDr (VF0019)] [Staphylococcus aureus subsp. aureus MW2]  ali follow..  13  245.......................KNVNDLITSNTTLTVVDADKNNKIVPAQDYLELKSQIKVDD-KVKSGDYFTIKYSDTVQVYGLNPEDIKNINGETIATAKHDTANNLITYTFTDYVDRFNSVQMGINYSIYMDADTIPVSKNDVEFNVTIGNTTTKTTANIQKNSIGSAFTETVSHVGNKENPGYYKQTIYINPSENSLTNAKLKVQAYHSSYP-EVTDIKIYQVPKGYTLNKGYDVNTKELTDVTNQYLQKITYGDNNSAVIDFGNADSAYVVMVNTKFQYTTSESPTLVQMVTLSSDNSKSASMGNALGFTNNQSGQEVYKIGNYVWEDTNKNGVQELGEKGVGNVTVTVFDNNTN----TKVGEAVTKEDGSYLIPNLPNGDYRVEFSNLPKGYEVTPSKQGNNEELDSNGLSSVITVNGKDNLSADL--GDYVWEDTNDQDEKGISGVTVTLKDENGNVLKTVTTDADG---KYKFTDLDN----GN---YKVEFTTPEGYTTTTGVINGADNMTLDSGFYKTPKYNLGNYVWEDTNDSTEKGISGVTVTLKNENGEVLQTTKTDKDG-KYQFTGLEN---G---TYKVEFETPSGYTPTQVGSGTDEGIDSNGTSTTGVIKDVWEDTNDKDEKGISGVTVTLKDENDKV--KTVTTDENGKYQFTDLNN............................................ 959
8 -24.100 VFG005297(gi:25011519) (pilB) major subunit PilB [PI-2a (VF0528)] [Streptococcus agalactiae NEM316]  ali follow..  1MKKINKCLTVFSTLLLILTSLFSAPAFADDVTTDTVTLHKIVMPQAAFDNFTE-DLKSYFGSTDAKEIKGAFFVFK-GTKFITENGKEVDTLEAKDAEGGAVLSGLTKDTGFAFNTAKLK------GTYQIVELKEKSNYDNNGSILADSKANTETKPQVDKNFADKDLDYTDNRKDKGVVSATVGDKKEYIVGTKILKGSDYKKLVWTDSMTKGLTFNNNVKVTLDGK---------DFPVLNYKLVTDDQGFRLALNATGLAAVAAAAKDKDVEIKITYSATVNGSTTVEVPETNDVKLDYGNNPTEESEPQEGTPAN-------QEIKVIKDWAVDGTITDVNVAVKAIFTLQEKQTDGTWVNVASHEATKPS---------RFEHTFTGLDNTKTYRVVERVSGYTPEYVSFKNGVVTIKNNKNSNDPTPINPSEP----------------KVVTYGRKFVKTNQANTERLAGATFLVKKEGKYLARKAGAATAEAKAAVKTAKLALDEAVKAYNDLTKEKQEGQEGKTALATV-KQKAYNDAFVKANYSYEWVADKKADNVVKLISNAGGQFEITGL---DKG---TYSLEETQAPGYATLSGDVNFEVTATSYSKGATTDIAYDKGSVKKD---------------------------------------AQQVQNKKVTIPQTGGIGTILFTIIGLSIMLGAVVVMKKRQSE. 672
9 -23.700 VFG002202(gi:38232859) (spaD) SpaD-type pili major subunit SpaD [Pili (VF0364)] [Corynebacterium diphtheriae NCTC 13129]  ali follow..  10  1MKKNSLTIRSVTFAAVAGLSLGISAPGAVAIAEEGTQVQQTQRANIDFERKGSLTLHKKKGAESEKRATGKEMDLNFDLQNGDWAKFPKTAADAKGHETSTTKEVETSGNGTAVFDN---------GIYLVEETKAPDGIVTGAPFIVSIPMVNEASDAWNYNVVAYPKNTETKTEKTVKDADQNQDAYTYTIKADWGKDKKLTAFRFEDELDKRLDFQKVT----EVKAGDTVLGTSDYTVNDPATDGNKLVVTLTDEG--------KKVKSGDKMSLTFEVKRKEVGNTTELKNRADVIFNNPNTDKEVKNKTNEVVTYHGK----------KVVKKDGKEAGKVLKGAEFELYQCTSAAVLGKGPLTLHVTDFEDGKEAAPATKKFCLKETKAPAGYALPDPNVTEIEFTRAKISEKDKFEGDDEVTLVSEIKNIKQ......................................................................................................................................................................................................................................................................................... 453
10 -22.600 VFG043509(gi:29376997) (fss2) Enterococcus faecalis surface protein Fss2, fibrinogen binding protein [Fibrinogen binding protein (AI272)] [Enterococcus faecalis V583]  ali follow..  1MKKKTFSFVMLSILLAFGFAVNAYAVTTTEAQTTDELLDSMSLAPIGELNTTPVTATFQFAVGNTGYAPGSVYTVQLPEHLGYSTVS--------TGIGATWAVDAATKTLSITFNQRVSD-------TSFKVELKSYLTTEAEPLIKIETPGKNKKTSFDLYEQVEPIQYNERTRT-----TGLDGEIFYNLDRTLTGNQTLELLTTETPGAVFGKQDNLEPQVFSYDVDINGQILPETQTLLTPGKDYTLSDN---SLGRIAVTVPNMNQQ-KAYSLSINRTIYLESASDYNYLYSQQYPTTKIGSISLKSTTGSKGKYYVTIYGTLTETKVGQQIVLESTNGQEIKNPKFTAYGPLYENVKLEDYFDIKTEG--KLTLTATKDSYLRINISDLTMDFDKKDINLSLSTPVIGPNKAIQLVSDQYIEPISVVNPLNAEWGNYDQNGAYSSRTTVSVMGSKEKPIQNLEIKVKHPN-----YLSLRATKEIYFYYKLGTDYTVTPTSDGSVIKFTTPITNEIQIPIGFNYVPDSLPKDKSIPVD--------------------TIPITMSAEGLT---VDTTVTTNSKRGSERTLQSSKNQFLVNARNDSFDSLSVRTKIP.................................................................................................. 701
11 -21.900 VFG042976(gi:29375667) (ebpA) endocarditis and biofilm-associated pilus tip protein EbpA [Ebp pili (VF0538)] [Enterococcus faecalis V583]  ali follow..  13  742.............................................................................................................................................................................................................................................................................................................................................DLKVIKNSSSGEKNLVGAVFELS---GKNVQTTLVDNKDGSYSLPKDVRLQKGERYTLTEVKAPAGHELGKKTTWQIEVSEQGKTNQVIPLEIENKFSSLPIRIRKYTMQNGKQVNLAEATFALQ--KNAQGSYQTVATQKTDTTGLSYFKISEPYDTLAGNYEFTVDKYGKIHYAGKNIEENAPEWTLTHQN-NLKPFDLTVNKKADNQTPLKG-----AKFRLTGPDTDIELPKDGKETD-TFVFENLKP-------KYVLTETFTPGYQGLKEPIELI-----------------------------------IREDGSVTIDGEKVADVLISGEKNNQITLDVTNQAKVPLPETGGIGRLWFYLIAISTFVIAGVYLFIRRPE. 1100
12 -21.800 VFG000948(gi:21909640) (fbaB) fibronectin-bing protein SfbII [FBPs (VF0243)] [Streptococcus pyogenes MGAS315]  ali follow..  22  99.......................................................................................................................................................................................................................................................................................................................................................................................................TDIDKYEDVQFDPQDTNLQAVISVEPVIESLPWTSLKPIAQKDITAKKIWVDAPKEKPIIYFKLYRQLPGEKEVAELKQINSEGQQEISVTWTNQLVTDEKGMAYIYSVKEVDKNGELLEPKDYIKKEDGLTVTNEEDSATHIKFSKRDIDGKELAGA-----TMELRSSGKTIS----------TWISDGQVKDFYLMPGKYTFVETAAPGYEVA-TAITFTVNEQGQVTTTKIEDSKVGGQGQIVETTEDTQTGMHGDSGRKTEVEDTKLVQDNKEPESNSEIPKKDKSKSNTSLPATGEKQHNKFFWMVTSCSLISSVFVISLKSK. 650
13 -21.200 VFG002206(gi:38234766) (spaH) SpaH-type pili major subunit SpaH [Pili (VF0364)] [Corynebacterium diphtheriae NCTC 13129]  ali follow..  11  5RTTIGRRLACAVGASALILSGAGFAAPALAQTEPSANVAAANYGNIDFTKQGRIIINKHLHQEDGSSANGVTFKIKIKNIDLSKQEGWEAVNKYNIPADPTKDDNLKEVDTVTTANGGKATTKDLSVAAYVVYETDAPADVIDRASPFVVTRTNTWLYDVNVFPKNGKTKLNKTVEMQNTYGLNVGSEVHFPVTAVVAEDKVFKYFQVIDPMDPRFDQESLGVESVTLN-------GKALESDDYTVAGDGSRVIVSLTSQGLG---KLKNAAGQELKVVFKGKLKSLDNGKPEEFGRILNQAYVYSDTESNPGQSTPPST---------------------------------------------------------------------------------PPIWPVTTPPDTPPVTTTPPGGTPLVKQFWGDLRILKVDKGDGKTG-------------------------------------------EGAKFKIYPATKPYPENGTCGPEYDKNAPVQVNGTGNGNDLVVTSD----------------------KNG--------------NVHFEGLFVSDDQND-CYVLVETEAPGFVTPKDGTVFPVAVKIGQTATTTYDAKV-----------------------------------------------ENVKRDTPDLPLTGGKGVLFLMIAGGLLLLVAVGAGFVFVRR. 552
14 -21.000 VFG005291(gi:25011516) (pilC) minor subunit PilC [PI-2a (VF0528)] [Streptococcus agalactiae NEM316]  ali follow..  12  30.......................................................................................................................................................................................................................................................................................................................................NADTPNQLTITQIGLQPNTTEEGISYRLWTVTDNNQKYKSILTSPTDTNGQTKIA-LPNGSYFGRAYKADQSVSTIVPFYIEIP---DDKLSNQLQINPKRKVETGRLKLIKYTKEGKIKKRLSGVIFVL-------------------------------YDNQNQPVRFKNGRFTTDQDGIT---------------------------------------------------------SLVTDDKGEIEVEGLLP---G---KYIFREAKALGYRISMKDAVVAVV-ANKTQEVEVENEKE--------------------------------------TPPPTNPKPSQPLFPQSFLPKTGMIIGGGLTILGCIILGILFIFLRKTKNS. 300
15 -20.700 VFG001282(gi:21284149) (fnbB) fibronectin-binding protein B [FnBPs (VF0010)] [Staphylococcus aureus subsp. aureus MW2]  ali follow..  11  9IRKHKLGAASVFLGTMIVVGMGQEKEAAASEQNNTTVEESGSSATER-HNAERVTLKYKWKFEDG-IKPGDYFDFTLSNNVETPLRKVPDIKSKDDNILAVGKVM-DERKIRYTFTDYINNKNNLMAELNLNLFIDPTTVTKQGKQTVEVKLGENKSKEFDIKYDGVKDNWGVTVNGRITLLDKENSKIHHLAYINPKKSDMTS-ITINGFFAKGGLYTGNVPTVKVYEYLRSDELPESVYANEKFKDVTNDMSDKLTLSENGSYKLTLDALNKKSYVVSFEGKYNENDKELLFRTNLHGYHANYGYYYYYPVSLTWDNGVAFYSNNAQGDGKDKPNDPIIEELDIKSEPPVEKHELTGTIEESNDSKPIDFEYHTAVEGVEGHAEGIIETEEDSIHVDFEESTHENSKHHADVVEYEEDTNPGGGQVITESNLVEFDEE-DTKEYTTESNLIELVDELPEEHGQAQGPIEEITENNH-EDTEEDKPKYEQGGNIVDIDFDSVPQIHGQNKGDQSFEEDTEKDKPKYEHGGNIIDIDFDSVPHIHGFNKHTEIIEEDTNKDKPNYQFGGHNSVDFEEDTLPQVSGHNEGQQTI-TPPTPEVPSEPETPTPPTPEVPSEPETPTPPTPEVPAEPGKPVPPAKEEPKKPSKPVEQGKVVTPVIEINEKV-----KAVAPTKKAQSKKSELPETGGEESTNKGILFGGLFSILGFALLRRNKK. 939
16 -20.700 VFG042977(gi:29375668) (ebpB) endocarditis and biofilm-associated pilus minor subunit EbpB [Ebp pili (VF0538)] [Enterococcus faecalis V583]  ali follow..  10  122...................................................................................................................................................................................................................................................................................................................................................................................VVSFSLASKDSQQRDKAYLFVEAEAPEVVKEKASNLVVILPVQDPQGQSLTHIHLYPKNEENAYDLPPLEKTVLDKQQGFNQPESIEVKVAGKTVTTGYTLTTQKHGFTLDFSIKDLQNFANQTMTVSLEKTAEPDTAINNEGQLVTDKHTLTKRATVRTGGKSFVKVDSENAKIT----PEAVFIVKNQAGEYLAKKFTSNQAGEFSVKGL---KDG---QYFLEEISAPGYLLNQTEIPFTVGKNSYATNGQRT---------------------------------------------APLHVINKKVKESGFLPKTNEERSIWLTIAGLLIIGMVVIWLFYQKQK. 471
17 -20.700 VFG043508(gi:29374740) (fss1) Enterococcus faecalis surface protein Fss1, fibrinogen binding protein [Fibrinogen binding protein (AI271)] [Enterococcus faecalis V583]  ali follow..  12 1299.......................VETKAPAGYLLNTEPSAFTIAASDRGKPATVIATANFVNYQGTAKSGATFKV----------------LDAKGETIQTGLTTNNQGEIVA---------EHLAGKYRFETKAPTGYLLNTTPVPFEIAEKNAGKPAVVVASDNFVSYKGAFQIVKTNSADQPLAGAVFELYDHNKQSLGITATSGKDGKIIFRDLAPGTYYYKEIK-FKGDPEIFQLGAFANFKGRAVFKKIDANANPLPGTIFKLYRIENGEKIFEREVTAEKDGSLAMEDLGAGSYELDELDATDGYIVNKQPIYFVVKKNSNDKQPQAEVMGRKVNEQGQTLAGAVFAIYNADEQNQAGEKVSEITTDKTGEIYAKGLNEGHYVLVETKAPTGYLLDTTLHP---FDVTAQLGKEQPIALGDLINYQGTAQLTKENETGEALAGAVFKVI----ETGQTVDGQT-NLMSDKQGKVIAKNLAP----GT---YRFVETQATSYLIAKDNQGKPATVVLKAPFINYQGAAKLVKIDQQKNALAG-----AEFKVTAETGQTVARSLRSDNQGLVQVNHLQP---G---KYTFVETKAPGYQLSKQAVAFTIAATAKDKPELVNAGTFVNEKQPVSKKTKPN---------------------------QPTTKQAARETGWLGLPKTNTQVNYFFVFIGLMLVGLASWLFYKKSKK. 1987
18 -19.600 VFG001283(gi:21284150) (fnbA) fibronectin-binding protein A [FnBPs (VF0010)] [Staphylococcus aureus subsp. aureus MW2]  ali follow..  190........................KVETGTDVTSKVTVESGSIEAPQ-HAGQRVVLKYKLKFADG-LKRGDYFDFTLSNNVNTYGVSTARKVPKNGSVVMATGEILGNGNIRYTFTNEIEHKVEVTANLEINLFIDPKTVQSNGEQKITSKLNGEEEKTIPVVYNPGVSNSYTNVNGSIETFNKESNKFTHIAYIKPMNGNQSNTVSVTGTLTEGSNLAGGQPTVKVYEYLGKKDELPQSVYANTSDTNKFKDVTKEMNQDNGSYSLNLDKLD-KTYVIHYTGEYLQGSDQVNFRTELYGYPERAYKSYYVYGGYRLTWDNGLVLYSNKADGNGKNGQIIQNNDFEYKEDTAKGTMSGQYDAKQIIETEENQDNTPLDIDYHTAIDGEGGYVDGYIETIEETDSSAIDIDYHTAVDSEAGHVGGYTESSEESNPIDFEES-EDTKEYTTESNLIELVDELPEEHGQAQGPIEEITENNHHISHSGLGTENGHGNY---VIEEIEENSHVDIKSELGYEGGQNSGNQSFEEDTEEDKPKYEQGGNIVDIDFDSVPQIQGQNNGNQSFEEDTEKDK--DIDFDSVPQIHGFNKHTEIIEEDEVPSEPETPTPPTPEVPSEPETPTPPTPEVPSEPETPTPPTPEVPAEPGKPVPPAKEEPKKPSKPVEQGKVV-KAVAPTKKAQSKKSELPETGGEESTNKGMLFGGLFSILGLALLRRNKK. 1011
19 -19.500 VFG002201(gi:38234577) (spaA) SpaA-type pili major subunit SpaA [Pili (VF0364)] [Corynebacterium diphtheriae NCTC 13129]  ali follow..  11  106.........................................................................................................................................................................................................................................................................................................................................................DAASKIKLEELYTNGHPTDKVTKVATKKTEGGVAKFDNLTPALYLVVQELNGAEAVVRSQPFLVAAPQTNPTGDGLQDVHVYPKHQALSEPVKTAVDPDATQPGNVKYRVATKIPINSTDVSVQTYQVGDRTVLSVQLAGLDQHKDQELVVEFPVTKQPENGQLDNQAWGDAALRGMPSSRVSSKFGQITIEKSFDGNTPGA----RTATFQLHRCEAD-GKQEFVTGQDGKAVLSGIHLGTLQLE-EFCLVETATAGYELLPKPVIVKLEANESTNVLVEQKVKI----------------------------------------------DNKKKNAGFELPLTGGSGRIAITIGIVGLLVALASYVLSRRKD. 523
20 -19.400 VFG002200(gi:38234575) (spaB) SpaA-type pili minor subunit SpaB [Pili (VF0364)] [Corynebacterium diphtheriae NCTC 13129]  ali follow..  1.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MKNNAINATVLSLALTTPAHAQEANTLVIDLEPPAAFADDQPQGHNIDVTVAKLHNIDPEDHERIRALQRNGVPSTISEEQPHTARTDATGTATITNLPP---G---TYVIRDTNTTK-----RFSPLVIPLGIDTTSPTMTLRPKLIDATPGAPNVPSVPS-------------------------PPSVTSPAPKKTPPRLAFTGASILGLLAIATISTLIGIALLRTRRAEK. 203
21 -19.000 VFG002207(gi:38234767) (spaG) SpaH-type pili minorsubunit SpaG, pilus tip protein [Pili (VF0364)] [Corynebacterium diphtheriae NCTC 13129]  ali follow..  10  798......................................KTEDATRDTNEATGEFKVE--------DLPYGKWREVEAPDGYRIVGANAYEFTVNKAKKVPGGAIKNYKARIEWSKVDAADEKNALAGS-EWQLT-----GPDGKELSVKDCVASECVPEVNDIDPGKG-------------------------KFSVAELGNGEYTLKETKAPEGYLVTEKTYTFK--------------------------------------------------------------------TDTGYSIDGNTEKKFPVPSSGTNYIPLSIGGITNDKDAAKVHWSKVDAAATSTLGGSEWSIVPKTSTGALDEVNAEKDTNTAAGEFTVELPLGTYVLKETKAPAGYLVSDEAKNGKEFTLTRDNLTKVLESVTNKKIEAGVTWKKV-DATDATKLLGGSEWTITPYKADGTLNAAGVLDEDPVAGQFKINALP-----GK---YRLEETKAEGYVTVDDSKAGAVVDLDAIKNERMDGVVTWTKLDQSGKALHSSE--QVTDCQADAASKCTEPDIDPAGG-AFKVDGLE----G---EYKLVESKAPGFVVDTTEHYFTISKNGEEIVA----------------------------------------------------AFKNELGKGVKLPLTGGLGAFKFLIAGLGVLSAAMGGAHVMRRR. 1373
22 -19.000 VFG005305(gi:15900380) (rrgC) cell wall surface anchor family protein, minor pili RrgC [PI-1 (VF0529)] [Streptococcus pneumoniae TIGR4]  ali follow..  10  45.......................................................................................................................................................................................................................................................................................................................................PSRDGHRLQVWKLDDSSYDDRVQIVRDLHSWDENKLSSKKTSFEMTFLENQIEVSHIPNGLYYVRSIIQTDAVSYPA---EFLFEMTDQTVEPLVIVAKKTDTMTTKVKLIKVDQDHNRLEG---VGFKLVSVARDVSEKEVPLIGEYRYSSSGQVGRTLYTDKNGE--NYRFKEVEVTTLDTDVQLVDHQLVTITVVNQKLPRGNVDFMKV----DGRTNTSLQGAMFKVMKEESGHYTPVVTSGKDGRFRVEGLE--------TYYLWELQAPGYVQLTSPVSFTIGKDTRKELVTVVKNNK---------------------------------------------------RPRIDVPDTGEETLYILMLVAILLFGSGYYLTKKPNN.. 393
23 -18.700 VFG001289(gi:21282493) (clfA) Clumping factor A, fibrinogen-binding protein [Clumping factor (VF0004)] [Staphylococcus aureus subsp. aureus MW2]  ali follow..  18  220......................VAADAPAAGKDITNQLTTVGIDSGD-HQAGYVKLNYGFSV-PNSAVKGDTFKITVPKELNVTSTAKVPPIMAGDQVLANGVID-SDGNVIYTFTDYVDTKENVTANITMPAYIDPENVTKTGNVTLTTGIGSTTNKTVLVDYEKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLLKPNTDSNALIDQQNTSIK............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 433
24 -18.600 VFG042978(gi:29375669) (ebpC) endocarditis and biofilm-associated pilus major subunit EbpC [Ebp pili (VF0538)] [Enterococcus faecalis V583]  ali follow..  10  1MKQLKKVWYTVSTLLLILPLFTSVLGTTTAFAEENGESAQLVIHKKKMTDLPDPLIQ----------NSGKEM-------------------------------------------SEFDKYQGLAD-VTFSINVTNEFYEQRAAGASVDAAKQAVQSLTPGKPVAQGTTDANGNVTVQLPKKQNGKDAVYTIKEEPKEGVVAATNMV-------------------------------------------VAFPVYEMIKQTDGSYKYGTEELAVVHIYPKNVVANDGSLKKVGTAENEGLNGAEFVISKSEGSPGTVKYIQG--------------VKDGLYTWTTDKEQAKRFITGKSYEIGENDFTEAENGTGELTVKNLEVGSYILEEVKAPNNAELIENQTKTPFTIEANNQTPVEKTVKNDTSKQISVNIPLGIADKEGDANKYVKFNLVDKHDAALTFDNVTQVTEQANGFTVAVNPAYIPTLTPGGYFMHLNEKADKGFKNEANVDNGHTDDQTPPTVEVVTGGKRFIKV--DGDVTATQALAGASFVVRDQKTKAEATTFTTTADGLVDITGL---KYG---TYYLEETVAPDYVLLTNRIEFV-------------------------------------------------NEQSYGTTENLVSPEKVPNKHKGTLPSTGGKGIYVYLGSGAVLLLIAGVYFARRRKE. 623
25 -18.300 VFG042971(gi:225860989) (pitA) minor pilin PitA [PI-2 (VF0530)] [Streptococcus pneumoniae Taiwan19F-14]  ali follow..  10  1....................................MIDTPYWFTSGLERGML-------NISSLIAPKIDGFSIKFIGSNDSITSLKGYISGYNSGIPNEIFSANNENDLQQKFKEITDKILPLG-----------------------------------------------------------------------------HHVTISDVLSKYVQLLPGDASHLRVVKIKDGNEQELNDNQVTIETKKNEQGLVEVT---AKFNPSYTLEDDAKYVLKFTVTSSQEAFDAIAGDKTLTSDDAEEADATKLYSNKGAKVAYSYGIGTSRTKIKDYSEKPTFKPSDPLT-KGVDGKSNPSANRPPSVELNLNQKKDGSIK-TNSFTENTSFAKVAKGYDYELKAPDAPGYTVEVQKTGTKEKPSFKVIYRQLPSLTVKKILEGEQSPNKSFTINVTLSDKDGKPINGKFGNTTVTNGKAQISLKNSQETALSYRDTHYKVEEVENSRTGYHVTQEGTLSEDVQTIVTNHRLPTLSVTKK--TGAFANLLQSFKITINVKDAQNK-GKATVDLKKDKTIKILDLPL------ARYSIEEEASSGYQVSYDKKEGTLD---ANKSATVTNNK-------------------------------------------------------NSVPETGIDFLSSTLVLGVVLPLGGIFFIIVNRRK. 586
26 -18.200 VFG005277(gi:25010688) (gbs0628) major subunit protein [PI-1 (VF0527)] [Streptococcus agalactiae NEM316]  ali follow..  12  1MKKLLFSAAVLTMVAGSTVEPVAQFATGMSIVRAAEVSQTVNIYKIENKDGEVISNYAKLGDNVKGLQGVQFKRYKVKTKLTTVEAADAKVGTILEEGVSLPQKTNAQGLVVDALDS---------VRYLYVEDLKNSPSNITKALPVANSTGTGFLSEINIYPKNVVTDEPKTDKDVKKLGQDDGEEFKWFLKST-ANLGDYEKFEITDKFADGLTYKSVGYTIDEPTVDNQNTLKITFKPEKFKEIAELLKGMTLVKNQDALDKATANTDDAAFLEIPVASTINEKAVLAIENTFELQYDHTPDKADNPKPSNPPRKPE--------VHTGGKRFVKKDSTETQTLGGAEFDLLASDGTEAVTGQPIKLKSHTDGTFEIKGLTAVTYKLKETKAPEGYVIPDKEIEFTVSQTSYNTKPTDITVDSADATPDTIKNNK.......................................................................................................................................................................................................................................................................................... 517
27 -17.700 VFG043510(gi:29376424) (fss3) Enterococcus faecalis surface protein Fss3, fibrinogen binding protein [Fibrinogen binding protein (AI273)] [Enterococcus faecalis V583]  ali follow..  10  5IFKKWRLFAALALLGQTIVGAIDPMIVFADEIAHPQTVTVELDLAHQYVVEGTF----------------------------------------------------SDGRPMSEVTVPHYAVYNGVKQDVFCIEPGVPIDNEFTPGYEKNPLPDMPEKAKLVSVLWKKAGTDVDTH---------AQKMIWQE--------VNGYTLHSIKRLNGSAVNIAAIEAKNQAIADYQKKPSFHNSTAKIVLGQSTTMTDTNNLNLSEFDEVVENTANIDYRVNGNQLIITPNASSKESGVLTLKKSAGTGTPVAYKKVGQQTLMAGAIDKDVETEGSLKIKKVDKESGAIVPGTVFHLDFGKTLPAK-----DVTTDKEGIATLDGIPHGKVTITEKSVPAPYTIDTIP-----MTATIKAGETIFMTSKNTREKGQIILDKTGIETGSDLWNDNYSLA---KDSPTGEIVQEMTTDEKGH-KEIANALE-----GT---YYVTETKASNVKVELKYANQTVALVTSNQNQEITGETTLIKEDKDTGDQGRAVFEGTEYTLFTAKDGKAVKTLALDEKNQAAVKHLA----N---EYYWQETKAPGYTLDETKYPVSIKKVDDNEKNAVITRDV-KFAGSAAGTAETGFNDLTFKVSPLEGTNEITGAEDEAITAYNEQLGFDGYGKFENLPEVEAPEGFQK...................... 684
28 -17.200 VFG005289(gi:25010692) (gbs0632) tip adhesin protein [PI-1 (VF0527)] [Streptococcus agalactiae NEM316]  ali follow..  10  1MKKRQKIWRGLSVTLLILSQIPFGILVQGETQDTNQALGKVIVKKTGDNGKATFVLEATFE----NIKPGDYTEETAPIGYKKTDKTWKVKVADNGATIIEGMDADKAEKRKEVLNAQYPKSAIYEDTKENYPLVNVEGSKVGE----------QYKALNPINGKDGRREIAEGWLSKKITGVNDLDKNKYKIELTVEGKTTVDVVVLLDNSNSDKITSNKDNRVALVTYASTIFDGTEATVSKGVADQNGKALNDSVSWDYHKTTFTATTHNYSYLNLTNDANEVNILKSRIPKEAEHINGDRTLYQFGATFTQKALMKANEILETQSSNARKKLIFHVTDGVPTMSYAINFNPYISTSYQNQFNSFLNKIPDRSGILQEDFIINGDDYQIVKGDGESFKLDPKTKKVSATKQIKTHGEPTTLYFNGNIRPKGYDIFTV-VDDTNKIYDELNKYFKTIVEEKHSIVDGNVTDPDKTSQTIKINHLNLGSGQKVVLTYDLKDNYISNKFYNTNNRTTLSPKSEKEPNTIRDFPIPKIRD-KVNKDKHSESLLGAKFQLQIEKDVPEGSDVTTKNDGKIYFKAL---QDG---NYKLYEISSPGYIEVKTKPVVTFTIQNGEVTNLKADPNANKNQIGYLEGNGKHLITNT------------------------------PKRPPGVFPKTGGIGTIVYILVGSTF--MILTICSFRRKQL 890
29 -17.000 VFG001290(gi:21284280) (clfB) Clumping factor B, adhesin [Clumping factor (VF0004)] [Staphylococcus aureus subsp. aureus MW2]  ali follow..  13  204......................VVNAADAKGTNVNDKVTDFQLEKTTFNQSGNTFMAANFTVTGQ-VKSGDYFTAKLPDSVTGNGDVDYSNVNDKNEVVAKATYDILTKTYTFVFTDYVNDKQNINGKFSLPLFTDRAKAPKSGTYDANINIADEMFNN.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 353
30 -15.800 VFG005299(gi:25011520) (pilA) tip adhesin PilA [PI-2a (VF0528)] [Streptococcus agalactiae NEM316]  ali follow..  12  664...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................RGLNLGEGQKVTLTYDVKDPNTLRDFPIPKIRDVREYPTITIKNEKKLGEIEFTKV---DKDNNKLLLKGATFELQEFNED-NNSKVVTGENGKISYKDL---KDG---KYQLIEAVSPDYQKITNKPILTFEVVKGSIQNIIAVNKQISEYHEEG---------------------------------DKHLITNTHIPPKGIIPMTGGKGILSFILIGGSMMSIAGGIYIWKRYK. 891
31 -15.700 VFG000949(gi:21909634) (cpa) fibronectin-bing protein SfbI [FBPs (VF0243)] [Streptococcus pyogenes MGAS315]  ali follow..  16RRQTTIGLLKVFLTFVALIGIVGFSIRAFGAENKQSSVQDYPWYSKGYPDYSPLKTYHNLKVNLDGSKEYQAYCFNLPSKSDSVRSQWYKKLEGTNENFIIEDGQLQQNILRILYNGYPNDRNGIMKGI--------------DPLNAILVT----------------------------------QNAIWYYTDSSYISDTSKAFQQEET----------------------------------DLKLDSQQLQLMRNALKRLINPKEVESLPNQVPANYQLSIFQSSDKTFQNLLSAEYVPDTPPKPGEEPPAKTEKT------------SVIIRKYAEGDYSKLLEGATLKLAQIEGSGFQEK-----IFDSNKSGEKVELPNGTYVLSELKPPQGYGVATSYDHGANIDPDVSESKEIKYTHVSGYDLYKYAATPRDKDADFFLKHIKKILDKGYKKKGDTYKTLTEAQFRAATQLAIYYYTDSADLTTLKPNSSRYQALIGTQYHPNELIDVISMEDKQAPIIPITHKLTISKT--TGTIADKKKEFNFEIHLKSSDGQAGKATFTLKDGESLIVEGLPS------YSYEITETGASDYEVSVNGKNAPDGKATKASV-----------------KEDETVAFE---------------------------------NRKDLVPPTGLTTDGAIYLWLLLLVPFGLLVWLFGRKG. 741
32 -15.600 VFG002203(gi:38232861) (spaE) SpaD-type pili minor subunit SpaE [Pili (VF0364)] [Corynebacterium diphtheriae NCTC 13129]  ali follow..  11  43....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LSDQPGVSRDYGTDTLSITLSPGNGDPVNPATGKVAGVTIKLQRGWPTDRTIKAVTNEAGQVRFQGLEK---G---IYLVTSQAPAGAAAGISPFLVAVPFHTVADNPRPVEGVIVAKTNSTVPPTTPP--------WTPPTTPSTPPPGHTPPLRETPGSGDEKEREQGDLALTGVQIIGLVLAAVALMGAGLLMLLITKKRK. 260
33 -15.000 VFG005301(gi:15900378) (rrgA) cell wall surface anchor family protein, pilus tip adhesin RrgA [PI-1 (VF0529)] [Streptococcus pneumoniae TIGR4]  ali follow..  11  626.............................................................................................................................................................................................................................................................................................................................................................................................................................................................NDGSRLENGQAVGGPQNDGGLLKNAKVLYDTTEKRIRVTGLYLGTDEKVTLTYNVREQNTVRDFPIPKIRDVRKYPEITISKEKKLGDIEFIKV----NKNDKKPLRGAVFSLQKQHPDYPDQNVRTGEDGKLTFKNL---SDG---KYRLFENSEPGYKPVQNKPIVAFQIVNGEVR-------------------------------DVTSIVPQDIPAGYEFTNDKHYITNEPIPPKREYPRTGGIGMLPFYLIGCMMM---GGVLLYTRKHP 893
34 -14.900 VFG042970(gi:71909925) (fctB) minor pilin FctB [pilus (VF0531)] [Streptococcus pyogenes MGAS5005]  ali follow..  13  31.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ASINIEVINQVDVATNKQSSDID---ETFMFVIEALDKESNSVTTSVKGNGKTSFEQLTFSEVG-QYHYKIHQLKNSQYHYDETVYEVVIYVLYNEQSGALETNLVSNKLGETEKSELI--------------KQEYSEKTPEPHQPDTTEKEKPQKKRNGILPSTGEMVSYVSALGIVLVATITLYSIYKKLKT. 213
35 -14.000 VFG005233(gi:71909921) (cpa) fibronectin-binding protein, GAS pilus tip adhesin [pilus (VF0531)] [Streptococcus pyogenes MGAS5005]  ali follow..  26.KNSKRFTVTLVGVFLMIFALVTSMVGAKTV----GLVESSTPNAINPDSSSEYR--YGYESYVRNLEGSRSYQVAFPLGSDSSVKKWYKKHDGISTKFEITGDELNQKLRAVMYNGHPQNANGIMEGL--------------EPLNAIRVT----------------------------------QEAVWYYSDNAPISNPDESFKRESESNLVSTSQLSLMR----------------------------QALKQLIDPNLATKMPKQVPDDFQLSIFESEDKGDKYNKGYQNLLSGGLVPTKPPTPGDPPMPPN----------QPQTTSVLIRKYAIGDYSKLLEGATLQLTGDNVNSFQ-----ARVFSSNDIGERIELSDGTYTLTELNSPAGYSIAEQIENPNKEIVEPYSVEAYNDFEEFSVLTTQNYAKFYYAKNKNGSSQVVYCFNADLKSPPDSEDGGKTMTPDFTTGEVKYTHIAGRDLFKYTVKPRDTDPDLIGTQWHPEDLVDIIRMEDKKEVIPVTHNLTLRKTVTGLAG-DRTKDFHFEIELKNNKQELGKATINLKHGESLTLQGLPE------YSYLVKETDSEGYKVKVNNATVSKTGITSDETLAFENNK-------------------------------------------------------EPVVPTGVDQKINLALIVIAGISLGIWGIHTIRIR. 759
36 -13.800 VFG002204(gi:38232862) (spaF) SpaD-type pili minor subunit SpaF, pilus tip protein [Pili (VF0364)] [Corynebacterium diphtheriae NCTC 13129]  ali follow..  448........IAVVADLSTSLKYADSNGFDESKKAANALIDSLAGTPAELG--------YNFAGGAPRNPAGSTISLQSDDGVSRAKSIVSNWNGNGSTNAGLKQVAAGNYDVVYFITDGMPTYSSKAPQLGLGGEFVQESALNQAIDAANELKAAGTRVVPIMVDLTVGGKNAQHTTVTQDLVLKNVRFWK-----TSNSEPGLYFQFTNKYVDAASYVGDDTTANFEIAYKNGGFKVWERTSRGRNIDVTRDQSKWTYGPREVKTMGEDISGTGDTIRVEQYSQLAAQMKKIGEELALRCNGVVKVKKRIVDENGRAIEDGVPGWEFTLSAGGQDIIDPGNGDRVRKSLKAT-----SSANEDRGTASWNIMSEQEQQLTLVETQQPGFNLYKRNDKNAVCTETRDGVMKPIEVTNDGEFGFKVKMRAKDKKLSSVSCVVDNYKQPETPPGKLTFKKAQYNGDKIEEIPGL--------------------GGATFEIYPSK---------------------------------------------------------GDQPDYSAEALYTIKPGQESIEVK---TTG---TFFLVETKAPGLNLLAQPVKFEISVDETTKKYKISVGSTSSGQVQAKGEGDKMI--------------------------------TVADTTAGELPKTGGYGVGLVGLIGVALAG--AGFLLGRRKTA 1039
37 -13.100 VFG042973(gi:225860991) (pitB) major pilin PitB [PI-2 (VF0530)] [Streptococcus pneumoniae Taiwan19F-14]  ali follow..  233............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................SQVDPNAKALTITKK--DGASGDKTRDFQFHIKIQLPSTNKVEYNFTLKDGETFTVEQLPA------SKYTVTETGVAGY-----TDSSIYTTNGAEQTSQGQKNVDFTLTDILIGEKKNDNKVT---------------------------------NKIDDVTPTGLLIDNLPFILMIGLGLAGFVVLSKKRREA 413
38 -12.600 VFG006768(gi:16802365) (vip) surface adhesin Vip [Vip (VF0443)] [Listeria monocytogenes EGD-e]  ali follow..  10  146...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NELFLNNNPTGTILTITDQNAINAVQEQINT-------VTSSEKESFQEQLNNAQQQLDARIAQEQAAIQAVNQLFLEDSPVNSIKAETTQD-QTLVDVLPASELKDTLQANIVKAQ-PVTPVDPATPIPDEPSTPTDPATPEKPEITTPENPESTVVEADSSENEPEKSADSKIVNNPIQITSQATKTATKQAKSSATKTTLPLPKAGDTETTSSILFGTLML---SSLVLFKRKK. 399
39 -12.500 VFG043504(gi:15902119) (pavB/pfbB) cell wall surface anchor family protein, Plasminogen- and Fibronectin-binding protein B [PavB (VF0524)] [Streptococcus pneumoniae R6]  ali follow..  15  961...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LKASDKAPWSDNGDAKNPALSPLGENVKTKGQYFYQLALDGNVAGKEKQALIDQFRANGTQTYSAT---VNVYGNKDGKPDLDNIVATKKVTIKINVKET-SGSGVTPMNHNHATGTTDSMPADTMTSSTNTMAGENMAASANKMSDTMMSEDKAMLPNTGETQTSMASILGLALAGLLGGLGLKNKKE. 1159
40 -12.300 VFG042968(gi:71909923) (fctA) major pilin FctA [pilus (VF0531)] [Streptococcus pyogenes MGAS5005]  ali follow..  12  17...................................................................................................................................................................................................................................................................................................................................................................................................................................AATTVHGETVVNGAKLTVTKN-VNSNALIPNTDFTFKIEPDTTVNTYTNSDKGGSNTKTAEFDFSEV-TFEKPGV-YYYKVTEEKIDKVPTYIVGYKEGSKVPIQFKNSLDSTTLTVKKK--SGTGGDRSKDFNFGLTLKANQYY-QLYHFTLKDGESIKVTNLPV------VDYVVTEDDYKSEKYTTNVEVSPQDGAVKNIAGNSTEQETSTDKDMT-------------------------------------------TNKKDFEVPTGVAMTVAPYIA-LGIVAVGGALYFVKKKNA 340
41 -12.200 VFG045350(gi:16080160) (bslA/yuaB) hydrophobin BslA [BslA (VF0411)] [Bacillus subtilis subsp. subtilis str. 168]  ali follow..  10  1MKRKLLSSLAISALSLGLLVSAPTASFAAESTSTKAHTESTTITGASKTEWSFSDIELTYR-PNTLLSLG-VMEFTLPSGFTANTKDT-----LNGNALRTTQILNNGKTVRVPLALDLLGAGEFKGTYTFRAENKSL....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 153
42 -11.700 VFG001331(gi:76787513) (bca) C protein alpha-antigen [  ali follow..  285......................TVEVTYPDGTKDTVEVT-VHVTPKPVPDKDKYD-----TGGETTVPQGTPVSDKEITDLVKIPDGSKGVPTVVGDRPDTNVPGDHKVTVEVTYPDGTKDTVEVTVHVTPKPVPDKDKYDPTGGETTVPQGTPVSDKEITDLVKIPDGSKGVPTVVGDRPDTNVPGDHKVTVEVTYPDGTKDTVEVTVHVTPKPVPDKDKYDPTGGETTVPQGTPVSDKEITDLVKIPDGSKGVPTVVGDRPDTNVPGDHKVTVEVTYPDGTKDTVEVTVHVTPKPVPDKDKYDPTGGETTVPQGTPVSDKEITDLVKIPDGSKGVPTVVGDRPDTNVKVTVEVTYPDGTKDTVEVTVHVTPKPVPDKDKYDPTGGETTVPQGTPVSDKEITDLVKIPDGSKGVPTVVGDRPDTNVPGDHKVTVEVT---PDGTKDTVEVTVHVTPKPVPSDKEITDLVKIPDGSKGVPTVVGDRPDTNVPGDTVEVTYPDGTKDTVEVTVHVTPKPVPDKDKYDPTGGETTVPQGTPVSDKENVPGDHKVTVEVTYPDGTKDTVEVTVHVTPKPVPDKDKYDPTGGETTVP-PVSDKEITDLVKIPDGSKGVPTVVGDRPDTNVPGDHKVTVEVTYPDGTKDTVEVTVHVTPKPVPDKDKYDPTG---------KAQQVNGKGNKLPATGENATPFFNVAALTIISSVGLLSVSKKKE. 1019
43 -11.700 VFG001319(gi:151221254) (isdC) iron-regulated surface determinant protein C [Isd (VF0015)] [Staphylococcus aureus subsp. aureus str. Newman]  ali follow..  11  1MKNILKVFNTTILALIIIIATFSNSANAADSGTLNYEVNDTSIANDYFNKPAKYIKK------------NGKLYVQI----TVNHSHWITGMSIEGHKENIISKNTAKDERTSEFNGKIDGKIDVDHHYNITYKFNGPTDVAGANAPGKDDKNSASGSDKGSDGTTTGQSESNSSNKDKVENPQTNAGTP................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 197
44 -11.400 VFG000960(gi:15675290) (grab) protein GRAB (protein G-related alpha 2M-binding protein) [GRAB (VF0254)] [Streptococcus pyogenes M1 GAS]  ali follow..  11  113.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VKADNAASDALEALADQTDALQSEEAEVVQSDNAASDAWEKAATPIALDVKKTKDTKPVVKKEERQNVNTLPTTGEESNPFFTAAALAIMVSTGVLVVSSKCK. 215
45 -10.900 VFG001795(gi:37572662) (cba) c protein beta antigen [  ali follow..  14  914...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTVRVFDLSLSK---GGKETHVNGERTVRLALGQTGSDVHVYHVKENG----DLERIPSKVENGQVVFKTNHFSL---------FAIKTLSKDQNVTPPKQTKPSTQGSQVEIAESQTGKFQSKAANHKALATGNETVAKG-----------NPTSTTEKKLPYTGVASNLVLEIMG-LLGLIGTSFIAMKRRK. 1082
46 -10.800 VFG001318(gi:151221253) (isdA) iron-regulated surface determinant protein A [Isd (VF0015)] [Staphylococcus aureus subsp. aureus str. Newman]  ali follow..  42.....................................................................................................................................................................................................................................................................................................................................................................................................................QQVNAATEATNATNNQSTQVSQATSQPINFQVQKDGSSEKSHMDQHPGKVIKQ---NNKYYFQTVLNNAS-------WKEYKFYNANNQELATTVVNDNKKADTRTINVAVEPGYKSLTTKVHIVVPQINYNHRYTTHLEFEKAIPTLADAAKPNNVKPVQPKPAQPKTPTEQTKPVQPKVEKVKP-----TVTTTSKVEDNHSTKVVSTDTTKDQTKTQTAHTVKTAQTAQEQNKVQTPVKDVATAKSESNNQAVSDNKSQQTNKVTKHNETPKQASKAKELPKTGLTSNFISTVAFATLALLGSLSLLLFKRK. 347
47 -9.880 VFG002171(gi:29374799) (EF0149) aggregation substance [AS (VF0352)] [Enterococcus faecalis V583]  ali follow..  11  918........................................................................................................................................................................................................................................................................................................................................................................................................DDPKPTKAVHNKKGEDINHGKVARGDVLSYEMTWDLKGYDKDFAFDTV-DDYDETKVTPIKDLLRVKDSKGADITNQFTISWDDAKGTVTISAKDPQA-GGQELRVTLVSGDVYNSAEQNTFGQRIKTNTVVNHIPKVNPKKDVVIKVGDKQSQNGAT-EKFFYEF--TSSDIPAEYAGVVEEWSIS-DDISKLFEQGVVKITASQAFLDAMNLKEN--DVYNTIEESFNNEKIKTNTVVTHTPEKPQTPPE--------------KTVIVPPTPKTPQAPVEPLVVEKASVAPELPHTGEKENTLLSVLGAGMLVGLAWFGLKKREV. 1304
48 -9.800 VFG041277(gi:52841559) (legT) Dot/Icm type IV secretion system effector LegT [Dot/Icm (SS047)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]  ali follow..  26MKYSTRIIITTILLLFTLMGYAGKDPISAQSSVGQTYTVTYTFTNQERSASPNTEFNFNDQCSGRLLNSGESCEVVVPLV-------------------------IGLKTLQLTIAGYSKDRVPLPQTSTLSTGQSLSPIVSFVMDGFPSQLATGSVSSYKFTFTNNGAISAT------------------NLSVNVSQSLGTPNYTTTTLTPNGGVCEVDGTYTVTAGNPSIQQVIASLSYTGPSGSPVTAQTFTQVVNPAAPLVGTLVPPNYLPPLMIAGNQYTVQFLFTASGTVDITNNGTITCLEGVNNCNGTINITSSSCTPQTLTNAACQMTATFTAPAANNPPRTYALTATVPYSVGGNPQAPATAITSGTVLAALPTERTVTLINE--------------------------------------------DVWFSLNGSQLGSSPNCPTTPCPNGTSCNTST-----------------------NKCFWNNPTPINGIYLLAALPGVN------TNSVTIPVTNADPNIQWSGN----------ISASTLCNGTTCQQAACGNAGGTTSCAPGIGFTQPATQAEITMNLTTSDSYDVEINGFHIPISMQP...................................................................................................... 547
49 -9.790 VFG001295(gi:21282660) (sspB) staphopain cysteine proteinase SspB [Staphopain (VF0006)] [Staphylococcus aureus subsp. aureus MW2]  ali follow..  13  5YKSRVFNIISIIMVSMLILSLGAFANNNKAKADSHSKQLEINVKSDKVPQKVKDLAQQQFNAKTGKYELGEAFKI-YP----IKDGKIVYTLTLSPKNKDDLNKSKEDMNYSVKIAKDLDQIKDKNSNITVLTDEKGFYFEEDGKVRLVKATPLPGNVKEK................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 188
50 -9.470 VFG036884(gi:15676785) (pilK) pilin-like protein may involving in pseudopilus formation [Type IV pili (CVF189)] [Neisseria meningitidis MC58]  ali follow..  1MRKQNTLTFALFIVLMVMIVVAFLVVTAAQSYNTEQRISANESDR-----------KLALSLAEAALREGEL......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 71
51 -9.400 VFG002172(gi:29375113) (EF0485) aggregation substance [AS (VF0352)] [Enterococcus faecalis V583]  ali follow..  13  915.......................................................................................................................................................................................................................................................................................................................................................................................................PDDPKPTKAVHNKKGEDINHGKVARGDVLSYEMTWDLKGYDKDFAFDTV-DDYDETKVTPIKDLLRVKDSKGVDITNQFTISWDDAKGTVTISAKDPLAHGGQELRVTLVSGDIYNSAEQNTFGQRIKTNTVVNHIPK-------------------VNPKKDVVIKVGDKQSQNGATIKLGEKFFYEFTSIPAEYAGVVEEWSISDDDISKLFTRIAAGDVYNTIEESFNNETIKTNTVVTHTPEKPQTPPE--------------KTVIVPPTPKTPQAPVEPLVVEKASVEPELPQTGEKQNVLLTVAGSLAAMLGLAGLGFKRRK. 1302
52 -9.110 VFG002164(gi:29377905) (prgB/asc10) aggregation substance PrgB/Asc10 [AS (VF0352)] [Enterococcus faecalis V583]  ali follow..  13  915.......................................................................................................................................................................................................................................................................................................................................................................................................PDDPKPTKAVHNKKGEDINHGKVARGDVLSYEMTWDLKGYDKDFAFDTV-DDYDETKVTPIKDLLRVKDSKGVDITNQFTISWDDAKGTVTISA-LAYGGQELRVTLPTKVKADVSGDVYNSAEQNTFGQRIKTNTVV--------------NHIPKVNPKKDVVIKVGDKQSQNGATIKLGEKFFYEFTSIPAEYAGVVEEWSISDDDISKLFTRIAAGDVYNTIEESFNNEKIKTNTVVTHTPEKPQTPPE--------------KTVIVPPTPKTPQAPVEPLVVEKASVVPELPKTGEKQNVLLTVVGSLAAMLGLAGLGFKRRK. 1302

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;