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current user: public |
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| Query: VFG0777 (gi:11527914) orf6.2 - unknown [Escherichia coli E2348/69], from VFDB |
| . 10 . 20 . 30 . 40 . 50 | |||||||
| # | Score | Template | Links and tools | %id | First | MDTCKIGPGLYQYTSVDDCTRYRVLRLYSCRTAVNSLDFIDCVIEEMPFPI | Last |
| 1 | -11.300 | PF13610.1; B5WJN4_9BURK/77-216; DDE domain | ali follow.. | 17 | 6 | VDETYLGRWVYLYRAVDRAGQTVDFMLRAKGDVKAAKGFFRKALKH..... | 54 |
| 2 | -8.290 | PF00665.21; O89811_FLV/1485-1601; Integrase core domain | ali follow.. | 12 | 11 | VDFTGMYGYKYLLVFIDTFSGWAEAYPAKHETAKVVAKKLEEIFPRYGIP. | 65 |
| 3 | -5.980 | PF03400.8; INBD_SHIDY/1-131; IS1 transposase | ali follow.. | 13 | 7 | MDVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLL........ | 54 |
| 4 | -5.370 | PF02914.10; TRA_HAEIN/267-485; Bacteriophage Mu transposase | ali follow.. | 16 | 30 | ........RPKTWLWQDVRTRKVLARTDKSENTDTIRLSLLDVISRYGLP. | 72 |
| 5 | -4.660 | PF08164.7; A3GIA8_PICST/412-493; Apoptosis-antagonizing transcription factor, C-terminal | ali follow.. | 9 | 39 | IDTKASKGRKLKFQVQEQIANFETPRESWRWDDNQIDEFFASLL....... | 82 |
| 6 | -4.400 | PF06021.6; GLYAT_BOVIN/1-205; Aralkyl acyl-CoA:amino acid N-acyltransferase | ali follow.. | 28 | 167 | ..........FKLSSVDPSHAAVVNRFWLFGGNERSLRFIERCIQSFP... | 204 |
| 7 | -4.330 | PF05184.10; Q9FRW6_NEPAL/376-414; Saposin-like type B, region 1 | ali follow.. | 17 | 5 | .............TACEMAVVWIQNQLRREVTKEKVLNYINELCDSLP... | 39 |
| 8 | -3.910 | PF09344.5; Q8Z464_SALTI/7-353; CT1975-like protein | ali follow.. | 8 | 214 | .EQGFASALFYTYVCISRDLLVENLGGNEELAKRTIAALTETALTVSP... | 260 |
| 9 | -3.850 | PF06072.6; US9_EHV1V/160-218; Alphaherpesvirus tegument protein US9 | ali follow.. | 31 | 3 | ...........................YSESDNETASMFIRRV........ | 18 |
| 10 | -3.850 | PF01610.12; Q0W142_UNCMA/157-393; Transposase | ali follow.. | 17 | 3 | VDIAYEKGHKYLTVVRDVEKG-CVLWTGIGRKEVTLDLFFAILGYEKSMNV | 53 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Doukhanina EV, Chen S, van der Zalm E, Godzik A, Reed J, Dickman MB. Identification and functional characterization of the BAG protein family inArabidopsis thaliana. Biol Chem. 2006 Jul 7;281(27):18793-801. Epub 2006 Apr 24. |