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Query: VFG000865(gi:387604907) (aap/aspU) Dispersin [Dispersin (VF0215)] [Escherichia coli O44:H18 042], from VFDB

Results of FFAS03 search in COG0516
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .
# Score Template Links and tools%idFirst MKKIKFVIFSGILGISLNAFAGGSGWNADNVDPSQCIKQSGVQYTYNSGVSVCMQGLNEGKVRGVSVSGVFYYNDGTTSNFKGVVTPSTPVNTNQDINKTNKVGVQKYRALTEWVKLast
1 -7.140[S] COG4939 Major membrane immunogen, membrane-anchored lipoprotein  ali follow..  12  1MKLKKVAMGITVVMASSLLLVGCGSSDDSSKDKKSTDTKQTETKKTAKTDGTMTDGTYKLEEKNFDDKGSIEVKDGKITKAN.................................. 87
2 -6.830[N] COG5567 Predicted small periplasmic lipoprotein  ali follow..  14  1MKNVFKTLAVLLTLFSLTGCGLKGPLYFPPADKNA................................................................................. 35
3 -6.760[S] COG3111 Uncharacterized conserved protein  ali follow..  14  1MKKFAAVIAVMALCSAPVMAAEQGGFSGPSATQSQAGGFQGPNGSVTTVESA-TWVTLRGNIVERISDDLYVFKDASNVDIDHKRWNGVTVTPKDTVEIQGE.............. 110
4 -6.540[S] COG3126 Uncharacterized protein conserved in bacteria  ali follow..  13  6PKALWQIVGGAALAVSLTGCAHQSAEAPVAAPISTATVAASVAQSTVHGTVNIRE-ISLADAPSRVIAQKAVRTEGKQAPFTSDIQPNARVIVSAAITRNGQ.............. 129
5 -6.360[I] COG2134 CDP-diacylglycerol pyrophosphatase  ali follow..  16  1MKKTGYFLLAVIVIVAAAGVGYWKFSGNPDIVLEQCLPDQLQH----QNPAPCAEVPRAGYVVFKDRHGPLQYLLMPTYRINGTESP............................. 88
6 -6.320[S] COG3755 Uncharacterized protein conserved in bacteria  ali follow..  12  2LLRTMMIAAALLCLAPVAAQAQAEDGVSFSPDYDRCREKPENDNT--PGILRCDARLNKAYKA-----------------------------DMADLKDSPAAKAALLKAQRAWIA 94
7 -5.880[E] COG1045 Serine acetyltransferase  ali follow..  15  154..........IMLDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIG--AGAKILGNIEVGRGAKIGAGSVVVPPHTTAAGVPARIVGKPDSDK......... 251
8 -5.660[S] COG3085 Uncharacterized protein conserved in bacteria  ali follow..  18  14.........................................................NKHYPRGFSRHGDFTIKEAQLLEDLGKREPVTEEEKLFVAVCRGEREPVTEAERV-WSK 80
9 -5.590[P] KOG0474 Cl- channel CLC-7 and related proteins (CLC superfamily)  ali follow..  16  167...LLFRTLIGKIFGSIGSVGGG-GKEGPLVHTGACIHLNSRWPQLFKSDRDRRDLVTCGCAAGVAAAGGVLFALEEVTSW................................... 263
10 -5.560[E] KOG4750 Serine O-acetyltransferase  ali follow..  14  193..........ILLDHATGVVIGETAVVGDNVSILHGVTLGGTGKQSGDRHPKIGDGVLIG--AGSCILGNITIGEGAKIGSGSVVVPARTTAVGNPARLIGGKE............ 287

FFAS is supported by the NIH grant R01-GM087218-01
8 5 9 5 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Ma H, Xiong H, Liu T, Zhang L, Godzik A., Zhang Z. Aggregate formation and synaptic abnormality induced by DSCR1. J Neurochem. 2004 Mar;88(6):1485-96.