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anford Burnham Prebys Medical Discovery Institute
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Query: d2esna2 c.94.1.1 (A:92-303) Probable LysR-type transcriptional regulator PA0477 {Pseudomonas aeruginosa [TaxId: 287]}, from SCOP206

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst FVPGQSQRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAERKLSVEALASGRIDFALGYDEEHERLPEGIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGSTDFLLTAPRHAARALAEAAGLALYPAPFDIPPYVLRLYSHVQHVGRDAHAWMIGQLKGLDLast
1 -6.530sp|O00585|CCL21_HUMAN(removed signalp:1-23) C-C motif chemokine 21 OS=Homo sapiens GN=CCL21 PE=1 SV=1  ali follow..  15  17..............................................................................................................................................................IPAKVVRSYRKQEPSLGCSIPAIL--FLPRKRSQAELCADPKELWVQQLMQHLD 68
2 -6.280sp|Q6IPT2|F71E1_HUMAN Protein FAM71E1 OS=Homo sapiens GN=FAM71E1 PE=2 SV=2  ali follow..  13  70......................PKPALGGAGEVEPGGMAASPTGRPRRLQRYLQSGEFDQ--------------FRDFPIFESNFVQFCPDIYPAPTSDLWPQV-----RLGEVANEVTMGVAASS----------ALELPDLLLLAGPNGHLQLFGLFPLKFVQLFVHDKSRCQLEVKLNTSTFYLQLRAPLKTRDREFGQWVR....... 229
3 -6.210sp|Q02779|M3K10_HUMAN Mitogen-activated protein kinase kinase kinase 10 OS=Homo sapiens GN=MAP3K10 PE=1 SV=3 (Range: 151-450)  ali follow..  16  10................LRGACLNPPHLCLVMEYARGGALSRVLAGRRVPPHVLVNWAVQVARGMNYLHNDAPVPIIHRDLKSINILILEAENHNLADTVLKITDFEWHKTTKMSAAGTYAWMAPEVIRLSLFSKSSDV----------VLLWELLTGEVPYREIDALAVAYGVAMNKLTLPIPS--LEECWDPDPHGRPDFGSILKRLEVIE 211
4 -6.210sp|Q8WUX2|CHAC2_HUMAN Cation transport regulator-like protein 2 OS=Homo sapiens GN=CHAC2 PE=2 SV=1  ali follow..  17  29......SRRFWQGSTDHRGVPGKPGRVVTLVEDPAGVAYRLPVGKEEEVKAYLDFREKG---GYRTTTVIFYPKDPTTKPF-SVLLYIGTCDNPDYLGPAPLEDIAEQ--------------IFNAAGPSGRNTEYLFELANSIRNLVPEEADEHLFALEKLVKERLEGKQNLNCI.................................... 184
5 -6.200sp|Q99731|CCL19_HUMAN(removed signalp:1-21) C-C motif chemokine 19 OS=Homo sapiens GN=CCL19 PE=1 SV=1  ali follow..  12  10...........................................................................................................................................................LSVTQKPIPGYIVRNFHYLLIKDGCRVPAVVFTTLRGRQLCAPPDQPWVERIIQRLQ 66
6 -6.010sp|Q8TB52|FBX30_HUMAN F-box only protein 30 OS=Homo sapiens GN=FBXO30 PE=1 SV=3 (Range: 451-745)  ali follow..  10  2YHIDVGTQTFSLPSAILATSTMVGEIAS-----ASACDHANPQLSNPSPFQTL---GLDLVLECVARYQPKQRSMFTQLFRRKEFSSHFKNVHGDIHAGLN--TYSQRR--FCPSIQGAKIIHDRHLRSFGVQPCVSTVLVEPARNCVLGLHNDHLSSLPFEVLQHIAGFLDGFSLCQLSCVSKL-VILQWGKRKYPEGNSSW......... 223
7 -6.010sp|Q8NEG0|FA71C_HUMAN Protein FAM71C OS=Homo sapiens GN=FAM71C PE=2 SV=1  ali follow..  11...............................TAQSSPAMGMFNTSMGKLQRQLYKGEYTI--------------FRYAPMFESDFIQISKRGEV-------IDVHNRARMVTMGIVRT----------------SPCLTLPDVMLLARPAAVCELTRLLPLMFVKITIHNSVKKQLHLKLATGSFYLQLCPPSDASEDLFVHWEN....... 168
8 -5.940sp|A6NMB9|FIGL2_HUMAN Putative fidgetin-like protein 2 OS=Homo sapiens GN=FIGNL2 PE=5 SV=2 (Range: 451-653)  ali follow..  12  4.........LRLRGATLAAP-LLQAAFAAARCRPPSV---------------LLISELEALLPARDDGAAAGGALQVPLLACDGVLVVGTTSRPAALDEATRRRFSLRFYVALPDSPARGQILQRALAQQGCALS---ELAALVQGTQGFSGGELGQLCQQAAAGAGLPEAALAKVGPRASAKELDSFVEWDKMYGSG.............. 202
9 -5.920sp|Q008S8|ECT2L_HUMAN Epithelial cell-transforming sequence 2 oncogene-like OS=Homo sapiens GN=ECT2L PE=2 SV=2 (Range: 1-300)  ali follow..  2..................................................................................ESFHTRFSAWTPFSNKSLNRQLFQERVALISHTNKQRQEFLFAIFLRCTKSQ--LRFVQDWFSERMQVAKVDFSTVLPRFISLYI-----FSFLSPKDLCAAAQVSWPWKFLTEQD--CLWMPKCVK... 124
10 -5.830sp|Q16584|M3K11_HUMAN Mitogen-activated protein kinase kinase kinase 11 OS=Homo sapiens GN=MAP3K11 PE=1 SV=1 (Range: 151-450)  ali follow..  14  29................LKAVCLEEPNLCLVMEYAAGGPLSRALAGRRVPPHVLVNWAVQIARGMHYLHCEALVPVIHRDLKSNNILLLQPESDDMEHKTLKITDFEWHKTTQMSAAGTYAWMAPEVIKASTFSKGSDV----------VLLWELLTGEVPYRGIDCLAVAYGVAVNKLTLPIPS--MADCWAQDPHRRPDFASILQQLEALE 230

FFAS is supported by the NIH grant R01-GM087218-01
1 1 4 9 9 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.