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d1tena_
Query: d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]}, from SCOP175

Results of FFAS03 search in SCOP175
Master-slave alignment does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90
# Score Template Links and tools%idFirst RLDAPSQIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFTTLast
1 -53.100d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors  100  1RLDAPSQIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFTT 90
2 -49.700d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  26  1.LDSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQST 89
3 -48.500d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  24  2.IDRPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQST 90
4 -47.800d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  27  1..PAPTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTT 88
5 -46.500d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  32  2.LEAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPG--GQTQEILLPGGITSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTT 88
6 -46.300d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  22  1.VPPPTDLRFTNIGPDTMRVTWAPPPIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKT 90
7 -46.100d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}  ali model 3D-neighbors follow..  22  1.VGSPKGISFSDITENSATVSWTPPRSRVDSYRVSYVPITG-GTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPISGILKT 88
8 -46.000d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  23  2.VSPPRRARVTDATETTITISWRTKTETITGFQVDAVPANG-QTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDAST 89
9 -45.900d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}  ali model 3D-neighbors follow..  31  1..DNPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPS--GKKNEMEIPVDSTSFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGST 86
10 -45.900d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  21  4.RPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLQRELMVPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTART 100
11 -45.600d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}  ali model 3D-neighbors follow..  22  1.IDAPKNLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMNART 91
12 -45.400d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  19  6.VPQLTDLSFVDITDSSIGLRWTPLNSSIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQT 95
13 -44.100d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  21  1.....RDLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASSKPISI 85
14 -43.200d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  24  1.PDGPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPP--LQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPNLTSPASITFTT 87
15 -42.600d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}  ali model 3D-neighbors follow..  23  1.LDSPRDLMVTASSETSISLIWTKASGPIDHYRITFTPSSGIS--SEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLESTVDA.. 85
16 -40.700d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  25  1..SGPVEVFITPSQPNSHPIQWNAPQSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTT 91
17 -40.200d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  22  2.LSPPTNLHLEANPDGVLTVSWERSTTPITGYRITTTPTNGQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIP 93
18 -39.700d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  1DLGAPQNPNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQG-DSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSVSCRT 90
19 -38.300d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  18  16.PGPPSKPQVTDVTKNSVTLSWQPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMS... 104
20 -38.100d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  14  11.PGPVGHLSFSEILDTSLKVSWQEPNGILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTISS 102
21 -38.000d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  20  11.PSAPRDVVASLVSTRFIKLTWRTPAGDNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSALRVET 104
22 -37.200d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  21  2.VAGPYITFTDAVNETTIMLKWMYINTPIHGFYIYYRPTDSDNDSKKDMVEGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSNMICET 98
23 -37.000d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  3.PSEPGRLAFNVVSSTVTQLSWAEPNGEITAYEVCYGLVNDDNRKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINL 99
24 -36.900d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  1.PSAPKLEGQMGEDGNSIKVNLIKQDSPIRHYLVRYRALSSE-WKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRT 91
25 -36.600d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  20  21.PGPPMGILFPEVRTTSVRLIWQPPNGIILAYQITHRLNTTTANTATVELAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVT 113
26 -36.600d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  10EPDIPNPPRIANRTKNSLTLQWKAPSSKIQNFVLEWDEGKGNGEFCQC-YMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYY 101
27 -36.600d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  20  2.MMPPVGVQASILSHDTIRITWADNSTDSRYYTVRWKTNIPANT-KYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMAHGTT 97
28 -36.100d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  19  18.LSNIVKPVASDIQARTVVLTWSPPSPELYGYEVLISSTGKDGKYKSV-YVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFT 117
29 -36.000d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  1.PSTVPIMHQVSATMRSITLSWPQPNGIILDYEIRYYEKE-HNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGMCFQT 92
30 -36.000d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}  ali model 3D-neighbors follow..  19  7.MPVPELLEIEEYSETAVVLHWSLASHLITGYYAYYRPSSSAGEYFKATIGAHARSFKIAPLETATMYEFKLQSFSAASASEFSA..... 95
31 -36.000d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  21  10..GPPMDVTLQPVTSQSIQVTWKAPNGVIRGYQIGYRENSPGSNGQEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSINATT 107
32 -35.400d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  11  11.PGPPTNLGISNIGPRSVTLQFRPGKTSISRWLVEAQVGVVGEGEEQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPS... 104
33 -35.300d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  20  11.PGQPLNFKAEPESETSILLSWTPPSDTIANYELVYKDGEHGEEQRITI--EPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAISART 99
34 -35.300d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  16  11.PEAPDRPTISTASETSVYVTWIPRGFPIQSFRVEYKKLKKVGDWILAAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPS... 101
35 -35.300d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  20  11.PGPAPNLRAYAASPTSITVTWETPNGEIQNYKLYYMEKGTDKEQ---DVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPVAVRT 100
36 -35.200d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  18  13..AAPQNLSLEVRNSKSIMIHWQPPNGQITGYKIRYRKASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDLSAET 106
37 -35.200d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  20  7.GLSPPRGLVAVRTPRGVLLHWDPPEKRLDGYVLEGRQGSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVS 98
38 -35.200d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  14  16..VAPGNVRVNVVNSTLAEVHWDPVRGHLQGYRIYYWKTQSSSEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFN 115
39 -35.000d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  19  1.PSMPASPVLTKAGITWLSLQWSKPSDEGISYILEMEEETSGYGFKPKY-DGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFT 92
40 -34.900d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  11.PHAPEHATLSTVERRAINLTWTKPFSPLIRYILEMSENNAPWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDT... 101
41 -34.600d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  1.PDQCKPPQVTCRSATCAQVNWEVPLTDVTEYRLEWGGVEGS---MQICYCGPGLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACV 89
42 -34.600d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  24  21.PEVPSSLHV-RPLVTSIVVSWTPPNIVVRGYAIGYGIGSPHA--QTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVT 109
43 -34.300d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  15  17.PNPPFDLELTDQLDKSVQLSWTPGNSPITKFIIEYEDAMHKPGLHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEAS... 106
44 -34.200d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  22  1.PGRP-TMMISTTAMNTALLQWHPPKGELLGYRLQYCRADEARP-NTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGLGEEFEKEIRT 90
45 -34.000d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  22  2.TSAPQHLTVEDVTDTTTTLKWRPPDGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVVGVNIAGRSEPATLL... 91
46 -33.500d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}  ali model 3D-neighbors follow..  12  6..KNPDNVVGQGTEPNNLVISWTPMNAPNFHYYVSWKRDIPAAAWENNNIDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVG 99
47 -33.200d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  15  16.DVLVRLHNPVVLTPTTVQVTWTVDPQFIQGYRVMYRQTSGLQAQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVR 110
48 -32.900d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  19  13..SPPKDVTVVEGKPKTIIVNWQPPNGKITGYIIYYSTDVNAHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEVQFRT 108
49 -32.700d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  13  3..NELLKFSYIRTSFDKILLRWEPYWRDLLGFMLFYKEAPYQNLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYIYVQT 123
50 -32.600d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  15  3.SLSGLSLKLVKKEPRQLELTWAGSRGGNLSYELHVLNQD-----EEWHQMVLEPRVLLTKLQPDTTYIVRVRTLTPLGPGPSPDHEFRT 91
51 -32.400d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  14  5.DDIVGPVTHEIFENNVVHLMWQEPNGLIVLYEVSYRRYGDEELHLTRKHFALERGCRLRGLSPGN-YSVRIRATSLAGNGSWTEPTYFY 97
52 -31.900d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  13  10KPGIPVKSVKGKIHSHSFKITWDPPKATINKYVVEMAEGSNGNKWEMIY-SGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQ 103
53 -31.700d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}  ali model 3D-neighbors follow..  15  2...PPTPPNVTRLSDESVMLRWMVPRLPIVIFKVQYRMVGKRKNWQTTNELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTS... 100
54 -31.600d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  15  16.LSKPHPPVVGKVTHHSIELYWDLEQQGPQEQWLRFEEEDPKMHSYGVIYTGYATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVA 110
55 -31.000d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}  ali model 3D-neighbors follow..  13  6.PNAPKLTGI-TCQADKAEIHWEQQGSPILHYTIQFNTSFTPASWDAAEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHS... 94
56 -30.900d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  18  2TPSSPSIDQV-EPYSSTAQVQFDEPEVPILKYKAEWRAVGEEVWHSDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFK 97
57 -30.600d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  20  4KPNPPHNLSVINSLSSILKLTWTNPSVIILKYNIQYRTKDASTWSQPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKG......... 91
58 -30.600d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  10  8.PGAPSTVRI-SKNVDGIHLSWEPPTGNILEYSAYLAIRTAQMQDTSCTVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQ 113
59 -30.400d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  19  3.IDPPGKPVPLNITRHTVTLKWAKPEFKITSYIVEKRDLPNGRWLKANFSNILENEFTVSGLTEDAAYEFRVIAKNAAGAISPPS..... 90
60 -29.300d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  16  11.PAPPQDVTVQGVTPATIRVSWRPPVANVTGYGVYA---KGQRVAEVIFPTADSTAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVP 106
61 -28.300d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  12  2.PGPCLPPRLQRPKAKEIQLRWGPPLSPISCYSVEMSPIEKDEPREVYQ--GSEVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDIT 93
62 -27.800d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  19  1QPDPPANITVTAVAPRWLSVTWQDPHSWRLRFELRYRAERSKTF-TTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQG......... 87
63 -27.700d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  11  2NPSVPLDPISVSNSSSQIILKWKPPNGNITHYLVFWERQAEDEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYV 190
64 -27.500d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  19  1KPRAPGNLTVHTNVSDTLLLTWSNPYPPDNTYAVNIWSENDPADFRIYNVTYLEPSLRISTLKSGISYRARVRAWAQAYNT......... 89
65 -27.500d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  13  18.PSQPPGNVVWNATDTKVLLNWEQVESEVTGYKVFYRTSSQNNVQVL----NTNKTSAELVLPIKEDYIIEVKATTDGGDGTSSEQIRIP 107
66 -26.600d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  20  2RLMAPISLQVVHVETHRCNISWEISQAS--EFEARTLSPGHTEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKPLQGEFT........ 89
67 -26.100d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  4LLDAPVGLVARLADESGVVLRWLPPPETPMTYEVDVSAGNGAGSVQRVEILEGRTECVLSNLRGRTRYTFAVRARMAE............ 86
68 -26.000d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  10  2IPWAPENLTLHKLSESQLELNWNNRLNHCLEHLVQYRTDWDHSWTEQSVD--YRHKFSLPSVDGQKRYTFRVRS................ 74
69 -25.100d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  14  1KLEPPMLQALDSHQPGCLWLSWKPWKPS--ECELRYQPQLKGANWTLVFLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPG......... 91
70 -24.500d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  4.PEKPKNLSCIVNEGKKMRCEWDGGRET-TNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINF.. 92
71 -23.400d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  16  5QPPEPRDLQI-STDQDHFLLTWSVALGSPQEFEVVYKRLQDSEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSR......... 94
72 -23.200d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  12  5QMAPP-SLQVTK-DGDSYSLRWETMKMRYETFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRV................ 80
73 -23.100d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  16  7KPDPPENVVARPVPSNPLEVTWQTPSTWPDKFFLRYRPLILDQWQHVEL--SNGTAHTITDAYAGKEYIIQVAA................ 86
74 -22.700d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]}  ali model 3D-neighbors follow..  16  4.PTAPTNLASTAQTTSSITLSWTASTDNVTGYDV---------NGTALATTVTGTTATISGLAADTSYTFTVKAKDAAGNVSAASVSVKT 88
75 -22.600d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  19  1.PDPPIALNWTLLNHADIQVRWEAPRNAVLEYELQYKEVNETKWKMMDPI--LTTSVPVYSLKVDKEYEVRVRSKQRN............ 88

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Li W, Godzik A. VISSA: a program to visualize structural features from structure sequence alignment. Bioinformatics. 2006 Apr 1;22(7):887-8. Epub 2006 Jan 24.