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d1iura_
Query: d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}, from SCOP175

Results of FFAS03 search in SCOP175
Master-slave alignment does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .
# Score Template Links and tools%idFirst MHHHHHHLVPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQNADRASRRTFLast
1 -58.200d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors  100  1MHHHHHHLVPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQNADRASRRTF 88
2 -44.000d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  18  6.....SGMALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADMEECMQKFIEIDQAWKILETKKKYDLQRSGPSSG.. 94
3 -42.300d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  26  1.............AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKE-AEAKFKEIKEAYEVLQKRAAYDQYGHAAFEQ.. 75
4 -29.700d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}  ali model 3D-neighbors follow..  6..........SRADKERLLELLKLPRQLWGDFMQQAYKQQSLLLHPDKGGS-----HALMQELNSLWGTFKYNLRMNLGGTGF..... 78
5 -27.900d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}  ali model 3D-neighbors follow..  21  33...............ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQEQYAKMIFMELNDAWSEFGQKPLY............ 98
6 -27.200d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}  ali model 3D-neighbors follow..  12  3..........MREESLQLMDLLGLERSAWGNLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEKYAHQPDFGGFWDATE. 79
7 -22.200d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  15  2................DYFTLFGLPARLDTQALSLRFQDLQRQYHPDKFASEQLAAVQQSATINQAWQTLRMRAEY............ 70
8 -7.820d1o17a2 c.27.1.1 (A:71-343) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}  ali model 3D-neighbors follow..  14  34VAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKELVNKTAQYYHP------------AMKNVANVRKTLGIRTIFNILG........ 107
9 -7.800d2elca2 c.27.1.1 (A:66-329) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]}  ali model 3D-neighbors follow..  10  39VAKHGNRAASSRAGSADLLEALGVDLEAPPERVGEAIEELARVFHP------------AMRHVAPVRAELGVRTVFNLLG........ 112
10 -6.790d1jkwa2 a.74.1.1 (A:162-287) Cyclin H (mcs2) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  13  81....RTCLSQLLDIMKSMRNLVKKYEPPRSEEVAVLKQKLDRCHSAEL........................................ 124

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Ye Y, Osterman A, Overbeek R, Godzik A. Automatic detection of subsystem/pathway variants in genome analysis. Bioinformatics. 2005 Jun 1;21 Suppl 1:i478-i486.