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Query: gi|16763408|ref|NP_459023.1| exochitinase (STM0018) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] (Range: 1-699), from S.typhimurium

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MATSKLIQGDTITETTHAANGFDPATSDDKISYTSARVAKPVYNKYKNSTTKPKVFGYYTDWSQYDSRLQGNMSQPGRGYDLTKVSPTAYDKLIFGFVGITGFRKIDTEDRDVVAEAAALCGKVKYEPTFLDPWGDFQSYINLGFDVSGWDVDPKTVTQSNAKGLLGALRDMQAKAKAAGHTLALSMSIGGWSMSNGFHETAASDSSRKIFAKGVVKLFKQFPMFSEVDIDWEYPNNEGAGNPFGPEDGANYALLIAELRKQLDSAGLSNVKISIAASAVTTIFDYAKVKDLMAAGLYGINLMTYDFFGTPWAETLGHHTNRKALEEGGWAVETIVDHLLAEGFSADRINIGYAGYTRNARQVEIESLSPLKGSYNPGSGPTTGSFESGTSEWYDVIYSYLDLENQKGRNGFNVYTDQVADADYLYSPESKLFLSLDTPRTVKAKGEYAAKLGLGGVFTWTIDQDNGVLVNAVREGLGYEIESEVIDMEPFYFEGINVEKDEEQSDSDDAQKVNHAPKAAIELMVVGGSTVQLSGAGSSDEDNDELSFSWGVPSQIDVADKTAEIIEVVVPEVSEKTAFQFTLFVRDCYNEPSSQQRFVLTAVPALSQVQPEPEEEEEIIVPVPDEEEDTTPAEDDTPADDKTSPYAQWDASTVYGANWGSFEIVSWKGHNYQVKWWSMGNQPDLNCGVGGAWTDLGAYLast
1 -6.020sp|Q6UXT9|ABH15_HUMAN Abhydrolase domain-containing protein 15 OS=Homo sapiens GN=ABHD15 PE=2 SV=2 (Range: 96-180)  ali follow..  5...............................................................................................................................................................................................WFSGPHLQTLCHFVLPVAPGPELAREYLQ---LADDVALDWVVGPCVRGRRITSAGGLPAVLLVIPNAWGRLTRNVLGLCLL.......................................................................................................................................................................................................................................................................................................................................................................................................................................... 85
2 -5.690tr|F8W6M1|F8W6M1_HUMAN Uncharacterized protein OS=Homo sapiens GN=TTLL11 PE=4 SV=1 (Range: 620-750)  ali follow..  12  3........................................................................................................................................................................LKQVFPKYAKQFNYLRLVDRM-----ANLFIRFLGIKGTMKLGPTGFRTFIRSCKLSSSAAVDILYIDITRRWNSMTLDQRDS-GMCLQAFVEAFFFLAQRKFKMLPLHEQVASLIDLCE........................................................................................................................................................................................................................................................................................................................................................................................................................... 120
3 -5.310tr|B1AP70|B1AP70_HUMAN Tubulin tyrosine ligase-like family, member 11 OS=Homo sapiens GN=TTLL11 PE=4 SV=1 (Range: 271-400)  ali follow..  12  3........................................................................................................................................................................LKQVFPKYAKQFNYLRLVDRM-----ANLFIRFLGIKGTMKLGPTGFRTFIRSCKLSSSAAVDILYIDITRRWNSMTLDQRDS-GMCLQAFVEAFFFLAQRKFKMLPLHEQVASLIDLCE........................................................................................................................................................................................................................................................................................................................................................................................................................... 120
4 -4.280sp|Q96QU1|PCD15_HUMAN Protocadherin-15 OS=Homo sapiens GN=PCDH15 PE=1 SV=2 (Range: 1274-1374)  ali follow..  13  2...............................................................................................................................................................................VQEQIPGAKVVVSIGARRHGDAFSLEDYTKCDLTVYANRAIDRNELFKFLDGLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLG................................................................................................................................................................................................................................................................................................................................................................................................................................................... 98
5 -4.280tr|E7EM53|E7EM53_HUMAN Uncharacterized protein OS=Homo sapiens GN=PCDH15 PE=4 SV=1 (Range: 1203-1303)  ali follow..  13  2...............................................................................................................................................................................VQEQIPGAKVVVSIGARRHGDAFSLEDYTKCDLTVYANRAIDRNELFKFLDGLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLG................................................................................................................................................................................................................................................................................................................................................................................................................................................... 98
6 -4.200sp|Q9BX69|CARD6_HUMAN Caspase recruitment domain-containing protein 6 OS=Homo sapiens GN=CARD6 PE=1 SV=2 (Range: 448-668)  ali follow..  18  9....................................................................................................................................................................................................SFVRLGYCSFSKSRILNTLLS-LKLHKIFDGVEITWCFPD----SDDRKENPFFQKPVALANLRGNLESFWTQFGFLMEVSSAVFFFTDCLGEKE........................................................................................................................................................................................................................................................................................................................................................................................................................ 117
7 -4.100sp|Q15361|TTF1_HUMAN Transcription termination factor 1 OS=Homo sapiens GN=TTF1 PE=1 SV=3 (Range: 743-832)  ali follow..  3...........................................................................................................................................................................LTKRMTNGRRIYY-----GMNALRAKV---------------SLIERLYEINVEDTNEIDWEDLASAIGDVYVPFWQKKTFPEIIDYLYET..................................................................................................................................................................................................................................................................................................................................................................................................................................................... 88
8 -3.980tr|E7EPC2|E7EPC2_HUMAN Uncharacterized protein OS=Homo sapiens GN=LIX1L PE=4 SV=1 (Range: 161-284)  ali follow..  15  6........................................................................................................................................................................LESNKGKSMLEFQELMTVFQLLHWNGS--LKAMRERQCSRQEVLAHYSHRALDDDIRHQMALDWSVPGALSRELASTERELDEARLAGKELR....................................................................................................................................................................................................................................................................................................................................................................................................................................................... 100
9 -3.950sp|Q5BKU6|YP026_HUMAN Putative uncharacterized protein LOC641298 OS=Homo sapiens PE=5 SV=2 (Range: 611-704)  ali follow..  16  8......................................................................................................................................................................................CECYISTADWAWQNAIHDLKKSTSSTSLNLKADFNYIKSLSSFESGKFV---PGENINLLAGGSKEKIDMKKLLRNM........................................................................................................................................................................................................................................................................................................................................................................................................................................................ 94
10 -3.950sp|Q3T8J9|GON4L_HUMAN GON-4-like protein OS=Homo sapiens GN=GON4L PE=1 SV=1 (Range: 681-768)  ali follow..  16  6......................................................................................................................................................................AQRKRLQQQMQQ---HVQLLTQI---------HLLATCNPNLNPEATTTRIFLKELGTFAQSSIALHHQYNPKFQTLFQPCNLMGAMQLIEDFST...................................................................................................................................................................................................................................................................................................................................................................................................................................................... 88

FFAS is supported by the NIH grant R01-GM087218-01
1 1 0 2 4 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30.