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Query: PF10126.4; Y1110_METTH/1-151; Uncharacterized protein, homolog of nitrogen regulatory protein PII, from PfamA26U

Results of FFAS03 search in PfamA26U
Master-slave alignment does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIHLQHTPPAVTALMIPAVLSCWSLHPHQIYYLHSTYLCMVILMKVHLRVFIEVENLGRVMNILADEGVTGFYIVEYKGVSPTEWKGFSVKEDPESAISLIHDYARDAVLICSVVDEELVEPIVNRFGEELASEKYTIIEIPIRRIIVNSPLast
1 -109.000PF10126.4; Y1110_METTH/1-151; Uncharacterized protein, homolog of nitrogen regulatory protein PII  ali  100  1MIHLQHTPPAVTALMIPAVLSCWSLHPHQIYYLHSTYLCMVILMKVHLRVFIEVENLGRVMNILADEGVTGFYIVEYKGVSPTEWKGFSVKEDPESAISLIHDYARDAVLICSVVDEELVEPIVNRFGEELASEKYTIIEIPIRRIIVNSP 151
2 -8.410PF11582.3; Q89MS9_BRAJA/2-103; Protein of unknown function (DUF3240 topsan)  ali follow..  13  4............................................YVCLSLILARKLREELLDFLSEGQTSGFTVSDAAGHGS--------GVQLPTAAERVKGHADQ-VHVQIVLPGADARRLVDQLRHSFAGCNLVYWIAPVAE...... 97
3 -7.470PF06618.6; Q83475_9GEMI/1-114; Protein of unknown function (DUF1148 topsan)  ali follow..  29  3....SHTPPEGTVIMV--VPACWS-------------------------VWIWRDGLSALLPALFSPAEEGFFL-ETRLFQFESSPRFLLDVDMADCLS.................................................... 69
4 -6.720PF06237.7; RFT2_RAT/288-389; Protein of unknown function (DUF1011 topsan)  ali follow..  18  10IYSVVAFVNALTNGVLPSVQTYSCLYGPVAYHLSATLSSVASPLACFLPIFLPNRSLLFLGVLTVLGTGFGTYNMAMAAMSP..................................................................... 92
5 -6.680PF11375.3; A0YIZ6_LYNSP/1-193; Protein of unknown function (DUF3177 topsan)  ali follow..  17  4FVWMDYRLAVLFTVIAPLILLFWAFKIDAIQRLLVIYWRVSSLLVITLYLMIAAFPISFITSILARILIV................................................................................. 75
6 -6.450PF14200.1; C0PSY5_PICSI/62-180; Ricin-type beta-trefoil lectin domain-like  ali follow..  10  1..........................PSQQWIMDTSWSVKAKDDAGFPAFALVNKATGQALRHGRSEKDKVTLGPYHPDDLNEA-VLFTQSADVGKGYQCIRPVNNTHLNLDASTGDDKHHEIVLCKWNKKESQKWKI............. 118
7 -6.310PF00675.15; QCR1_BOVIN/58-205; Insulinase (Peptidase family M16)  ali follow..  21  47............................................RPGNALEKEVESMGAHLNAYSTREHTAYYIK-------------ALSKDLPKAVELLADIVQNCSLEDSQIEKERDVILQEL......................... 115
8 -6.060PF00543.17; O54449_AZOVI/4-105; Nitrogen regulatory protein P-II  ali follow..  17  1...............................................VTAIIKPFKLDDVRESLSEIGVQGITVTEVKGFGRQKGHT-ELYRGAEYVVDFL-----PKVKIDVAIEDSQLDHVIEAITKAANTGK................ 82
9 -5.900PF12444.3; A8WAC8_PELFU/21-102; Sox developmental protein N terminal  ali follow..  20  53...................................................................................................................NEKFPQCIREAVSQVLKGYDWTLVPVPVR....... 81
10 -5.860PF10520.4; Q1D0D6_MYXXD/67-239; Kua-ubiquitin conjugating enzyme hybrid localisation domain  ali follow..  20  102..HMDSPPALVGFLQRVHLILPPDHHPYNKYYCITVGWMNKPLTMVHFFPTAER------------------LITWATGLLPRQDD................................................................. 173
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.