FFAS03 results for PF06153

Query: PF06153.6; YAAQ_BACSU/1-109; Protein of unknown function (DUF970 topsan), from PfamA26U

FFAS03:
PfamA26U
more ...
- COG
- PDB
- SCOP
PSI-BLAST:
nr85s

Results of FFAS03 search in PfamA26U
Master-slave alignment does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 .`
#	Score	Template	Links and tools	%id	First	`MKLIVAVVQDQDSNRLLKTLTDHNFRVTKLATTGGFLKSGNTTFMIGVEDIRVNKALSLIKENGQKRDQMIAPVSPMGGNADSYVPYPVEVEVGGATVFVLPVDEFHQF`	Last
1	-67.600	`PF06153.6; YAAQ_BACSU/1-109; Protein of unknown function (DUF970 topsan)`	`ali`	100	1	`MKLIVAVVQDQDSNRLLKTLTDHNFRVTKLATTGGFLKSGNTTFMIGVEDIRVNKALSLIKENGQKRDQMIAPVSPMGGNADSYVPYPVEVEVGGATVFVLPVDEFHQF`	109
2	-33.700	`PF00543.17; O54449_AZOVI/4-105; Nitrogen regulatory protein P-II`	`ali follow..`	12	1	`...VTAIIKPFKLDDVRESLSEIGVGITVTEVKGFGRQKGHTELYRGAEY--------VVDFLPKVKIDVAIEDSQLDHVIEAITKAANTGKIGDGKIFVVNLEQAIRI`	99
3	-9.690	`PF11582.3; Q89MS9_BRAJA/2-103; Protein of unknown function (DUF3240 topsan)`	`ali follow..`	14	4	`YVCLSLILARKLREELLDFLSEQP-GFTVSDAAGHGSGVQLPTAA------------RVKGHADQVHVQIVLPGADARRLVDQLRHSFAGCNL---VYWIAPVAEFGTI`	101
4	-8.330	`PF09400.5; A1AEL5_ECOK1/1-112; Protein of unknown function (DUF2002 topsan)`	`ali follow..`	16	6	`.............DEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNRE-ARMGRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPL....................`	80
5	-7.350	`PF12146.3; A1AB21_ECOK1/17-96; Putative lysophospholipase`	`ali follow..`	10	17	`.KKVIVLFHSGRLQHIVDELAMPDTAFYAWDARGHGQTSGPRGYSPSLAR--VQDVDEFVR................................................`	80
6	-6.820	`PF01981.11; A2Y6L9_ORYSI/89-204; Peptidyl-tRNA hydrolase PTH2`	`ali follow..`	16	52	`.KIVLTCKNQQEMNRIKETAEHRGIPTFVVADAGRTQVQAGSKTVLAVGPGRKADIDSVTGK...............................................`	112
7	-6.380	`PF10035.4; Q5FKF1_LACAC/225-279; Uncharacterized protein conserved in bacteria (DUF2179 topsan)`	`ali follow..`	18	2	`.........................GFTYLNALGGYKQDKKRVIYVVVSPREIATIKQLIRQ...............................................`	38
8	-6.340	`PF06897.7; Q92YG4_RHIME/60-161; Protein of unknown function (DUF1269 topsan)`	`ali follow..`	16	19	`...LIGVALGAASGAIGGALSDVGINDNFMKELARGLQPGNAALFVLVKEMTEDKVLKDISPFGGTILRTSLDESKEQLLRDALQKA......................`	102
9	-6.010	`PF12796.2; A3YC40_9GAMM/544-718; Ankyrin repeats (3 copies)`	`ali follow..`	17	122	`..............EIAKLLISRGASPIAKHNTG---MLGYTPLMLAIELNEAELVKFMLDS...............................................`	166
10	-5.850	`PF11080.3; A7MNX5_ENTS8/3-98; Protein of unknown function (DUF2622 topsan)`	`ali follow..`	21	21	`..........TDINELNNHLTRGGFQLTLADDDGKIHELGTNTFGL-VSALSEQEVAELAEGLGEAALDQKPQ------------------------VTVTTFENWLR.`	93

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

Comments and questions to: webmaster