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Query: PF03213.9; VP35_FOWPN/1-327; Poxvirus P35 protein, from PfamA26U

Results of FFAS03 search in PfamA26U
Master-slave alignment does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAPGDKKQIIFVITTIGRPSSTVVPFKNLEVSEWSYKKGIKNGYDDYRDPPSPKPLPKSKQEPNADDKVGDIEYDEMVSVRDGYYSDVCRLTCTEDTKIFIADHISLWRYIMDNAEKLPNYVVIMEDDNTITGEGFITNLDNITKVLNDNNVDILQLVTHTKLLKDRNSQHLMLLPDLEAFKGSFDVSLSAYIIRQEAVRKLYSYFTNNKPSFDISLEILRIENTLGITRYVVDNDRYVYHDYKLANEFMKNKKNRLSIKSRIDGWIMDNWPSFYHRMYYPLFSVFGKYDITMMFLIAIVIIIGLAIFDINNKLLWLLSGVFLAYSMLast
1 -130.000PF03213.9; VP35_FOWPN/1-327; Poxvirus P35 protein  ali  100  1MAPGDKKQIIFVITTIGRPSSTVVPFKNLEVSEWSYKKGIKNGYDDYRDPPSPKPLPKSKQEPNADDKVGDIEYDEMVSVRDGYYSDVCRLTCTEDTKIFIADHISLWRYIMDNAEKLPNYVVIMEDDNTITGEGFITNLDNITKVLNDNNVDILQLVTHTKLLKDRNSQHLMLLPDLEAFKGSFDVSLSAYIIRQEAVRKLYSYFTNNKPSFDISLEILRIENTLGITRYVVDNDRYVYHDYKLANEFMKNKKNRLSIKSRIDGWIMDNWPSFYHRMYYPLFSVFGKYDITMMFLIAIVIIIGLAIFDINNKLLWLLSGVFLAYSM 327
2 -31.500PF01755.12; Q9ZFP8_HAESO/1-183; Glycosyltransferase family 25 (LPS biosynthesis protein)  ali follow..  19  1.......MFNYVISLKSAV-----------------------------DRRQHIEKEFSQQHIPYTFFDAFQLNEENKHILQHYVPALSKSNLANKLKSCFMSHVLLWQKCVD---ENLPFIAIFEDDIFLSSVKFLSEYDWLKERLAFNQYFILRLETIYMKSEYCKTKIPDYQNRKFNRLMSGHFGMGGYILSQVAAKKLLALFKN....................................................................................................................... 171
3 -10.100PF05106.7; B1JD04_PSEPW/4-103; Phage holin family (Lysis protein S)  ali follow..  13  2.............................................................................................................................................................................................................................................................PDKPDTWAIALAWLSQHSPLLYAAGLSCAMAVL-LVEGAICGGLTLTIISGFEFFGLPQSMAAFVGGWV..... 81
4 -8.730PF03248.8; Q6CXG0_KLULA/11-182; Rer1 family  ali follow..  12  56........................................................................................................................................................................................................................LGIYLLNQFLAFLTPKFDVSLQQNEQNEEMEAGEMTDEFRP-FIRRLPEF--KFWHNSIRAAVLCFFTFFSVFDIPVFWPILLMYFIVLFALTMRRQINHMIKYKYVPLDI 164
5 -7.940PF01124.13; Q1GLI8_SILST/7-136; MAPEG family  ali follow..  6  40.........................................................................................................................................................................................................................................................GDLQDMVSKRTARLFRAMNNHFEGLILFSIACVVVTLSGQSSLFTTVCAFAYLGSRVLYIPPWRSLIWAVGYLATAAM 124
6 -7.490PF13231.1; Q97MK3_CLOAB/67-225; Dolichyl-phosphate-mannose-protein mannosyltransferase  ali follow..  14  3...............................................................................................................................................................................................................................................................................PPVGFWIQTIFAKVFGFKGWSILPQAIAGVLSVLIIYYLVKRSFGKPAGLIAALCL 59
7 -7.460PF04756.8; Q8SY53_DROME/162-312; OST3 / OST6 family  ali follow..  15  1.....................................................................................................................................................................................................................................................................SIAKFVAERTDITIRIFRPPNYSGTVAMITLVALVGSFLYIRRNNLEFLYNKNLWMISGQMWNHI. 75
8 -7.430PF09900.4; Q5E5X1_VIBF1/6-146; Predicted membrane protein (DUF2127 topsan)  ali follow..  6  11...........................................................................................................................................................................................ACKGIASLLVGFGLHVLAGHNMRQLAENIVSRLHLNPAGHLPSIFIHAASGLTDARMGLLAIGALVYSVIRLVEAYGLWQGLVWTEWFALVSGAIYLPFEIYEMNLLGIGVFFINVFIVAY-----MAYAL......... 140
9 -7.410PF11023.3; Y906_OCEIH/4-117; Protein of unknown function (DUF2614 topsan)  ali follow..  14  1...............................................................................................................................................................................................................................................................QLTYSSKINK--IRTF-ALILVFAGIITMYGGILTKNIEWLMVIFFILGTLMV-ILSCAVYVWIGTLSLRAV 68
10 -7.380PF06237.7; RFT2_RAT/288-389; Protein of unknown function (DUF1011 topsan)  ali follow..  9  22................................................................................................................................................................................................................................................................NGVLPSVQTYSCLPYGPVAYHLSSPLACFLPIF-LTVLGTGFGTYNMAMAAMSPCPILQGHWGG....... 102
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.