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Query: 1g6k_A mol:protein length:261 GLUCOSE 1-DEHYDROGENASE, from PDB0516

Results of FFAS03 search in PfamA30U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTQYPSFQAGRGLast
1 -71.600PF00106.23; YOXD_BACSU/7-201; short chain dehydrogenase  ali follow..  27  1.......KTALITGGGRGIGRATALALAKEGVNIGLIGR-TSANVEKVAEEVKALGVKAAFAAADVKDADQVNQAVAQVKEQLGDIDILINNAGISKFGGFLDLSADEWENIIQVNLMGVYHVTRAVLPEMIERK-AGDIINISSTAGQRGAAVTSAYSASKFAVLGLTESLMQEVRKHNIRVSALTPSTVASDMSIELNLT........................................................... 193
2 -32.600PF13561.4; I0I4U0_CALAS/13-250; Enoyl-(Acyl carrier protein) reductase  ali follow..  20  2............VANKNSIAWGIAQALHAEGAELGFSYAGEKKRVEPLAESI-----GSRVEECDVTSDEAIDVLFDKAAQHFGKLDFLVHSIAYAPSEELINTTRKGFRIALDVSCYSLIALAKRAQPLMTD---GGAMLTMTYYGAEKVTPNYNVMGVAKAALEATVRYLAWDLGKDRIRVNAISAGPIKTLAASGVSGFRKSLSYVGQVAPMGNV-DQEDVGHAAAFLLSDRAARITGEILYVDGGY........... 236
3 -29.500PF08643.8; A3LXU8_PICST/127-422; Fungal family of unknown function (DUF1776 topsan)  ali follow..  13  2.....RRDIVLVVGPTEPLTRLIALDFEKRGFIVYLTILDEKD-----FKYVESNPITDDINYLNLNDTLSYESQLSKFQQLLELPVVVFAPSLFFPIGPIENITVATWTKFTDRELLYLKLFSSGLIS-LIRNQQSKTILISTNIVSSLEIPYHAPETLFQNHLKHLFTTLTREVRQHGLSVTQVRLGNLHLS................................................................... 200
4 -28.400PF08659.8; M2UMU6_COCH5/2217-2396; KR domain  ali follow..  17  4..........VISGGLGGLGREIMRWMVSRGARHFLRGVAGRADVIAFIREMEAQGVVVHAPASDISNRAVLEATLEDASKTLPPIKGCIQAAMVLSDNMLSNMTVEQYHRALAPKYQGSWNLHELLPKDM--------MVFLSSMSGIIGNPAQANYAAGNT----FEDGLARHRAANGLKGVSFDLGLVL..................................................................... 179
5 -22.500PF12241.6; FABV_VIBF1/82-317; Trans-2-enoyl-CoA reductase catalytic region  ali follow..  12  9...........................................NSAAFDKFAKEEGLYSKSLNGDAFSNEAKQKTIDLIKEDLGQIDMVVYSLASPVEASVEPATEQEIKDTVTVMGGEDWELWINALSEAGVLADGCKTVAYSYIGTELTWPIYGALGQAKMDLDRAATALNEKLSATGGTANVAVLKSVVTQASSAIPVMPLYIAMVFK--KMREEGVHEGCQEQILRMFSQ........................... 233
6 -11.000PF01073.17; O22813_ARATH/15-299; 3-beta hydroxysteroid dehydrogenase/isomerase family  ali follow..  16  1..........VVTGGLGFVGAALCLELVRRGARQVRSF--DLRHSSPWSDDLKNSG--VRCIQGDVTKKQDVDNALD-------GADCVLHLASYGMSG-----EMLRFGRCDEVNINGTCNVLEAAFKHEIT-----RIVYVSTYNVVFGGKEILNYSRTKS-LVLKSNGRPFKNGGKRMYTCAIRPAAIYGP------GEDRHLPRIVTLTKLGLIGEPSVKSDWIYVENLVLAIILASMGLLDDIPGREGQPVAAGQ. 247
7 -9.730PF01370.19; RMLB_NEIGO/9-257; NAD dependent epimerase/dehydratase family  ali follow..  15  1.........ILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDRAELDRVFAQ------RPDAVMHLAAESH----VDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMPSEKR-ISTDEVYGDLPYAPSSPYSASKAAADHLVRAWQRTYRLPSIVSNCLIPLMILNALSGKPLP-EDHARALYQVVTEGVVGETYNIG.................................... 249
8 -8.660PF03435.16; Q94BZ0_ARATH/41-165; Saccharopine dehydrogenase NADP binding domain  ali follow..  10  1.........VLVLGGTGRVGGSTATALSKLCPELKIVVGGRNR--EKGEAMVAKLGENSEFSQVDINDAKMLETSLRDV-------DLVVHAAGPFQQAPRCTVLEAAIKTKTALDVCDDTSYAFRAKSLEAEAIAANIPA........................................................................................................................ 124
9 -8.160PF02719.13; Q9K6L1_BACHD/277-560; Polysaccharide biosynthesis protein  ali follow..  14  1.........VLVTGAGGSIGSEICRQIACFQPETLVLLGHGENSIYSIEMELRDK--NIVTEIADIQDREKMFSIMDDRKPH------VVFHAAAHKHVPLMERNPEE---AVKNNVLGTKNTAEAASAANVNT-STDKAVNPTSVMGAMDMISDTRFVAVRFGNVLGSRGSVIPLFKKQIQKG--GPVTVTDPMVRYFMTIPEASRLVLQAGALADGGE--DLARNLIRLSGYTEDEIPIVFTGMRPGEKLFEEL..... 264
10 -8.000PF05368.11; NMR1_NEUCR/67-329; NmrA-like family  ali follow..  1.........IAVINAAGRQAASFIRVATAVGFHVAQMRNLEGVVATEVSTN-----PNVTVLQGELYTKETPAESDKGQCVDVTKNGLFRGAQLAFINTTFYGDEERIGMALADA-------AKKAGVQHYVYS-------SMPDHHAYNKDWPSLPLWASKHRVEDYVKEI-------GIPATFVYTGIYNNNFTSLPYPLFCTDLQFHPNAKLPWLDAEHDVGPAILQIFKDGVKKWGGKRIALAYEMLTPLEACE... 249

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.