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Query: 2vj3_A mol:protein length:135 NEUROGENIC LOCUS NOTCH HOMOLOG PROTEIN 1, from PDB0516

Results of FFAS03 search in PDB0516
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst SAQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHHILDAQKMVWNHRLast
1 -58.2002vj3_A mol:protein length:135 NEUROGENIC LOCUS NOTCH HOMOLOG PROTEIN 1  ali model  100  1SAQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHHILDAQKMVWNHR 135
2 -52.4004xlw_A mol:protein length:124 Neurogenic locus notch homolog protein 1  ali model follow..  85  1...DVDECALGANPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQCICMPGYEGVYCEINTDECASSPCLHNGRCVDKINEFLCQCPKGFSGHLCQSGRLEVLFQ........ 124
3 -46.0005fm9_A mol:protein length:157 NEUROGENIC LOCUS NOTCH HOMOLOG PROTEIN 1  ali model follow..  31  2..AQADPCA--SNPCANGGQCLPFEASYICHCPPSFHGPTCRQDVNECGQKPCRHGGTCHNEVGSYRCVCRATHTGPNCERPYVPCSPSPCQNGGTCRPTGDTHECACLPGFTGQNCEENIDDCPGNNCKNGG.. 133
4 -44.6005fma_A mol:protein length:154 NEUROGENIC LOCUS NOTCH HOMOLOG PROTEIN 1  ali model follow..  31  4.........CASNPCANGGQCLPFEASYICHCPPSFHGPTCRQDVNECGEKPCRHGGTCHNEVGSYRCVCRATHTGPNCERPYVPCSPSPCQNGGTCRPTGDTHECACLPGFTGQNCEENIDDCPGNNCKNGG.. 130
5 -42.3001pfx_L mol:protein length:146 FACTOR IXA  ali model follow..  17  13.........NLERECIEEKCSFEEAREVFENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFPCGRVS.. 136
6 -42.2004xbm_A mol:protein length:531 Delta-like protein 1  ali model follow..  31  384..KKIDYCS--SSPCSNGAKCVDLGDAYLCRCQAGFSGRHCDDNVDDCASSPCANGGTCRDGVNDFSCTCPPGYTGRNCSAPVSRCEHAPCHNGATCHQRGHGYVCECARSYGGPNCQFLLPELPPGPAVVDL.. 512
7 -39.2004d90_A mol:protein length:143 EGF-like repeat and discoidin I-like domain-c  ali model follow..  41  3.........CDPNPCENGGICLPGLGSFSCECPDGFTDPNCSSVVGPCTPNPCHNGGTCEDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYKGG............. 136
8 -38.1004gk9_A mol:protein length:279 agglutinin (BOA)  ali model follow..  12  48...........NIKSGDGGRTLTGTMTYVGEGPIGFRATLTQSNTYAGSSAPWHPGGTWVAGTMTYAGEGPIGFKSQQADGGVYAGSSAPWHNGGVWVNGNMTYAGEGPIGFKGNSVAGNNYAGTSAPWHPGG.. 232
9 -37.2001nfu_B mol:protein length:195 COAGULATION FACTOR XA, LIGHT CHAIN  ali model follow..  20  7.........HLERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQT.. 131
10 -35.9004fbr_A mol:protein length:267 Myxobacterial hemagglutinin  ali model follow..  15  37...........DIKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTGTSAPWQPGGVWVTGTTTYNGEGPIGFKSEVTDGDTYSVENQKSNDGGKTLSGTMTYNGEGPIGFRGTLTSPDTYTGSTAPWNPGG.. 222
11 -34.2001dan_L mol:protein length:152 BLOOD COAGULATION FACTOR VIIA light chain  ali model follow..  19  14...........ERECKEEQCSFEEAREIFKDAERTKLFWISYSDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCGKIP.. 139
12 -33.6001p0s_L mol:protein length:138 Coagulation factor X precursor  ali model follow..  22  15..RECMEETCSYEEAREVFEDSDKTNEFWNKYKDG----------DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQT.. 136
13 -32.9001aut_L mol:protein length:114 ACTIVATED PROTEIN C  ali model follow..  25  8QCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPCGRPWKRMEKKRSH............................... 113
14 -31.2001fax_L mol:protein length:96 FACTOR XA  ali model follow..  26  2..........................................KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKCSLDNGDCDQFCHEEQASVVCSCARGYTLADNGKACIPTGPYPCGKQT.. 93
15 -29.5001whe_A mol:protein length:86 COAGULATION FACTOR X  ali model follow..  27  1........................ANSFLEEVKQGNLE------------RECLEEACSLEEAREVFEDAEQTDEFWSKYKDGDQCEGHPCLNQGHCKDGIGDYTCTCAEGFEGKNCEFSTR............. 86
16 -29.2004cbz_A mol:protein length:312 PROTEIN JAGGED-1  ali model follow..  25  196..PECNRAICRQGCSPKHGSCKL---PGDCRCQYGWQGLYCD----KCIPHPGCVHGICNE---PWQCLCETNWGGQLCDKDLNYCGTQPCLNGGTCSNGPDKYQCSCPEGYSGPNCEIV............... 305
17 -28.4004xlw_B mol:protein length:261 Delta-like protein  ali model follow..  25  157..DSCSRLCKKRDDHFGHYECQP---DGSPSCLPGWTGKYCDQPI--CLSGCHEQNGYCSK---PDECNCRPGWQGPLC----NECIPHKGCRHGTCT---IPWQCACDEGWGGLFCDQAA.............. 260
18 -27.7004bdw_A mol:protein length:85 COAGULATION FACTOR XIIA HEAVY CHAIN  ali model follow..  26  2........................................SEKCFEPQLLRFFHKNEIWYRTEQAAVARCQCKGPDAHCQLASQACRTNPCLHGGRCLEVEGHRLCHCPVGYTGPFCDVDTA............. 84
19 -27.5002vj2_A mol:protein length:169 JAGGED-1  ali model follow..  26  58.....NRAICRQGCSPKHGSCKL---PGDCRCQYGWQGLYC----DKCIPHPGCVHGICNE---PWQCLCETNWGGQLCDKDLNYCGTQPCLNGGTCSNTPDKYQCSCPEGYSGPNCEI................ 163
20 -25.5001tpg_A mol:protein length:91 T-PLASMINOGEN ACTIVATOR F1-G  ali model follow..  23  1..........................SYQVICRDEKTQMIYQ--QHQSWLRPVLRSNRV------EYCWCNSGRAQ-CHSVPVKSCSEPRCFNGGTCQQALSDFVCQCPEGFAGKSCEIDTR............. 89
21 -24.1004xl1_B mol:protein length:230 Delta-like protein  ali model follow..  25  146..........................SYRVVCSDNYYGDSCSRLCKK--RDDHFGHYECQP---DGSPSCLPGWTGKYCDQPI--CLSGCHEQNGYCS---KPDECNCRPGWQGPLCNEAA.............. 230
22 -21.5002m74_A mol:protein length:136 Fibrillin-1  ali model follow..  32  44...........RHSCGDGFCSRPN----MCTCPSGQIAPSCGSRSIQHCNIRCMNGGSCSDD----HCLCQKGYIGTHCGQPV---CESGCLNGGRCV---APNRCACTYGFTGPQCE................. 136
23 -21.4001gl4_A mol:protein length:285 NIDOGEN-1  ali model follow..  12  1APLAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGRQCVAEGSP-GKVKGRIFVGSSQVPVVFENTDLHSYVVMRSYTAISTIPETYSLLPLAPIGGIIGWMFAVEQDGNGFSIT................. 130
24 -20.9002ygq_A mol:protein length:324 WNT INHIBITORY FACTOR 1  ali model follow..  24  192LCVTPGFCICPPGTCFNGGTCFY---PGKCICPPGLEGEQCEISK----PQPCRNGGKCI---GKSKCKCSKGYQGDLCSKPV---CEPGCGAHGTCH---EPNKCQCQEGWHGRHCNKRYEASLIG........ 316
25 -20.2002bo2_A mol:protein length:143 EGF-LIKE MODULE CONTAINING MUCIN-LIKE HORMONE  ali model follow..  26  1...DSRGC---ARWCPQDSSCV---NATACRCNPGFSSFS--DDINECATLSCGKFSDCWNTEGSYDCVCSPGYEENTCQ-DVDECSSGQCDSSTVCFNTVGSYSCRCRPGWKGIPNNQKDTVCE.......... 143
26 -20.1004k0v_A mol:protein length:529 TEK tyrosine kinase variant  ali model follow..  26  196.....PECNHLCTACMNNGVCHEDTG--ECICPPGFMGRTCEKACELCKQEGCKSYVFCLPDPYG--CSCATGWKGLQCNEACHDCKLRSCNNGEMCDRFQG---CLCSPGWQGLQCERE............... 321
27 -19.8001z1y_A mol:protein length:186 ookinete surface protein Pvs25  ali model follow..  21  40TCEEKNECKKETLGKA-ENPDPAQVNMYKCGCIEGYTLKEDTCVLDVCQYKNCGESGECLSEIQSAGCSCAIGKVEKKCKTGETACQLKCNTDNEVCKNVEGVYKCQCMEGFT...................... 169
28 -19.6001hre_A mol:protein length:67 HEREGULIN ALPHA  ali model follow..  21  1.....................................GTSHLVKCAEKEKTFCVNGGECLSNPSRYLCKCQPGFTGARCTENVPMKVQNQEKAEELY...................................... 65
29 -18.7001uzj_A mol:protein length:162 FIBRILLIN-1  ali model follow..  20  1..TDVNECLDPTTCI--SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFR-DECQELPGLCQGGKCIN.... 139
30 -17.3001yo8_A mol:protein length:634 thrombospondin-2  ali model follow..  25  1..ADPDGCL--SNPCFPGAQCSSFPGSWSCFCPVGFLGNGTHEDLDECALVSTSKVPRCVNTQPGFHCPCPPRYRGNQPVEPENPCKTHNCHKHAECIFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNLNL.. 158
31 -17.0001f7e_A mol:protein length:46 PROTEIN (Blood Coagulation Factor VII)  ali model follow..  32  1................................................................................SDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDGSA......... 46
32 -16.3002w86_A mol:protein length:147 FIBRILLIN-1  ali model follow..  31  1.SADIDECESSP----INGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTWGSPCTLCQVDPICGKGYSGTQCE-DIDECEVFPVCKNGLCVNTRGSFKCQCPSGMTGRIC.................. 146
33 -16.0003asi_A mol:protein length:410 Neurexin-1-alpha  ali model follow..  24  147................................KEGFQG---------CLASVDLNGRLPDLISDALF---CNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSTSFSGPLCNDPGTTYIF......... 229
34 -16.0004wm0_D mol:protein length:50 Coagulation factor IX  ali model follow..  45  2..............................................................................DIVDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCELL............... 43
35 -15.8001emn_A mol:protein length:82 FIBRILLIN  ali model follow..  41  1SAVDMDECKEPDVCK--HGQCINTDGSYRCECPFGYIGNECV-DTDECSVGNPCGNGTCKNVIGGFECTCEEGFEMMTCE....................................................... 82
36 -15.6004z80_A mol:protein length:508 EGF family domain-containing protein  ali model follow..  15  364.CKPMNARA--SLSNATAEQCGQRLMLSSADGSSLSSQVRGYHWATFVATDCNMGRGKCFFYSTVPECLIHAIDPDSIAVLPEDKCVSVDCGAHGTCDV--ATGKCVCEPGFTGERCDAAAL............. 505
37 -15.5001lmj_A mol:protein length:86 fibrillin 1  ali model follow..  36  1..TDIDECRISPDLCGR-GQCVNTPGDFECKCDEGYEMKNCM-DIDECQRDPLCRGGVCHNTEGSYRCECPPGHQ............................................................ 77
38 -15.2003h5c_B mol:protein length:317 Vitamin K-dependent protein Z  ali model follow..  28  3..........................................KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECRTDGCQH--FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCAC...... 90
39 -14.9005e6w_A mol:protein length:317 Integrin beta-2  ali model follow..  26  187...RCRDQSRDRSLCHGKGFLE------ICRCDTGYIGKNCECQTQGRSSQECSGLGDCVCG----QCLCHTSIYGQYCECDTINCERYNGPGRGLCFCG----KCRCHPGFEGSACQ................. 313
40 -14.9002ygo_A mol:protein length:188 WNT INHIBITORY FACTOR 1  ali model follow..  16  76.............RSLDKGIMAD---PTVNVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEV--DVIVMNSEGNTILKTPQNAQAECPGGCRNGGFCN---ERRICECPDGFHGPHCEGT............... 181
41 -14.9002w2m_E mol:protein length:107 LOW-DENSITY LIPOPROTEIN RECEPTOR  ali model follow..  18  1.....................MKPMSDYDIPTTENLYFQGAM-GTNECLDNNGGCSHVCNDLKIGYECLCPDGFAQRRCEDIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQ...................... 92
42 -14.1001cej_A mol:protein length:96 PROTEIN (MEROZOITE SURFACE PROTEIN 1)  ali model follow..  18  1...NISQHQCVKKQCPQNSGCFRHLEREECKCLLNYKQETCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSGIFCS....................................................... 93
43 -14.0001egf_A mol:protein length:53 EPIDERMAL GROWTH FACTOR  ali model follow..  20  1.............................................................................NSYPGCPSSYDGYCLNGGVCIESLDSYTCNCVIGYSGDRCQTRDLRWWE......... 51
44 -13.9001z6c_A mol:protein length:87 Vitamin K-dependent protein S  ali model follow..  42  1..KDVDECSLKPSICGTA-VCKNIPGDFECECPEGYRSKSCE-DIDECSENMCAQ--LCVNYPGGYTCYC................................................................. 68
45 -13.8001fsb_A mol:protein length:40 P-SELECTIN  ali model follow..  32  1..................................................................................TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRE............. 40
46 -13.5002kl7_A mol:protein length:71 Fibulin-4  ali model follow..  25  1..SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLH-----------GEGPPPPVPPAQHPNPCPPGYE............................................................ 62
47 -13.4001ob1_C mol:protein length:99 MAJOR MEROZOITE SURFACE PROTEIN  ali model follow..  18  1...NISQHQCVKKQCPQNSGCFRHLEREECKCLLNYKQETCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSGIFCS....................................................... 93
48 -12.8004um8_B mol:protein length:788 INTEGRIN BETA-6  ali model follow..  24  453......NCDCQKEVEVNSSKCHHGNGSFQCACHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGRGDCYCYGNIYGPYCQCDNFSCVRHKCGGNGDCDCG----ECVCRSGWTGEYCNTSTDSCVSEDCSGRG.. 595
49 -12.4003gcw_E mol:protein length:83 Low-density lipoprotein receptor  ali model follow..  24  1GAMGTNECLDNNGGCSY--VCNDLKIGYECLCPDGFQQRRCEDIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQ............................................................ 74
50 -12.2002p26_A mol:protein length:280 Integrin beta-2  ali model follow..  25  186........................................CRCRDQSRDRSLCHGKGFLECG----ICRCDTGYIGKNCECQTQSCRKDNCSGLGDCVCG----QCLCHTSIYGQYCE................. 274
51 -12.1002qn5_B mol:protein length:133 Bowman-Birk type bran trypsin inhibitor  ali model follow..  12  8..............CDNIKRLPTKPDPPQWRCNDELEPSQCTAACKSCREAPGPFPGKLI---------CEDIYWGADPGPFCTPRPWGDCCDKAFCNKMNPP-TCRCMDE--VKECADACKDCQRVESSEPP.. 114
52 -12.1001n1i_A mol:protein length:105 Merozoite surface protein-1  ali model follow..  19  9...........................................SAHKCIDTNVPENAACYRYLGTEEWRCLLGFKGGKCVPASITCEENNCAPEAECTMDKKEVECKCTKEGSE..................... 85
53 -11.9003gis_X mol:protein length:121 Thrombomodulin  ali model follow..  24  2..EPVDPCF--RANCEY--QCQPLNTSYLCVCAEGFAPIPHEPHRCQLFCNQTACPADC-DPNTQASCECPEGYIGFICTDIDECENGGFCSG--VCHNLPGTFECICGPDSA...................... 109
54 -11.8001gk5_A mol:protein length:49 MEGF/TGFALPHA44-50 CHIMERA  ali model follow..  21  1.............................................................................NSYPGCPSSYDGYCLNGGVCIESLDSYTCNCVIGYSGDRCE................. 43
55 -11.7004ux8_C mol:protein length:463 GDNF FAMILY RECEPTOR ALPHA-1  ali model follow..  15  144..SKGNNCLDAAKACNLDDTCKKYRSAYITPCTTSMSNEVCNRRRPNCLSDSCKTNYICRSRLADFFTNCQPESRSVSNCLKENYADCLLAYSGLIGTVMTPNYWCDCNSGNDLEDCLKFLNFFKDNTCLKNA.. 336
56 -11.6004zlp_A mol:protein length:271 Neurogenic locus notch homolog protein 3  ali model follow..  18  4........VSEEPRCPR-AACQAKRGD---RCDRECNSPGCGWDGGDCSLSVGDPWRQCEALQCWRLFRCDPACSSPACLYDNFDCHAGGHFADGRCDQGCNTEEC----GWDGLDCASEV.............. 127
57 -11.3003ltf_D mol:protein length:58 Protein spitz  ali model follow..  20  2.........................................................................FPTYKCP---ETFDAWYCLNDAHCIADLPVYSCECAIGFMGQRCEYKEIDNTYLP....... 57
58 -11.3003cfw_A mol:protein length:164 L-selectin  ali model follow..  26  104.........................................................................WNDDACHKLTASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQ-FVQVDPR......... 161
59 -11.1003r05_A mol:protein length:1254 Neurexin-1-alpha  ali model follow..  20  148.................................EPFKG---------WIRDVRVNSSL-VDSGEVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSTGFRGKDCSQGKE............. 230
60 -11.1004ux8_A mol:protein length:607 PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RECEPT  ali model follow..  15  498.....LECEECGGLGSPTGRCEWRQGDGK-GITRNFS--TCSPSTKTCPD------GHCDVVETQDINICPQDCLRGSIGGHEPGEPRGIKAGYGTCNCFPEEEKCFCEPEIQDPLCDE................ 604
61 -11.1001dx5_I mol:protein length:118 THROMBOMODULIN  ali model follow..  24  2..EPVDPCF--RANCEY--QCQPLDTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADC-DPNTQASCECPEGYIGFICTDIDECENGGFCSG--VCHNLPGTFECICGPDSA...................... 109
62 -11.0002pe4_A mol:protein length:424 Hyaluronidase-1  ali model follow..  15  290.....ESAAQGAAGVVLWVSWENTRTKESCQAIKEYMDTNVTSGALLCSQALCSGHGRCVTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVEFKCRCYPGWQAPWCERK............... 413
63 -10.9002npr_A mol:protein length:90 Merozoite surface protein 1  ali model follow..  18  4...........................................SEHTCIDTNVPDNAACYRYLGTEEWRCLLTFKGGKCPASNVTCKDNNCAPEAECKMTSNKIVCKCTKEGSE..................... 81
64 -10.8001b9w_A mol:protein length:95 PROTEIN (MEROZOITE SURFACE PROTEIN 1)  ali model follow..  20  3...........................................SEHRCIDTNVPENAACYRYDGTEEWRCLLYFKAGKCPAPNMTCKDKNCAPEAECKMNKNEIVCKCTKEGSGVFCS................. 89
65 -10.8002gh0_A mol:protein length:213 GDNF family receptor alpha-3  ali model follow..  18  10.....DLCLKFAMLCTLNDKCDRLRKAYGEACSGPHCQRHCLRQLLTFFEKAAEPHAQCPCAPNDRGCGCALPPVAPNCLELRRLCFSDP-----LCRSRLVDFQTHCHPMDILGTCATEQSRCLRA........ 141
66 -10.7004g1e_B mol:protein length:738 Integrin beta-3  ali model follow..  25  434......DCACQAQAEPNSHRCNNGNGTFECRCGPGWLGSQCESQQDECGQPVCSQRGECL------QCVCHSSITGKYCECDDFSCVRYKCSGHGQCSCG----DCLCDSDWTGYYCNTRTDTCMSSNCSGRG.. 579
67 -10.5003zyj_B mol:protein length:426 NETRIN-G1  ali model follow..  23  296......RCKCNL----HATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGYLPIPKGAANACISISSIGTNVCDNELLHCQNGGTCHNNVR--------CLCPAAYTGILCE................. 397
68 -10.3004bxs_A mol:protein length:423 FACTOR X-LIKE PROTEASE  ali model follow..  23  14......ERECIEERCSKEEAREVFEDDEKTE--------NVYVDGDQCSSNPCHYRGICKDGIGSYTCTCLSGYEGKNCERVLYKVDNGNCWH--FCKHVQNDIQCSCAEGYLLGEDGHSCVAGGNFSC...... 132
69 -10.2003v65_B mol:protein length:386 Low-density lipoprotein receptor-related prot  ali model follow..  26  1..TGEENCNVNNGGCAQ--KCQMIRGAVQCTCHTGYRGRTCQDVNECAEEGYCSQ--GCTNSEGAFQCWCEAGYDRRSCKAL..................................................... 84
70 -10.0005f1a_A mol:protein length:553 Prostaglandin G/H synthase 2  ali model follow..  36  2...................................................................................NPCCSHPCQNRGVCMSGFDQYKCDCTTGFYGENCST................ 39
71 -9.5302ddu_A mol:protein length:387 reelin  ali model follow..  16  184GLDGVYISEPCPSYCSGHGDCISG----VCFCDLGYTAAQGTC---SNTPNHSEMFDRFEGKLSPLWYKITGGQVGTGCGTLNDGRTVPLDTRNIRLVQ----FYIQIGSKTSGITCI................. 304
72 -9.5101u67_A mol:protein length:600 Prostaglandin G/H synthase 1 precursor  ali model follow..  34  33..................................................................................VNPCCYYPCQHQGICVRFLDRYQCDCTTGYSGPNCTIP............... 72
73 -9.4403eto_A mol:protein length:242 Neurogenic locus notch homolog protein 1  ali model follow..  16  4........ACELPECQGNKVCSLQCNNHAC----GWDGGDCSLNFQSLQCWKYFSDGHCDSQCNSAGC----LFDGFDCQRAEGQCNPKDHFSDGHCDQGCNSAEC----EWDGLDCAEH............... 120
74 -9.3705es4_B mol:protein length:727 Integrin beta-2  ali model follow..  28  481...........SIICSGLGDCVCG----QCLCHTSIYGQYCECDTINCERYNGPGRGLCFCG----KCRCHPGFEGSACQRTTEGCLNPRCSGRGRCRCN----VCECHSGYQLPLCQE................ 592
75 -9.3402mgr_A mol:protein length:99 Merozoite surface protein 1  ali model follow..  21  7VCVDTRDIP------KNAGCFRDDDGTKEWRCLLGYKKGEGNNNNPTCDINNCDPTASCQNAESTIICTCKEPTPNAYYE....................................................... 91

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.