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2L6H1
Query: 2L6H Entity 1(prereleased), from PDB0312

Results of FFAS03 search in PfamA26U
Master-slave alignment does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MANLDRSNDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDESLPVLPASTHREIEMAQKLLNSDLAELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKNLLDVIDQARLKMISQSRPHGSGSGSGSGGSGGSGGSGGSGGSGGSSATRELDELMASLSDLast
1 -69.500PF03623.8; Q4RY69_TETNG/821-958; Focal adhesion targeting region  ali follow..  51  2.AELDRAGDEVYTGVMAMVKQVVQLKNDITTLPSSEYPNSVKALGVTLRSLIQKVDEILPSLHHSVTTEIEGTKKLLNKDLGELISKMRLAQQNTVTSLKEDCQRQMLAAAHTLALDCKNLLDAVDQARVRA................................................ 132
2 -11.900PF12205.3; A2BG45_DANRE/622-746; G protein-coupled receptor kinase-interacting protein 1 C term  ali follow..  20  10......STEDVIRKTEQITKNIQELLRAAQENKHESFVPCAERIHVAVNEMAALFPK------RPRSETVRNSLRLLTSSANRLQTECKKASESSQASDMQLVTQQVIQCAYDIAKAAKQLVTITT...................................................... 125
3 -8.850PF01608.12; Q5KGN0_CRYNE/884-1077; I/LWEQ domain  ali follow..  14  2.......HDAILQATLAITNAIGRLIQAATESQTEGLISAAKAVAYATGLLIESADGVIS---THSLEQLIVASNEVSAATAQLVAASRV-----KASLMSKSQQLLELAAKAVTDACKALVKQVKLI.................................................... 138
4 -8.540PF01044.14; CTNA2_CHICK/18-867; Vinculin family  ali follow..  16  6..TVERLLEPLVTQVTTLVNTSNKGPSGKKKGRSKKAHVLAASVEQATQNFLEKGDQIAKE-SQDLKEELVAAVEDVRKQGETMRIA---SSEFADDPCSSVKRGTMVRAARALLSAVTRLLILADMADVM................................................. 130
5 -7.560PF08913.5; Q3TBC3_MOUSE/359-483; Vinculin Binding Site  ali follow..  13  1..SFVDYQTTMVRTAKAIAVTVQEMVTKSN-TSPEELGPLANQLTSDYGRLASQAKPAAVAAENEIGAHIKHRVQELGHGCSALVTKAGAL---QCSPSDVYTKKELIECARRVSEKVSHVLAALQAG.................................................... 123
6 -6.670PF01865.11; Y1389_PYRHO/1-210; Protein of unknown function DUF47 topsan  ali follow..  12  80YVRLSELIDNVADAAESAAHSLMFAKPIVPKGLEDEIIRLVDESLKTFEYLKGATLALEDSVDDALMLAKKTETQEEDADKIEYDLLRKIFSREDISTYAKLIWNQVITKIGDVADRAEDASDQIMLIAIK................................................. 210
7 -6.550PF06840.6; Q9VF70_DROME/3-157; Protein of unknown function (DUF1241 topsan)  ali follow..  18  94.........ELNRKSVALKVILSRIPDEINDRKT--FLETIKEIASAIKKLLDVVNEIGSFIPGVTGKQ............................................................................................................... 151
8 -6.420PF07295.6; Q0HLI9_SHESM/19-164; Protein of unknown function (DUF1451 topsan)  ali follow..  11  3..................................AQFAEDNSLTAKNLFKSVTQGKEFLRLKEQAGEDELALVEQFLKRDIASFLRE--LSHSPTVITLENTLWHWLSEITDRSQVEWHELTQDFKH..................................................... 98
9 -6.100PF03866.8; HAPP_PHYPO/1-164; Hydrophobic abundant protein (HAP)  ali follow..  16  38.................LVGCVVALVANIVGGLLRVIIGLVVTLSGVLQIVVGTVLGLVATVASLALDVVGSTVGGILNSLLGLGAILSLVEEVLHVLLSQALLTGLVNAIFALPLSLLVALSTLTDA.................................................... 148
10 -6.090PF12026.3; Q4T8T0_TETNG/484-704; Domain of unknown function (DUF3513 topsan)  ali follow..  18  113................TVTNAIDAFFTSLNSNQPPKFVAHSKFVILSAHKLVFIGDTLSRQAKAAEVRRVAQSSNALCEKLKDIVLSTKTALQYPSAGAARE----MSERVKELGGCTQHFRTVL....................................................... 220

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Lesley SA, Kuhn P, Godzik A., Deacon AM, Mathews I, Kreusch A, Spraggon G, Klock HE, McMullan D, Shin T, Vincent J, Robb A, Brinen LS, Miller MD, McPhillips TM, Miller MA, Scheibe D, Canaves JM, Guda C, Jaroszewski L, Selby TL, Elsliger MA, Wooley J, Taylor SS, Hodgson KO, Wilson IA, Schultz PG, Stevens RC. Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline. Proc Natl Acad Sci U S A. 2002 Sep 3;99(18):11664-9. Epub 2002 Aug 22.