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Query: 4abn_A mol:protein length:474 TETRATRICOPEPTIDE REPEAT PROTEIN 5, from PDB0516

Results of FFAS03 search in PDB0516
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGSSSSGLVPRGSHMASMTGGQQMGRGSMMADEEEEAKHVLQKLQGLVDRLYCFRDSYFETHSVEDAGRKQQDVQEEMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLLESKGKTKPKKLQSMLGSLRPAHLGPCGDGRYQSASGQKMTLELKPLSTLQPGVNSGTVVLGKVVFSLTTEEKVPFTFGLVDSDGPCYAVMVYNVVQSWGVLIGDSVAIPEPNLRHHQIRHKGKDYSFSSVRVETPLLLVVNGKPQNSSSQASATVASRPQCELast
1 -139.0004abn_A mol:protein length:474 TETRATRICOPEPTIDE REPEAT PROTEIN 5  ali model  100  1MGSSSSGLVPRGSHMASMTGGQQMGRGSMMADEEEEAKHVLQKLQGLVDRLYCFRDSYFETHSVEDAGRKQQDVQEEMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLLESKGKTKPKKLQSMLGSLRPAHLGPCGDGRYQSASGQKMTLELKPLSTLQPGVNSGTVVLGKVVFSLTTEEKVPFTFGLVDSDGPCYAVMVYNVVQSWGVLIGDSVAIPEPNLRHHQIRHKGKDYSFSSVRVETPLLLVVNGKPQNSSSQASATVASRPQCE 468
2 -61.7001w3b_A mol:protein length:388 UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUC  ali model follow..  14  22.CMQLWRQEPDNTGVLLLL--------SSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQ-------LQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDM-EGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNAVAWSNLGCVFNAQG---------EIWLAIHHFEKAVTLDPNFLDAYINLGNVL--------KEARIFDRAVAAYLRALSLSP---NHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALE------VFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEM............................................................. 386
3 -56.1003cvq_A mol:protein length:327 Peroxisome targeting signal 1 receptor PEX5  ali model follow..  10  1..................................GHMLQNNTDYPFEANNPYMYHENPMEEGLSMLKLAN-------LAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKD-GLAIIALNHARALDPADIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLY--------NLSNNYDSAAANLRRAVELRP---DDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREAT----------------------------RSMWDFFRMLLNVMNRPDLVELTYAQNVEPFAKEFGLQSML.................................................................... 326
4 -55.4002gw1_A mol:protein length:514 Mitochondrial precursor proteins import recep  ali model follow..  11  29.YNWALELKED---------PVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANEGLGKFADAMSKLKEKFGDIDTATATPTELSTQPAKERKDKQENLPSVEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPLGAHEDIKKAIELFPRVNSYIYMALIMADR---------NDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFIL--------QNYDQAGKDFDKAKELDP---ENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKVENFIEATNLLEKASK------LDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAAKVQQRIRSDPVLAKKIQ............................................. 512
5 -55.4003cv0_A mol:protein length:327 Peroxisome targeting signal 1 receptor PEX5  ali model follow..  11  1..................................GHMLQNNTDYPFEANNPYMYHENPMEEGLSMLKLAN-------LAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKD-GLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLS--------NNYDSAAANLRRAVELRP---DDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPWDFFRMLLNVMNRPDLVELTYAQNVEPFAKEGLQSML............................................................................................................. 326
6 -55.1001xnf_A mol:protein length:275 Lipoprotein nlpI  ali model follow..  1........SNTSWRKSEVL--------AVPLQPTLQQEVILARMEQILAS-DERAQLLYERGVLYDSLGL-------RALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNF-DAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPRSLWLYLAEQKLDE------KQAKEVLKQHFEKSDKEQWGWNIVEFYLGNI---------SEQTLMERLKADATDNTSLAE---HLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQDQDDLAESDQ............................................................................................................................................................. 274
7 -54.4003hym_B mol:protein length:330 Cell division cycle protein 16 homolog  ali model follow..  11  11.IPESVDGLQENLDVVVSLAERHY--------YNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNK-------ANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGHLPMLYIGLEYGLT---------NNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQN--------GEWKTAEKWFLDALEKIKAVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGAD............................................................................................................................ 328
8 -54.3001fch_A mol:protein length:368 PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR  ali model follow..  3.FERAKSAIESDVDFWDKLQAEAKRDAEAHPWLSDYDDLTSATYDKGYQFEEEDHPQPFEEGLRRLQEG-------DLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQE-LLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAAHLVTPAEEGAGGKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPQCGLGVLF--------NLSGEYDKAVDCFTAALSVRP---NDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAALSMLGQSDAYGAADARDLSTLLTM................................................................................................................... 363
9 -54.1003fp2_A mol:protein length:537 TPR repeat-containing protein YHR117W  ali model follow..  10  48.YQYAIELDPNEPVFYSNISA--------CYISTGDLEKVIEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLSVLSKDEGRGSQVLPSNTSLASFFGSSVNTSSNYDHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPTPNSYIFLALTLADK---------ENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFIL--------QDYKNAKEDFQKAQSLNP---ENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKEEKFNAAIKLLTKACE------LDPRSEQAKIGLAQLKLQMEKIDEAIELFEDSAILARTMDEKLQATTFAEAAKIQKRLR....................................................... 515
10 -53.1005a31_C mol:protein length:597 CELL DIVISION CYCLE PROTEIN 23 HOMOLOG  ali model follow..  161.LHQARELDG-----------FGLYLYGVVLRKLDLVKEAIDVFVEATHVLPLHWGAWLELCNLITDKEMLKTELQLIEEALQKYQNLIDVGSKSSYIVSQIAVAYHNIRDI-DKALSIFNELRKQDPYRIENMDTFSNLLYVRSMKSELSYLAHNLCEIDKYRETCCVIGNYYSLR---------SQHEKAALYFQRALKLNPRYLGAWTLMGHEYM--------EMKNTSAAIQAYRHAIEVNK---RDYRAWYGLGQTYEILKMPFYCLYYYRRAHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWRAYAVGDVEKMALVKLAKLHEQLTESEQAAQCYIKYIQDIYSCVEHLEESTAFRYLAQYYFKCKLWDEASTCAQKCCAFNDTREEGKALLRQILQLRNQGETPTTE-VPAPFFLPASLSANNTPTRRVSP............................ 589
11 -53.1004ui9_F mol:protein length:824 CELL DIVISION CYCLE PROTEIN 27 HOMOLOG  ali model follow..  11  404IPNRKTKSKTNKGGITQPNI--------NDSLEITKLDSSIISEGKISTITPQIQAFNLQKAAAEGLMSLLREMGKNCKESINILSHLPSHHYNTGWVLCQIGRAYFELSEY-MQAERIFSEVRRIENYRVEGMEIYSTTLWHLQKDVALSVLSKDLTDMDKNSEAWCAAGNCFSLQ---------REHDIAIKFFQRAIQVDPNYAYAYTLLGHEFV--------LTEELDKALACFRNAIRVNP---RHYNAWYGLGMIYYKQEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDTLNKAIVIDPKNPLCKFHRASVLFANEKYKSALQELEELKQ------IVPKESLVYFLIGKVYKKLGQTHLALMNFSWAMDLDPKGANNQIKEAIDKRYLPDDEEPITQ-EEQIMGTDESQESSMTDADDT.............................. 814
12 -52.7004eqf_A mol:protein length:365 PEX5-related protein  ali model follow..  12  12.VESDTEFWDKMQAEW----EEMARRNWISENQEAQNQVTVSASEKGYYFHTEDWPGAFEEGLKRLKEG-------DLPVTILFMEAAILQDPGDAEAWQFLGITQAENENE-QAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKKYLVKNKKGSPGLT---------RRMSKSPVDSSVLEGVKELDPDLQTGLGVLF--------HLSGEFNRAIDAFNAALTVRP---EDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNAANLGDLDVLLRAFNLDP..................................................................................................................... 365
13 -51.9003r9a_B mol:protein length:328 Peroxisomal targeting signal 1 receptor  ali model follow..  11  9.YDKGYQFEEENPLRDH----PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAE-------NEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQ-RQACETLRDWLRYTPAYAHLVTPAEGSLLSDSLFLEVKELFLAAVRLDPTPDVQCGLGVLFNLSG---------EYDKAVDCFTAALSVRPNDYLLWNKLGATL--------ANGNQSEEAVAAYRRALELQP---GYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPWSTLRLALSMLGQSDAYGAADARDLSTLLTM..................................................................................................................................................... 323
14 -51.3002pl2_A mol:protein length:217 Hypothetical conserved protein TTC0263  ali model follow..  17  2............................................................................................QTAEQNPLRLGVQLYALGRY-DAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYGGYMVLSEAYVALYREDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVY--------ALLGERDKAEASLKQALALED----TPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLLKGKAEEAARAAA.............................................................................................................................................................. 209
15 -51.3002q7f_A mol:protein length:243 YrrB protein  ali model follow..  18  2....................................GSSSSGLVPRGSHMASMTGGQQMGRGSE----------FGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNEL-ERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENDLFYMLGTVLVKL---------EQPKLALPYLQRAVELNENDTEARFQFGMCL--------ANEGMLDEALSQFAAVTEQDP---GHADAFYNAGVTYAYKENREKALEMLDKAIDIQPDHMLALHAKKLL............................................................................................................................................................................. 230
16 -51.0004rg6_A mol:protein length:560 Cell division cycle protein 27 homolog  ali model follow..  12  140.YQKSLSLNPFLWSPFESLC-EIGEKPDPDQTFKFTSLQNFSNCLPQIQAFNLQKAAAEGLMSLLREMGKGYLASYNCKEAINILSHLPSHHYNTGWVLCQIGRAYFELSEY-MQAERIFSEVRRIENYRVEGMEIYSTTLWHLQKDVALSVLSKDLTDMDKNSEAWCAAGNCFSLQ---------REHDIAIKFFQRAIQVDPNYAYAYTLLGHEFVLT--------EELDKALACFRNAIRVNP---RHYNAWYGLGMIYYKQEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDTLNKAIVIDPKNPLCKFHRASVLFANEKYKSALQELEELKQ------IVPKESLVYFLIGKVYKKLGQTHLALMNFSWAMDLDPKGANNQIKEAIDKRYLPDDEEPI-TQEEQIMGTDESQESSMTD.................................. 546
17 -50.3003u4t_A mol:protein length:272 TPR repeat-containing protein  ali model follow..  11  1..................MNDDVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIET----YFSKVNATKAKSADFEYYGKILMKKGQD-SLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDKVFYELGQAYYY---------NKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQ-----DPDTKQGLAKPYYEKLIEVCAPGGAKIEANEYIAYYYTINRDKVKADAAWKNILALDPTNKKAIDGLKMKLE........................................................................................................................................................................... 266
18 -50.2004g1t_A mol:protein length:472 Interferon-induced protein with tetratricopep  ali model follow..  10  40.YRTEFQNREFKATMCNLL--------AYLKHLKGQNEAALECLRKAEELIQQSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVFSSPYRIESPELDCEEGWTRLKCGGNQN-ERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWQNAIDPLRQAIRLNPDNQLKVLLALKLHKMR-----EEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRK--------DEPDKAIELLKKALEYIP---NNAYLHCQIGCCYRAKELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQL--NFQLYQMKCEDKAIHHFIEGVKINQKSSKNGADSEALHVLAFLQELNEKMQQADEDSERGLESGSLIPSASSWNGE.................................................................. 472
19 -50.1004ui9_J mol:protein length:620 CELL DIVISION CYCLE PROTEIN 16 HOMOLOG  ali model follow..  10  153.YKEALKLDVYCFEAFDLLTSHHMLTAQEEKELLESLPESVNGLEKNLDVVVSLAERHYYNCDFKMCYKLTSVVMEKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGHLPMLYIGLEYGLT---------NNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQN--------GEWKTAEKWFLDALEKEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGADIKDKLKCYDF-----VHTMKTLKNIISPPWDFREFEVEKQTAEETGLTPLETSRKTPDSR-----------PSLEETFEIEMNESDMMLE.................................. 612
20 -50.0003ieg_A mol:protein length:359 DnaJ homolog subfamily C member 3  ali model follow..  10  16..........................................................................AGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKS-KAALPDLTKVIALKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKE--------GEPRKAISDLKAASKLKS---DNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLDGRYTDATSKYESVMKTEPSTVRSKERICHCFSKDEKPVEAIRICSEVLQ------MEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQSQ......................................................... 357
21 -49.8003as8_A mol:protein length:186 Magnetosome protein MamA  ali model follow..  19  1........................................................................................MGNDDIRQVYYRDKGISHAKAGRY-SEAVVMLEQVYDADAFDVEVALHLGIAYVKTGAVDRGTELLERSIADAPDNKVATVLGLTYVQVQ---------KYDLAVPLLVKVAEANPVNFNVRFRLGVAL--------DNLGRFDEAIDSFKIALGLRP---NEGKVHRAIAYSYEQMGSHEEALPHFKKANELDERSAVELALVPR.............................................................................................................................................................................. 186
22 -49.5003urz_A mol:protein length:208 Uncharacterized protein  ali model follow..  12  1............................................................................................GQSVDEMLQKVSAAIEAGQN-GQAVSYFRQTIALNIDRTEMYTELALAYKKNRNYDKAYLFYKELLQKAPNNDCLEACAEMQVCRG---------QEKDALRMYEKILQLEADNLAANIFLGNYYYLT--------EQEKKKLETDYKKLSSPT---KMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTEAQKT-----LDKILRIEKEVNR................................................................................................................................................................ 208
23 -49.3003zgq_A mol:protein length:482 INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEP  ali model follow..  10  40.QQLEFLTTKSRLALYNLL--------AYVKHLKGQNKDALECLEQAEEIIQNYAWVYYHMDQLEEAQKYTGKIGNYYQKAKAAFEKALEVEPDNPEFNIGYAITVYRLDDSDSFSLGPLRKAVTLNPDNSYIKVFLALKLQDVHAEAEGEKYIEEILDQISSPYVLRYAAKFYRRKN---------SWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMIQIKKVDELISSAIFHFKAAMERDS---MFAFAYTDLANMYAEGGQYSNAEDIFRKALRLENITDDHKHQIHYHYGRFKSENTAIHHYLEALKVKDRSPL----------RTKLTSALKKLSTKRLC------HNALDVQSLSALGFVYKLEGEKRQAAEYYEKAQKIDPENAEFLTALCELRLSI............................................................. 482
24 -49.3003vtx_A mol:protein length:184 MamA  ali model follow..  14  2............................................................................................GETTTIYMDIGDKKRTKGDF-DGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTAEAYYILGSANFMID---------EKQAAIDALQRAIALNTVYADAYYKLGLVY--------DSMGEHDKAIEAYEKTISIKP---GFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKK--AKYELALVPR........................................................................................................................................................................... 184
25 -49.2003asg_A mol:protein length:186 MamA  ali model follow..  18  1........................................................................................MGNDDIRQVYYRDKGISHAKAGRY-SQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNKVATVLGLTYVQVQ---------KYDLAVPLLIKVAEANPINFNVRFRLGVAL--------KNLGRFDEAIDSFKIALGLRP---NEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEGASVELALVPR.............................................................................................................................................................................. 186
26 -48.3005dse_A mol:protein length:837 Tetratricopeptide repeat protein 7B  ali model follow..  10  380.LERAMKFAFEEFHLWYQFA--------LSLMAAGKSARAVKVLKECIRLKPDDATIPLLAAKL--------GSLHWLEEAEKFAKTVVDVGEKTAKGYLALGLTYSLQAVLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQGDDNSLHLLALLL---------SAQKHYHDALNIIDMALSEYPENFILLFSKVKLQSLC--------RGPDEALLTCKHMLQIWKSCMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQIAELRGSMDEARRWYEEALAISPTHVKSMQRLALILHQLGRYSLAEKILRDAVQ------VNSTAHEVWNGLGEVLQAQGNDAAATECFLTALELEASSPAVPFTI.................................................................... 832
27 -48.1004hou_A mol:protein length:273 Interferon-induced protein with tetratricopep  ali model follow..  11  1............................................DHQVKDSLEQLRCHFTWE------------LSIDDDEMPDLENRVLDTKYSVGIHNLLAYVKHLKGQN-EEALKSLKEAENLNVRSLVTWGNFAWMYYHMGRLAEAQTYLDKVENICKKLSN--ECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAGYAISAYRLDGFKLATKNHKPFSLLPLRQAVRLNP---DNGYIKVLLALKLQDEGQEAEGEKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQ.......................................................................................................................................................... 273
28 -47.9002xvs_A mol:protein length:166 TETRATRICOPEPTIDE REPEAT PROTEIN 5  ali model follow..  90  1..............................................................................................................................................................................................................................................................................................SMRQREQQLLEFLDRLTSLLESKGKVKTKKLQSMLGSLRPAHLGPCSDGHYQSASGQKVTLELKPLSTLQPGVNSGAVILGKVVFSLTTEEKVPFTFGLVDSDGPCYAVMVYNIVQSWGVLIGDSVAIPEPNLRLHRIQHKGKDYSFSSVRVETPLLLVVNGKPQG................ 166
29 -47.8003uq3_A mol:protein length:258 Heat shock protein STI1  ali model follow..  13  1........GGSMADKEKAEGNKFYK-------------------------------------------------ARQFDEAIEHYNKAWELHKD-ITYLNNRAAAEYEKGEY-ETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKL---------RNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTK--------SDWPNAVKAYTEMIKRAP---EDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQ................................................................................................................................... 258
30 -46.9004xi0_A mol:protein length:202 Magnetosome protein MamA  ali model follow..  17  2..........................................................................................AMGDKAKLYRNISQRCLRRGSP-EEALRYLKEWARHEKNDPEPLYQMGIALANLGDYQRAVTVFDKVLKLRPNHMASYRKGAVLLKI---------KQYKLALPVLEAVVAAAPADARAYYLLGLAY--------DGDEQLEKGIEAMQKAVDLDP---EEIKYHQHLGFMNVRKDDHKTAAEHFTKVMELERSQDSDEEELALVPRGSS........................................................................................................................................................................ 191
31 -46.8003v6p_A mol:protein length:442 dHax3  ali model follow..  10  13LTGAPLNLTPEQVVAIASHDGVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQAL-------ETVQALLPVLCQAHGLTPEQVVAIASNGGGKQALETV-QRLLPVLCQAHGLTPQQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQ--------VVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNSGGK--------QALETVQRLLPVLCQAHGLTP---QQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHG------LTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGRPALESIVAQLSR-PDPALAALTNDHLLE.................................... 436
32 -46.7003asd_A mol:protein length:200 MamA  ali model follow..  17  1........................................................................................MGNDDIRQVYYEDKGISHAKAGRY-SQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNKVATVLGLTYVQVQ---------KYDLAVPLLIKVAEANPINFNVRFRLGVAL--------DNLGRFDEAIDSFKIALGLRP---NEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEGASVALVPRGSS............................................................................................................................................................................. 189
33 -46.7004buj_B mol:protein length:1436 SUPERKILLER PROTEIN 3  ali model follow..  10  417VLTENIVKCKNNILAHRILC--------QYYLLTKEYEAALPYIKNGISLIAYNIKDL-EFSLDLATVYTYVDAPKDHNAALKLYDNILSGDFSNIQAKMGKGIIFIERKNW-KDAMTLLTQVHEQSPNNLEVLSELSWSKAHMGYMDEALAGLDTVIKGIKGMDNLWRQAKVYIMKHASINDAKQENVKCAFKLLIQSIKILDTFAPGFSTLGDIYCHY-------YKDHLRAFKCYFKAFDLDA---GDYTAAKYITETYASKPNWQAASSIASRLIKGEKAKAEPFRVVGIAHLEKQEESDSIEWFQSALRVDPNDVESWVGLGQAYHACGRIEASIKVFDKAIQ------LRPSHTFAQYFKAISLCDVGEYLESLDILEKVCQEAATEESFQIGLVEVL................................................................ 818
34 -46.4004uzy_A mol:protein length:651 FLAGELLAR ASSOCIATED PROTEIN  ali model follow..  5MAFFQQPARPIAEGQYTQTI--------YTLIKEQKFAEAIQHLQYQLQNVPESRAALSLLGYCYYYTG-------QYDMASQMYEQLVTLYPSNEDYKLYYAQSLYKGGMYPEDLTGCRRQLDKCAPEDPDTMVNTGCIMFKEGKFEAARQKFNDAVQALGYPELLYNIALCYYKTK---------QFGPALKHLAEAVREHPELSVGSNTDGMEVRSV--AIEYTMKNVEAAKEALTDMPPRAE---EELDPVTLHNALINMDSDPTGGFKKLNFLLQSPPFPPETFANLQAAIGRYKSPEEAFRRFDELATRHVEQLRRLTKQ-----QDARIARDNDAIKRAINEYD--EALEAYIPGLMAMASIYWDMELYSNVEKIFRQSAEFCSEHEVWKLNVAHTFFMQDNHYKEAIRYYEPVVKKNADNLLGVTAIVLANLCVSYIMTSQNEEAEELMRKVEKEEER.. 525
35 -46.1004i17_A mol:protein length:228 hypothetical protein  ali model follow..  13  1......GAQTTDPNQLKNEGNDALN-------------------------------------------------AKNYAVAFEKYSEYLKLTNNQDSVAYNCGVCADNIKKY-KEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKL-YAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKTDALYSLGVLF-------------YNNGADVLRKATPLAS---SNKEKYASEKAKA--DAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVKAMIK........................................................................................................................................................................ 228
36 -45.8002xpi_A mol:protein length:597 ANAPHASE-PROMOTING COMPLEX SUBUNIT CUT9  ali model follow..  10  223.YKEALMVDAKCYEAFDQLVSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESG-------EKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKI-SEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGHLPYLFLGMQHMQLG---------NILLANEYLQSSYALFQYDPLLLNELGVVAF--------NKSDMQTAINHFQNALLLVKKEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLHESLAISPNEIMASDLLKRALEEN....................................................................................................................................... 597
37 -45.5005aio_A mol:protein length:448 TRANSCRIPTION FACTOR TAU 131 KDA SUBUNIT  ali model follow..  10  2...AMAVLDPEVAQLLSQ---------ANEAFVRNDLQVAERLFNEVIKKDARNFAAYETLGDIYQLQG-------RLNDCCNSWFLAAHLNASDWEFWKIVAILSADLDHV-RQAIYCFSRVISLNPMEWESIYRRSMLYKKTGQLARALDGFQRLYMYNPDANILRELAILYVDYD---------RIEDSIELYMKVFNANVERREAILAALENALDSSDEESANTDNLVEALNHFQCLYDETFS--DVADLYFEAATALTRAEKYKEAIDFFTPLLSLEERTTDVFKPLARCYKEIESYETAKEFYELAIKSEPDDLDIRVSLAEVYYRLNDPETFKHMLVDVVEMR...................................................................................................................... 448
38 -45.3004r7s_A mol:protein length:257 Tetratricopeptide repeat protein  ali model follow..  11  5.....................EELIEKSYDFVDKGDLVSAEESLKAAMRKEPANPLNY----ALLTNLGTIQRRQGKLQEALISYTSALSGHTKNITILENRASLYTELGET-EKALNDYNTLLIENPEHQEALYCRGLLYIQLQNYMWAEQDFDKILEVNEKSRARLGHAILEKMRG---------NYDESERIFNYLISEMPRDWILYEGRADLYFMM--------GKNARAMADIEKVFTESE---PTANLYVLRGKIKLAQYEKERAALDFKKAESMGYNKEVIKELLKLTMN........................................................................................................................................................................... 256
39 -44.9005a31_X mol:protein length:599 ANAPHASE-PROMOTING COMPLEX SUBUNIT 7  ali model follow..  125.STPQSQCLPSEIEVKYKLAPKINMMLANLYKKAGQERPSVTSYKEVLRQCPLALDAILGLLSLSVKGAEVASMTGDNSRAISTICEKKSLLRDNVDLLGSLADLYFRAGDN-KNSVLKFEQAQMLDPYLIKGMDVYGYLLAREGRLEDVENLGCRLFNISDQAEPWVVSGCHSFYS---------KRYSRALYLGAKAIQLNSNSVQALLLKGAALRNM--------GRVQEAIIHFREAIRLAP---CRLDCYEGLIECYLASNSIREAMVMANNVYKTLGANAQTLTLLATVLEDPVTQEKAKTLLNKALTQEPDYIKAVVKKAELLSREQKYEDGIALLRNALANQSDCVL-------HRILGDFLVAVNEYQEAMDQYSIALSLDPNDQKSLEGMQKMEKEESPTDATQ-EEDVDDMEGSGEEGDLEGS.................................. 582
40 -44.7002fo7_A mol:protein length:136 SYNTHETIC CONSENSUS TPR PROTEIN  ali model follow..  26  1..................................................................................................................................AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRAEAWYNLGNAYYKQG---------DYDEAIEYYQKALELDPRSAEAWYNLGNAY--------YKQGDYDEAIEYYQKALELDP---RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR........................................................................................................................................................................................ 135
41 -44.4004kvm_A mol:protein length:734 N-terminal acetyltransferase A complex subuni  ali model follow..  10  33.IEPLLERHPEHGESLAIK--------GILLHSLGNTKEGYDNVRLGLRNDVGSGVCWHIFGLISRA-------DKDYVQAAKCYINAHKLEKNNSSLLRDLALLQSQLRQY-KALADTRNALLQDNPGVRANWSALAVAQFLRGEYASAYKIVDAFESTINQSEAMLFMNLVILKKDRAEYELYLSKMEEAKSTIYLLLDRNPDNHQYYYNLQRAYVKSLYKDTKKCKVVEDLVSKYASSLSTTNKFSEDDDTYYFLAQHFDHVGELEKAEKYVDLAIDHTPTLVELFMTKARISKHKGELQTAMEIMDHARKLDLQDRFINGKCAKYMLRNDENELAAKTVSLFTRNEAVGGAVGDLADMMLEDGKSFARQKKFALALKRFSTVFKIFDTWADDQFD..................................................................... 532
42 -42.9002vq2_A mol:protein length:225 PUTATIVE FIMBRIAL BIOGENESIS AND TWITCHING MO  ali model follow..  13  2............................................................................................................................EKANQVSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKELAWLVRAEIYQYLK---------VNDKAQESFRQALSIKPDSAEINNNYGWFLC-------GRLNRPAESMAYFDKALA-DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQAN------PYSEELQTVLTG.................................................................................................... 224
43 -42.8002ho1_A mol:protein length:252 Type 4 fimbrial biogenesis protein PilF  ali model follow..  17  9.........................................................................VPRGSHMGDQNPLKTDKGRDEARDAYIQLGLGYLQRGNT-EQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRARVLNNYGGFLYEQK---------RYEEAYQRLLEASQLYPERSRVFENLGLVSL--------QMKKPAQAKEYFEKSLRLNR---NQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGSLEYQEFQA............................................................................................................................................. 244
44 -42.6002fi7_A mol:protein length:265 type 4 fimbrial biogenesis protein PilF  ali model follow..  17  22.........................................................................QQMGRTSGDQNPLKTDKGRDEARDAYIQLGLGYLQRGNT-EQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRARVLNNYGGFLYEQK---------RYEEAYQRLLEASQLYPERSRVFENLGLVSL--------QMKKPAQAKEYFEKSLRLNR---NQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGSLEYQEFQA............................................................................................................................................. 257
45 -42.1002y4t_A mol:protein length:450 DNAJ HOMOLOG SUBFAMILY C MEMBER 3  ali model follow..  10  43.FHAAVDGDPDNYIAYYRR--------ATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKAIAFLDKILEVCVWDAELRELRAECFIKEGEP-RKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIARSKERICHCFSKD--------EKPVEAIRVCSEVLQMEP---DNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEII-DNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDG.......................................................................................................... 444
46 -42.1004ynw_A mol:protein length:339 ACL4  ali model follow..  11  1.................SMAPTKPKNKSKKSKDRARLKVASSQTSINPKELLDRATTLLEEG--------------DIETAAKVARTAYEHIGENGAALTLLGQIHVELGDI-DAARNYYAAAVKVDEDGSLPEELGGGPFLWLAQLHDSVAWFERGATVLRARRRLAETLCAVVEVYMTDLSWEDDAEQRCEALITEATMIAPEWPETWQTVANVRISQ--------ERTEEAREALRRSLGLWTHLPPE-PSRVSLVRLLIEVDMEEEALEVTERLIAEDDLSVEVWYLGGYARYRLGEKEREASGQASEPEAWKDTWRSSRK............................................................................................................................................... 328
47 -41.7001wm5_A mol:protein length:208 Neutrophil cytosol factor 2  ali model follow..  14  2...AMGSMSLVEAISLWNEGVLAAD-------------------------------------------------KKDWKGALDAFSAVQ---DPHSRICFNIGCMYTILKNM-TEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRG--------------------------NQLIDYKILGLQFKLFACEVLYNIAFMYA--------KKEEWKKAEEQLALATSMKSEPRH---------------SKIDKAMECVWKQKLYEPVVI----PVGKLFRPNERQVAQLAKKD.............................................................................................................................................................. 202
48 -41.3002hr2_A mol:protein length:159 Hypothetical protein  ali model follow..  14  1..........................................................................................................................GMKPLKEVVGAYLALAQRQLVAGEYDEAAANCRRAMEISHTMPP------------------------------EEAFDHAGFDAFCHAGLAEAL--------AGLRSFDEALHSADKALHYFNRNQDEGKLWYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDRIAQLGA................................................................................................................................................................ 158
49 -40.7001hh8_A mol:protein length:213 NEUTROPHIL CYTOSOL FACTOR 2  ali model follow..  13  19..........................................................................KKDWKGALDAFSAVQ---DPHSRICFNIGCMYTILKNM-TEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRG--------------------------NQLIDYKILGLQFKLFACEVLYNIAFMYA--------KKEEWKKAEEQLALATSMKS---EPRHSKIDKAMEVWKQKLYEPVVIPVGRLFRPNERQVAQLAKKD----YLGKATVVAS................................................................................................................................................................. 207
50 -40.2004XNH Entity 1(prereleased)  ali follow..  9.PKPAAKIALKKENDQFLEALKLY--------EGKQYKKSLKLLDAILKKDGSHVDSLALKGLDLYSVGEKDDAASYVANAI----RKIEGASASPICCHVLGIYMRNTKEY-KESIKWFTAALNNGSTNKQIYRDLATLQSQIGDFKNALVSRKKYWEAFLGYANWTSLAVAQDVNG------ERQQAINTLSQFEKLAEGKISDSEKYEHSECLMYKNDIMYKAASDNQDKLQNVLKHLNDIEPCVFDKFGLLERKATIYMKLGQLKDASIVYRTLIKRNPDNFKYYKLLEVSLGIQGDNKLKKALYGKLEQFYPRCEPPKFIPLTFLQDKEELSKKLREYVLPQLERGVPATFSNVKPTNYYLSQHFLFLKDFPKAQEYIDAALDHTPTLVEFYILKARILKHLGLMDTAA-GILEEGRQLDLQDRFINCKTVK------YFLRANNIDKAVEVASLFTKNDDSV 485
51 -40.1004ga2_A mol:protein length:150 E3 SUMO-PROTEIN LIGASE RANBP2  ali model follow..  17  2.......................................................................................................................................PLGSMRRSKADVERYIASVQGSTPSPRQKIKGFYFAKLYYEA---------KEYDLAKKYICTYINVQERDPKAHRFLGLLY--------ELEENTDKAVECYRRSVELNP---TQKDLVLKIAELLCKNDVTDGRAKYWERAAKLFPGSPAVYKLKEQLLDCEGE....................................................................................................................................................................... 149
52 -39.8003pe3_A mol:protein length:723 UDP-N-acetylglucosamine--peptide N-acetylgluc  ali model follow..  13  1.......................................................................................GPGSCPTHADSLNNLANIKREQGNI-EEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFDAYSNMGNTLKEMQ---------DVQGALQCYTRAIQINPAFADAHSNLASIH--------KDSGNIPEAIASYRTALKLKP---DFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLS-HGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKLSDGRLRVGYVSSDF------GNHPTSHLMQSIPGMHNPDKFEVFCYALSPDDGTNFRVKVMAEANHFIDLSQIPCNGKAADRIHQDGIH-----ILVNMNGYTKGARNELFALRPAPIQAM...... 343
53 -39.8004osk_A mol:protein length:499 Hax3  ali model follow..  12  53LTGAPLNLTPEQVVAIASHD--------GGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQAL-------ETVQRLLPVLCQAHGLTPEQVVAIASNSGGKQALETV-QALLPVLCQAHGLTPEQVVAIASNSGGKQALETVQRLLPVLCQAHGLTPQQ--------VVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGK--------QALETVQRLLPVLCQAHGLTP---QQVVAIASNSGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGKQALETVQRLLPVLCQAHG------LTPEQVVAIASNSGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNNGGKQALETVQRLLPV-LCQAHGLTPQ......................................... 437
54 -39.6003v6t_A mol:protein length:499 dHax3  ali model follow..  10  21.RGPPLQLDTGQLLKIAKRGGVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQAL-------ETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETV-QALLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVAIASNGGGKQALENGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNSGGK--------QALETVQRLLPVLCQAHGLTP---QQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHG------LTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGRPALESIVAQLSR-PDPALAALTNDHLVALAC................................. 480
55 -39.5004ga0_A mol:protein length:150 E3 SUMO-protein ligase RanBP2  ali model follow..  17  2.......................................................................................................................................PLGSMRRSKADVERYIASVQGSTPSPRQKMKGFYFAKLYYEA---------KEYDLAKKYICTYINVQERDPKAHRFLGLLY--------ELEENTDKAVECYRRSVELNP---TQKDLVLKIAELLCKNDVTDGRAKYLERAAKLFPGSPAIYKLKEQLLDCEGE....................................................................................................................................................................... 149
56 -39.0004gg4_A mol:protein length:499 Hax3  ali model follow..  11  53LTGAPLNLTPEQVVAIASHDG--------GKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRLLETVQALLPVLCQAHGLTPEQVVAIASNGGGKQALETV-QRLLPVLCQAHGLTPQQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQ--------VVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNIGGK--------QALETVQRLLPVLCQAHGLTP---QQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHG------LTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGRPALESIVAQLSR-PDPALAALTNDHLVALAC................................. 479
57 -39.0004j8d_A mol:protein length:175 Hsc70-interacting protein  ali model follow..  2.............................................................................................................................ARGGSDLEIDNEGVIEADTDAPQEMGDENAEITEAMMDEANEKK--------GAAIDALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFV--------KLQKPNAAIRDCDRAIEINP---DSAQPYKWRGKAHRLLGHWEEAARDLALACKLDYDEDASAMLRE-----VQPRAQKIAEHRRKYERKREERE................................................................................................................................................... 173
58 -38.7004ga1_A mol:protein length:150 E3 SUMO-PROTEIN LIGASE RANBP2  ali model follow..  18  2.......................................................................................................................................PLGSMRRSKADVERYIASVQGSTPSPRQKMKGFYFAKLYMEA---------KEYDLAKKYICTYINVQERDPKAHRFLGLLY--------ELEENTDKAVECYRRSVELNP---MQKDLVLKIAELLCKNDVTDGAKYWVERAAKLFPGSPAVYKLKEQLLDCEGE....................................................................................................................................................................... 149
59 -38.4001na0_A mol:protein length:125 designed protein CTPR3  ali model follow..  29  2............................................................................................................................AMDPNSAEAWYNLGNAYYKQGDYDEAIEYYQKAL------------------------------------------ELDPNNAEAWYNLGNAY--------YKQGDYDEAIEYYQKALELDP---NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG........................................................................................................................................................................ 125
60 -38.2004hnw_A mol:protein length:863 N-terminal acetyltransferase A complex subuni  ali model follow..  9.PKPAAKIALKKENDQFLEALKLY--------EGKQYKKSLKLLDAILKKDGSHVDSLALKGLDLYSVGEKDDAASYVANAI----RKIEGASASPICCHVLGIYMRNTKEY-KESIKWFTAALNNGSTNKQIYRDLATLQSQIGDFKNALVSRKKYWEAFLGRANWTSLAVAQDVNG------ERQQAINTLSQFEKLAEGKISDSEKYEHSECLMYKNDIMYKAASDNQDKLQNVLKHLNDIEPCVFDKFGLLERKATIYMKLGQLKDASIVYRTLIKRNPDNFKYYKLLEVSLGIQGDNKLKKALYGKLEQFYPRCEPPKFIPLTFLQDKEELSKKLREYVLPQLERGVPATFSNVKPTNYYLSQHFLFLKDFPKAQEYIDAALDHTPTLVEFYILKARILKHLGLMDTAA-GILEEGRQLDLQDRFINCKTVK------YFLRANNIDKAVEVASLFTKNDDSV 485
61 -38.0003kd7_A mol:protein length:125 CTPR390  ali model follow..  29  2............................................................................................................................AMDPNSAEAWKNLGNAYYKQGDYQKAIEYYQKAL------------------------------------------ELDPNNASAWYNLGNAY--------YKQGDYQKAIEYYQKALELDP---NNAKAWYRRGNAYYKQGDYQKAIEDYQKALELDPNNAKAKQNLGNAKQKQG........................................................................................................................................................................ 125
62 -37.9002wqh_A mol:protein length:125 CTPR3Y3  ali model follow..  27  2............................................................................................................................AMDPNSAEAWYNLGNAYYKQGDYDEAIEYYQKAL------------------------------------------ELYPNNAEAWYNLGNAY--------YKQGDYDEAIEYYQKALELYP---NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAKQNLGNAKQKQG........................................................................................................................................................................ 125
63 -37.9001zu2_A mol:protein length:158 Mitochondrial import receptor subunit TOM20-3  ali model follow..  13  2..................................................................................................................................PLGSMDTETEFDRILLFEQIRQDAENTYKSNPLADNLTRWGGVLLELSQHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFDETEAKHNFDLATQFFQQAVDEQP---DNTHYLKSLEMTAKAPQLHAEA---YKQGLGGS.......................................................................................................................................................................................... 152
64 -37.4001hxi_A mol:protein length:121 PEROXISOME TARGETING SIGNAL 1 RECEPTOR PEX5  ali model follow..  16  1..................................................................................................................QNNTDYPFEANNPYMYHENPMEEGLSMLKLANLAEAALAFEAVC------------------------------------------QKEPEREEAWRSLGLTQ--------AENEKDGLAIIALNHARMLDP---KDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQ..................................................................................................................................................................................... 120
65 -36.7002vgy_A mol:protein length:148 CHAPERONE SYCD  ali model follow..  11  5..................................................................................................................SGGGTIAMLNEISSDTLEQLYSLAFNQYQSGKYEDAHKVFQALCVLDHDSRFFLGLGACRQAMG---------QYDLAIHSYEEGAVMDIKEPRFPFHAAECLLQK--------GELAEAESGLFLAQELIANKPEFKELSTRVSSMLEAIKLKKEMKHE.................................................................................................................................................................................................. 148
66 -36.6004nrh_B mol:protein length:178 Chaperone SycD  ali model follow..  15  11...........................................................................NYLLEKIAASSKEDFPFPDDLESY-----LEGYVPDK-NIALDTYQKIFKISSEDLEKVYKEGYHAYLDKDYAKSITVFRWLV------------------------------------------FFNPFVSKFWFSLGASL--------HMSEQYSQALHAYGVTAVLRD---KDPYPHYYAYICYTLTNEHEEAEKALEMAWVRAQHKPLYNELKEEILDIRKH....................................................................................................................................................................... 177
67 -36.5004f3v_A mol:protein length:282 ESX-1 secretion system protein EccA1  ali model follow..  4.........TDRLASLFESA---------VSMLPMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGGL--------------YGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHLVAWMKAVVYGAA---------ERWTDVIDQVKSAGKWPDKAGAAGVAHGVAAA--------NLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPEPKVAAALKDPSYRLKTTTAEQIASRAD............................................................................................................................................................. 267
68 -36.3002vgx_A mol:protein length:148 CHAPERONE SYCD  ali model follow..  11  5..................................................................................................................SGGGTIAMLNEISSDTLEQLYSLAFNQYQSGKYEDAHKVFQALCVLDHDSRFFLGLGACRQAMG---------QYDLAIHSYSYGAVMDIKEPRFPFHAAECLLQK--------GELAEAESGLFLAQELIANKPEFKELSTRVSSMLEAIKLKKEMKHE.................................................................................................................................................................................................. 148
69 -36.2003mkr_A mol:protein length:291 Coatomer subunit epsilon  ali model follow..  15.YQQCINEAQRVKPSSPERDVERDVFLYRAYLAQRKYGVVLDEIKPSSAP-----QAVRMFAEYLASHSRRDAIVAELDREMSR-----SVDVTNTTFLLMAASIYFYDQNP-DAALRTLHQGDSL-----ECMAMTVQILLKLDRLDLARKELKKMQDQDEDALTQLATAWVSLAAGG-------EKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQ--------GRWEAAEGVLQEALDKDS---GHPETLINLVVLSQHLGKPPEVTNRYSQLKDAHRSHP-----IKEYRAKENDFDRLVLQYAPS............................................................................................................................................................ 291
70 -35.4003wxx_A mol:protein length:151 AcrH  ali model follow..  13  10..................................................................................................................QDGGTLAMLNDVSTDTLEQLYTLGFNQYHAGKHDEAHKIFQALCVLDHEARFFLGLGACRQALG---------QFRLAIDSYSYGAMMDLQEPRFPFHAAECLLQL--------GELEGAESGFHSAQLLAAAKPELAELAARAGIMLEVVKTKKDM..................................................................................................................................................................................................... 150
71 -35.2005a1v_Q mol:protein length:308 COATOMER SUBUNIT EPSILON  ali model follow..  8....AVSGGSGEVDELFDVKNAFY---------IGSYQQCINEAQRVKLSSPE------REVERDVFLYRAYLAQRKYGVVLDEIKPS---SAPELQAVRMFAEYLASENQR-DSIVLELDREMSVDVTNTTFLLMAASIYFHDQNPDAALRTLHQGD----GLECMAMTIQILLKL---------DRLDLARKELKKMQDQDEDATLTQLATAWVNLAV------GGEKLQEAYYIFQELADKCS---PTLLLLNGQAACHSAQGRWETAEGVLQEALDKDSGHPETLINLIVLSQHLGKPPEVTNRYSQLKDAHRAHPFI----KEYQAKENDFDRLAMQYAPSA......................................................................................................................... 308
72 -35.0004zlh_A mol:protein length:339 Lipopolysaccharide assembly protein B  ali model follow..  10  2.....................................DKAVDLFLDMLKEDTGTVEAHLTLGNLFRS-------RGEVDRAIRIHQTLMESYEQRLLAIQQLGRDYMAAGLY-DRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKAIDVAERLVKLGKDKQR-VEIAHFYCELALQ--HMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMAK--------GEYAKAVESLQRVISQDREL---SETLEMLQTCYQQLGKTAEWAEFLQRAVEENTG-ADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHMDYHLNEAEEGRAKESLMVLRDMVGEKV..................................................................................................................... 299
73 -35.0005a01_A mol:protein length:710 O-GLYCOSYLTRANSFERASE  ali model follow..  14  2..........................................................................................PCSNHADSLNNLANIKREQGYI-EEATRLYLKALEVFPDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPTADAYSNMGNTLKELQ---------DVSGALQCYTRAIQINPAFADAHSNLASIHKDS--------GNIPEAIQSYRTALKLKP---DFPDAYCNLAHCLQIVCDWTDYDIRMKKLVSIVTEQLEKNRLPSVHPHHSHDCRKAIAARHANLCLEKVHVLHKKPYNFLKKLPTKGRLRIGYLSSDFGNHPTSHL................................................................................................................. 252
74 -34.2001jcq_A mol:protein length:382 PROTEIN FARNESYLTRANSFERASE, ALPHA SUBUNIT  ali model follow..  17GQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVA--SPMDDGFVSLDSPSYVLYRDRAEWADIDPVPQNDGPNPVVQERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDANYHAWQHRQWVIQEF---------KLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNT--TGYNDRAVLEREVQYTLEMIKLVP---HNESAWNYLKGILQDRG-LSKYPNLLNQLLDLQPSHSSPYLIAFLV-NKEDILNKALELCEIAKEKDTIRKEYWRYIGRSLQSKHSTENDSPTNVQQEEF....................................................................................................................... 382
75 -34.2002xcb_A mol:protein length:142 REGULATORY PROTEIN PCRH  ali model follow..  13  5.....................................................................................................................GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHDARYFLGLGACRQSLG---------LYEQALQSYSYGALMDINEPRFPFHAAECHLQL--------GDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAVTARKD...................................................................................................................................................................................................... 141

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.