| | | | | | . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . |
| # |
Score |
Template |
Links and tools | %id | First |
GSHMGGVDVLAAVPLSEETEFKVELFVKPVIGNAEGTTPHYWSISSPLKTAEAANVTPDADTTVCYSLSQVAPPDIPNQVSECDMLIWELYRMETEVLVLPVLNAGILTTGGVGGIAGPQLYFWAVGGQPLDVLGLAPTEKYKGPAQYTVNPKTNGTVPHVYSSSETPKARVTNEKYSIESWVADPSRNDNCRYFGRMVGGAATPPVVSFSNNSTIPLLDENGIGILCLQGRLYITCADLLGVNKNRVHTGLSRFFRLHFRQRRVRN | Last |
| 1 | -143.000 | 3s7x_A mol:protein length:267 Major capsid protein VP1 |
ali model |
100 | 1 | GSHMGGVDVLAAVPLSEETEFKVELFVKPVIGNAEGTTPHYWSISSPLKTAEAANVTPDADTTVCYSLSQVAPPDIPNQVSECDMLIWELYRMETEVLVLPVLNAGILTTGGVGGIAGPQLYFWAVGGQPLDVLGLAPTEKYKGPAQYTVNPKTNGTVPHVYSSSETPKARVTNEKYSIESWVADPSRNDNCRYFGRMVGGAATPPVVSFSNNSTIPLLDENGIGILCLQGRLYITCADLLGVNKNRVHTGLSRFFRLHFRQRRVRN |
267 |
| 2 | -130.000 | 3s7v_A mol:protein length:277 Major capsid protein VP1 |
ali model follow.. |
71 | 1 | GSHMGGVEVLAAVPLSEETEFKVELFVKPVIGNTTAATPHYWSISSAIHDKESVEETPDADTTVCYSLAEIAPPDIPNQVSECDMKVWELYRMETELLVVPLVNALGNTNGVVHGLAGTQLYFWAVGGQPLDVVGVTPTDKYKGPTTYTINPP--GDPRTLHVYNSNTPKAKVTSEYSVESWAPDPSRNDNCRYFGRVVGGAATPPVVSYGNNSTIPLLDENGIGILCLQGRLYITCADMLGTANSRIHTPMARFFRLHFRQRRVKN |
277 |
| 3 | -124.000 | 4x0y_A mol:protein length:272 Major capsid protein |
ali model follow.. |
31 | 1 | GSHMGGVEVLE-VKTGVDSITEVECFLTPEMGDPD---EHLRGFSKSISISDTESDSPNKDMLPCYSVARIPLPNLNEDLTCGNILMWEAVTLKTEVIGVTTLMNATHDNGAAKPVQGTSFHFFSVGGEALELQGVVFNYRTTYPDGTIF---PKNATVQSQVMNTEHKAYLDKNKYPVECWVPDPTRNENTRYFGTLTGGENVPPVLHITNTATTVLLDEFGVGPLCKGDNLYLSAVDVCGMSGSQQWRGLSRYFKVQLRKRRVKN |
272 |
| 4 | -124.000 | 4poq_A mol:protein length:278 VP1 |
ali model follow.. |
32 | 1 | GSHMGGVEVLE-VRTGPDAITQIEAYLNPRMGNNNPT-DELYGYSADINVASSASDNPNATTLPTYSVAVIKLPMLNEDMTCDTLLMWEAVSVKTEVMGISSLVYIYGSSSGTIPVQGTTLHMFSVGGEPLELQGLVASSTTTYPTDMVTIK---NMKPVNQALDPNAKALLDKDGYPVEVWSPDPSKNENTRYYGSFTGGATTPPVMQFTNSVTTVLLDENGVGPLCKGDKLFLSAVDIVGISESQNWRGLPRYFNVTLRKRVVKN |
275 |
| 5 | -123.000 | 3nxd_C mol:protein length:272 Major capsid protein VP1 |
ali model follow.. |
31 | 1 | GSHMGGVEVLE-VKTGVDSITEVECFLTPEMGDPD---EHLRGFSKSISISDTESDSPNRDMLPCYSVARIPLPNLNEDLTCGNILMWEAVTLKTEVIGVTSLGQATHDNGAGKPVQGTSFHFFSVGGEALELQGVLFNYRTKYPDGTI---FPKNATVQSQVMNTEHKAYLDKNKYPVECWVPDPTRNENTRYFGTLTGGENVPPVLHITNTATTVLLDEFGVGPLCKGDNLYLSAVDVCGMSGSQQWRGLSRYFKVQLRKRRVKN |
272 |
| 6 | -123.000 | 4mbx_A mol:protein length:278 Major Capsid Protein VP1 |
ali model follow.. |
34 | 1 | GSHMGGVEVLE-VRTGPDAITQIEAYLNPRMGNNIPS-EDLYGYSNSINTAFSASDTPNKDTLPCYSVAVIKLPLLNEDMTCDTILMWEAVSVKTEVVGISSLVNIYGSSSGCVPVQGTTYHMFAVGGEPLELQGLVASSTATYPDDVVAIK---NMKPGNQGLDPKAKALLDKDGYPVEVWCPDPSKNENTRYYGSFTGGATTPPVMQFTNSVTTVLLDENGVGPLCKGDKLFLSCADIAGVSETQVWRGLPRYFNVTLRKRIVKN |
275 |
| 7 | -123.000 | 4mj0_A mol:protein length:275 VP1 capsid protein |
ali model follow.. |
32 | 1 | GSHMGGVEVLE-VKTGVDAITEVECFLNPEMGDPD---ENLRGFSLKLSAENDSSDSPERKMLPCYSTARIPLPNLNEDLTCGNLLMWEAVTVQTEVIGITSMSQKVHEHGGGKPIQGSNFHFFAVGGDPLEMQGVLMNYRTKYPDGTI---TPKNPTAQSQVMNTDHKAYLDKNNYPVECWVPDPSRNENTRYFGTFTGGENVPPVLHVTNTATTVLLDEQGVGPLCKADSLYVSAADICGLSGTQQWRGLARYFKIRLRKRSVKN |
272 |
| 8 | -123.000 | 3bwq_A mol:protein length:272 Capsid protein VP1 |
ali model follow.. |
32 | 1 | GSHMGGIEVLG-VKTGVDSFTEVECFLNPQMGNPD---EHQKGLSKSLAAEKQTDDSPDKEQLPCYSVARIPLPNINEDLTCGNILMWEAVTVKTEVIGVTAMLNKTHENGAGKPIQGSNFHFFAVGGEPLELQGVLANYRTKYPAQTVT---PKNATVDSQQMNTDHKAVLDKDNYPVECWVPDPSKNENTRYFGTYTGGENVPPVLHITNTATTVLLDEQGVGPLCKADSLYVSAVDICGLSGTQQWKGLPRYFKITLRKRSVKN |
272 |
| 9 | -123.000 | 4pch_A mol:protein length:273 VP1 |
ali model follow.. |
43 | 1 | GSHMGGVEVLDTVPLTEDTQYKVEAVLLPNFGKAATT-GNFQSRGLPYTMS----DTLGPGAALCYSVAVINLPEIPDAMCEDTMIVWEAYRLETELLFAPQMASSQRANGTLAGIEGTQLYFWACGGGPLDVIGINPDPERLKVNEALEGP------GNSDVASLQALRKQVNAAFPVELWVADPTKNDNTRYFGRVVGGGVTPPVVSYGNQSTTPLIDENGVGILCTFGSVYLTSADMVGMNQRTVQAGYGRFFRVHCRQRRIKQ |
273 |
| 10 | -121.000 | 4fmg_A mol:protein length:289 VP1 |
ali model follow.. |
32 | 1 | GSHMGGVEVLSVV-TGEDSITQIELYLNPRMGVNSPDTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNEDITCDTLQMWEAISVKTEVVGISSLMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTTNGGPLGRKMTPKNQGLDPQAKAKLDKDGYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFSGKMALHGLPRYFNVTLRKRWVKN |
289 |
| 11 | -119.000 | 4pcg_A mol:protein length:276 VP1 |
ali model follow.. |
44 | 1 | GSHMGGVEVMETVPLSEDTIYKVEAILLPNFASGSNT-AVYQSRGAPYTF----TDTLDAGSSLCYTLAVVNLPEIPEALCDDTLLVWEAFRVETELIFTPQLGSYIRAQGTPAGVEGSQMYFWACGGSPLDVIGINPDPERMNVAAGLEGPSKEN---QPSVAGIKATRKQVTAAFPIEIWSADPTRNENCRYFGRIVGGSVTPPVVSFGNQSTTPLVDENGVGILCLFGAIYLTSADMLGMQQRSVQAAFGRFFRVHFRQRRVKH |
276 |
| 12 | -118.000 | 4u5z_A mol:protein length:280 Structural protein VP1 |
ali model follow.. |
28 | 1 | GSHMGNIEVLNLV-TGPDSITTIELYLNTRMGQND-ESKDNYGYSEKVTVANSDQDKPTSGEIPTYSTARINLPMLNEDLTCNTLTMWEAVSVKTEVVGVSSLVNMYDDKGIGFPVEGMNFHMFAVGGEPLELQFLTGNYRTDYSANDKLV-VPPIKHQSTQGLNPHYKQKLTKDGFPVECWCPDPSKNENTRYYGSYTGGQSTPPVLQFTNTVTTVLLDENGVGPLCKGDGLYVSCCDIVGFDGDMQYRGLPRYFNILLRKRTVRN |
280 |
| 13 | -104.000 | 3iys_A mol:protein length:343 Major capsid protein VP1 |
ali model follow.. |
31 | 22 | ....GGIEVLD-VKSGPDSITTIEAYLQPRPGQK-------NGYSTVITVQEGYQDAPHSTEVPCYSCARIPLPTINDDITCPTLLMWEAVSVKTEVVGVSSILRAFNGYGGGFTICGPRIHFFSVGGEPLDLQACMQNSKTVYPAP-LIGPGEGERRETAQVLDTGYKARLDKDGYPIECWCPDPAKNENTRYYGNLTGGPETPPVLAFTNTTTTILLDENGVGPLCKGDGLFLSAADVAGTRGRQYWRGLPRYFSIQLRKRNVRN |
288 |
| 14 | -101.000 | 1sva_1 mol:protein length:361 SIMIAN VIRUS 40 |
ali model follow.. |
31 | 30 | ....GGIEVLG-VKTGVDSFTEVECFLNPQMGNPD---EHQKGLSKSLAAEKQTDDSPDKEQLPCYSVARIPLPNINEDLTCGNILMWEAVTVKTEVIGVTAMLNKTHENGAGKPIQGSNFHFFAVGGEPLELQGVLANYRTKYPAQTVT---PKNATVDSQQMNTDHKAVLDKDNYPVECWVPDPSKNENTRYFGTYTGGENVPPVLHITNTATTVLLDEQGVGPLCKADSLYVSAVDICGLSGTQQWKGLPRYFKITLRKRSVKN |
297 |
| 15 | -100.000 | 5fua_1 mol:protein length:362 MAJOR CAPSID PROTEIN VP1 |
ali model follow.. |
31 | 31 | ....GGVEVLE-VKTGVDAITEVECFLNPEMGDPD---ENLRGFSLKLSAENDSSDSPERKMLPCYSTARIPLPNLNEDLTCGNLLMWEAVTVQTEVIGITSMSQKVHEHGGGKPIQGSNFHFFAVGGEPLEMQGVLMNYRSKYPDGTI---TPKNPTAQSQVMNTDHKAYLDKNNYPVECWVPDPSRNENARYFGTFTGGENVPPVLHVTNTATTVLLDEQGVGPLCKADSLYVSAADICGLSGTQQWRGLARYFKIRLRKRSVKN |
298 |
| 16 | -100.000 | 1sid_A mol:protein length:383 POLYOMAVIRUS COAT PROTEIN VP1 |
ali model follow.. |
31 | 32 | ....GGMEVLDLV-TGPDSVTEIEAFLNPRMGQPPTEGGQYYGWSRGINLATSTEDSPGNNTLPTWSMAKLQLPMLNEDLTCDTLQMWEAVSVKTEVVGSGSLLDTVNTKGISTPVEGSQYHVFAVGGEPLDLQGLVTDARTKYKEEGVVTIKKKDMVNKDQVLNPISKAKLDKDGYPVEIWHPDPAKNENTRYFGNYTGGTTTPPVLQFTNTLTTVLLDENGVGPLCKGEGLYLSCVDIMGWYDVHHWRGLPRYFKITLRKRWVKN |
317 |
