FFAS03 results for 3g67A

Query: 3g67_A mol:protein length:213 Methyl-accepting chemotaxis protein, from PDB0516

Results of FFAS03 search in PDB0516
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210`
#	Score	Template	Links and tools	%id	First	`RIEEVKERFVNLNRLFQELVGDFQAKSDQLVSVIQDMEKISENIMEELKKSGTNVDQIVERVKEASSQIGETLENIRSIEKLIQNIMRIARETNILALNATIEAARAGEAGKGFMIVANEVQNLSNETNEVTKQIVEKAREILESSQRSLENLEFMANLFETVGKTLQNMVRFMENNVKLLQEVRNSLDTSKESLSEKSAEIDSATKVLEETA`	Last
1	-75.600	`3g67_A mol:protein length:213 Methyl-accepting chemotaxis protein`	`ali model`	100	1	`RIEEVKERFVNLNRLFQELVGDFQAKSDQLVSVIQDMEKISENIMEELKKSGTNVDQIVERVKEASSQIGETLENIRSIEKLIQNIMRIARETNILALNATIEAARAGEAGKGFMIVANEVQNLSNETNEVTKQIVEKAREILESSQRSLENLEFMANLFETVGKTLQNMVRFMENNVKLLQEVRNSLDTSKESLSEKSAEIDSATKVLEETA`	213
2	-47.600	`2ch7_A mol:protein length:309 METHYL-ACCEPTING CHEMOTAXIS PROTEIN`	`ali model follow..`	22	41	`NISTRIESISASVQETTAGSEEISSATKNIADSAQQAASFADQSTQLAKEAGDALKKVIEVAKDVERVVESFQKGAEEITSFVETINAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEIRKLAEESQQASENVRRVVNEIRSIAEDAGKVSSEITKLADEADEKLNSIVGAVERINEMLQNIAAAIEEQTAAVDEITTAMTENAKNAEEIT`	267
3	-47.000	`4jpb_B mol:protein length:90 Methyl-accepting chemotaxis protein`	`ali model follow..`	96	2	`...............................................................SHMSQIGETLENIRSIEKLIQNIMRIARETNILALNATIEAARAGEAGKGFMIVANEVQNLSNETNEVTKQIVEKAREILESSQRSLEN.............................................................`	90
4	-38.000	`3zx6_A mol:protein length:341 HAMP, METHYL-ACCEPTING CHEMOTAXIS PROTEIN I`	`ali model follow..`	22	56	`DVRNGANAIYSGASEIATGNNDLSSRTEQQAASLEETAASMEQLTATVKQNAENARQASHLALSASETMRDISTSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAREIKSLI-------EDSVGKVDVGSTLVESAGETMAEIVSAVTRVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQNA`	275
5	-23.600	`4wjg_E mol:protein length:343 Haptoglobin-hemoglobin receptor`	`ali model follow..`	11	78	`ANDTKAVKIIENITSARENLALFNNETQAVLTARDHVHKHRAAALQGWSDAKEKGDAAAEDVWEKCSRYSSSSTSETELQKAIDAAANVGGLNKFKLSNASVGAVRGGKHMEKVNNVAKLLKDAEVSLAAAAAEIEEVKNAHETKAQEEMKR-SETNSGGNAESQGNGDREDKNDEQQQVDEEETKVENGSSEEGSCCGNESNGPHVMKKRHG`	332
6	-20.400	`5cws_D mol:protein length:227 Nucleoporin NUP49`	`ali model follow..`	9	18	`KCIRDKEAVDAFLPAHGEQLAAIPTDVNFVTRKSEGAHNALSSDILAIDQLRELVKQDADNARLSFKAIDNLKLPMQYHQALWSKQMGGAGTAGASGASADADGQSNADLISYFSKTADEMEEMMKKFEKTITEIEAHLTGVEAHAMAMQNVAQSRNAAQGGVDERVYELAAVLREFEESILKVAGVVGGVKEGVTELQLR............`	220
7	-15.100	`5cwb_A mol:protein length:211 Designed helical repeat protein`	`ali model follow..`	12	4	`.....EDECEEKARRVAEKVERLKRSGTSEDEIAEEVAREISEVIRTLKESGSSYEVICECVARIVAEIEALKRSGTSEDEIAEIVARVISEVIRTLKESGSSYEVICEC---VARIVAEIVEALKRSGTSEDEIAEIVARVISEVIRTLKSYEVIKECVQRIVEEIVEALKRSGTSEDEINEIVRRVKSEVERTLKESGS............`	201
8	-13.500	`4f7g_B mol:protein length:216 Talin-1`	`ali model follow..`	7	23	`ECETAIAALNSCLRDLDQASLAAVSQQISQEALHTQMLTAVQEISHLIEPLASAARAEASQLGHKVSQMAQFEPLTLAAVGAASKTLSHPQQMALLSALQLLYTAKAGGNPKQAAHTQEALEEAVQMMTEAVEDLTTTLNEAASAAGVVGGMVDSITQAINQLDE................................................`	203
9	-12.200	`3dyj_A mol:protein length:332 TALIN-1`	`ali model follow..`	4	118	`VLINAVKDVAKALGDLISATKAAAGKVGD-DPAVWQLKNSAKVMVTNVTSLLKTVKAVEDEATKG---TRALEATTEHIRQELAVFCSPEPPAKTSTPEDFIRMTKGITMATAKAVAAEDVIATANLSRRAIADMLRACKEAAFHPEVAPDVRLRALHYGRECANGYLELLDHVLL--TLQKPNPDLKQQLTGHSKRVAGSVTELIQAAEAMK`	330
10	-11.500	`4k1p_A mol:protein length:360 NheA`	`ali model follow..`	12	119	`AYGKLQLQVQSIQENMEQDLLELNRFKTVLDKDSNNLSIKADEAIKTLQGSSGDIVKLREDIKRIQGEIQAELTTILNIKGSINIGKQVFTITNQTAQTKTIDFVSIGTLSNEIVNAAKELLPLIQKLSQTEAEATDQVSSFTELIDRQITTLETLLTDWKVLNNNMIQIQKNVEETYTDSSLLQKHFNQIKKVSDEMNKQTNQFEDYVTNV.`	357
11	-10.100	`3vf0_A mol:protein length:283 Vinculin`	`ali model follow..`	12	109	`..QPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVANLLQVCERIPTISTQLKILSTVKATMLGRTNI------------DEESEQATEMLVHNAQNLMQSVKETVREAEAAS........................................................`	262
12	-10.100	`2nrj_A mol:protein length:346 Hbl B protein`	`ali model follow..`	11	115	`.....TGDGETLKEGITDLRGEIQQNQKYAQQLIEELTKLRDSIGHDVRAFGSNKELLQSILKNQGADVDADQKRLEEVLGSVNYYKQLESDGFNVMKGAIL-GIIVGVARDNLGKLEPLLAELRQTVDYVVGVAYSNINEMHKALDDAINALTYMSTQWHDLDSQYSGVLGHIENAAQKADQLKPNLNAAKDSWKTLRTDAVTLKEGIKEL.`	337
13	-9.720	`4yxx_A mol:protein length:220 dTor_6x35L`	`ali model follow..`	13	4	`......EQALKILKVAAELGTTVEEAVKRALKLKTKLGVSLEQALKILEVAAELGTTVEEAVKRALKLKTKLGVSLEQALKILEVAAKLGTTVE--AVKRALKLTKLGVSLEQALKILKVAAELGTTVEEAVKRALKLKTKLGVSLEQALKILEVAAELGTTVEEAVKRALKLKTKLGVSLEQALKILEVAAKLGTTVEEAVKRALKLKTKLG`	210
14	-9.550	`3jbi_V mol:protein length:254 Vinculin`	`ali model follow..`	12	85	`..QPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDEVTRLAKEVANLLQVCERIPTISTQLKILSTVKATMLGRTN-----------ISDEESEQATEMLVHNAQNLMQSVKETVREAEAAS........................................................`	238
15	-9.210	`4e40_A mol:protein length:252 Putative uncharacterized protein`	`ali model follow..`	12	20	`ELRAQLAGVSIASGILLRPAVIRNATTEFSRKKSEDILAKGGAAVERASAAVDRVSGLDKTNETAQKVRKAAAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANGDASAVKVSNLLARAKESENQYVKEAAEECSESTNYDVTAKSLAAALDKLPGVDNAVKTTFQSILTSLDNLDKDVKSVEQRAEELETALEKAERQLEKA.`	233

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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