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Query: sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 1641-1750), from NEW_HUMAN_DOMAINS

Results of FFAS03 search in PDB0516
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110
# Score Template Links and tools%idFirst AKRKGLPPPLFSPEEDAVFYNGKKFKLQSFEPKTPTVHGLGPKKERLALYLLHTQGLVPEHVETRTLYSHSQPGIDQGKVQMWVDIFPKKLGPPGPQVNINPRKPKRKASLast
1 -9.2203c0u_A mol:protein length:183 Uncharacterized protein yaeQ  ali model follow..  15  1.QGHALKATIYKATVNVADLDRNQFL----DASLTLARHPSETQERMMLRLLAWLKYADERLQTRGLCADDEPEAWLLGIDLWIEL........................ 86
2 -8.9702g3w_A mol:protein length:182 hypothetical protein XAC2396  ali model follow..  17  2....ALTATVRRAELQISDMDRGYYA----NHSLTLAQHPSETDERLMVRLLAFALFADDRLEGRGLSNDDEPDLWRGDPDLWIDL........................ 84
3 -8.9402ot9_A mol:protein length:180 Hypothetical protein  ali model follow..  15  2....AQPSTTYKFELNLTDLDRGVYE----SVKQTIARHPSETEERMTVRLLAYAFWYNEQLAGRGLSDVDEPALWEDRVLHWIEV........................ 84
4 -8.1001whn_A mol:protein length:128 hypothetical protein RIKEN cDNA 2310016K04  ali model follow..  16  36CRREKLPQPVYETVQRVVTVAEQKYQSTLWDKSK------KLAEQTAAIVCLRSQGLPEGRLGEES............................................ 103
5 -7.3504wft_C mol:protein length:120 tRNA-dihydrouridine(20) synthase [NAD(P)+]-li  ali model follow..  15  42CRREKLAQPVYETVQRIVTVAEQKYQSTLWDKSK------KLAEQAAAIVCLRSQGLPEGRLGEES............................................ 109
6 -7.0201bxt_A mol:protein length:234 PROTEIN (STREPTOCOCCAL SUPERANTIGEN)  ali model follow..  14  147..........................................NKKQVTVQEL-DCKTRKILVSRKNLYEFNNSPYETGYIKFWYDMMPAPGAIFDQSKYLMLYNDNKTVS 221
7 -6.9903bbd_A mol:protein length:205 Ribosome biogenesis protein NEP1-like  ali model follow..  12  2................TYNIILAKSALELIPEEIKNKIRKSRVYKYDILDSNYHYKAMPDIIHISLLNILDSPINHEKKLNIYIHTYDDKVLKINPETRL-PRNYFRFLG 105
8 -6.9901uky_A mol:protein length:203 URIDYLATE KINASE  ali model follow..  17  51.................................RAEQGRAGSQYGELIKNCIKEGQIVPQEITLALLRNAISDNVKANKHKFLIDGFPRKM................... 108
9 -6.8304m1v_A mol:protein length:378 Phosphate-binding protein  ali model follow..  14  50...........TDTTKNVHWAGSDSKLTATELSTYASDKEPTWGKLIQVPSVATSVAIPAGTNAVDLSVKELCGVFSGRITDWSGI---TGSGRSGPIQVVYRSESS... 145
10 -6.6902ipk_D mol:protein length:240 Enterotoxin type C-3  ali model follow..  11  151..........................................DKKSVTAQEL-DIKARNFLINKKNLYEFNSSPYETGYIKFWYDMMPAPGDKFDQSKYLMMYNDNKTVD 225

FFAS is supported by the NIH grant R01-GM087218-01
8 2 9 1 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Friedberg I, Jaroszewski L, Ye Y, Godzik A. The interplay of fold recognition and experimental structure determination in structural genomics. Curr Opin Struct Biol. 2004 Jun;14(3):307-12.