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Query: gi|15675963|ref|NP_273081.1| 6-phosphogluconate dehydrogenase (NMB0015) [Neisseria meningitidis MC58], from N.meningitidis

Results of FFAS03 search in PfamA30U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNGDIGVIGLAVMGQNLILNMNDCGFKVVAYNRTTAKVDEFLNGAAKGTNIIGAYSLQDLVDKLEKPRKIMMMVRAGSVVDEFIEQLLPLLEEGDILIDGGNANYPDTTRRTHYLAEKGILFVGAGVSGGEEGARRGPSIMPGGDKRAWDAVKPIFQAIAAKTSQGEPCCDWVGKDGAGHFVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMYRVFAEWNKTELDSYLIEITAAILGYKDEGGEPLVEKILDTAGQKGTGKWTGINALDLGIPLTLISEAVFARCVSSFKEQRVQTGKLFARTVTPVEGGKQEWVEALRQALLASKIISYAQGFMLIREAGESYGWDLDYGNTALLWREGCIIRSAFLSNIRDAYENNPDLVFLGADPYFKNILENCLPAWRKVVAKAVECGIPMPCMASAITFLDGYTTERLPANLLQAQRDYFGAHTYERTDKPRGEFFHTNWTGKGGDTASTTYDILast
1 -103.000PF00393.17; K8GH81_9CYAN/178-467; 6-phosphogluconate dehydrogenase, C-terminal domain  ali follow..  51  1..................................................................................................................................................................................GHYVKMVHNGIEYGDMQLIAEAYDLMKNVAGLNTAQLHEVFSEWNKDELDSYLIEITADIFKVADETGSPLVDLILDAAGQKGTGRWTVDTALEIGVPIPTIIAAVTARIMSSYKQERVEASKQLSGPSIAFDADVKEFVDKVRDALYCSKMCSYAQGMALLKKASEVYSFGLNLGECARIWKGGCIIRARFLNKIKKAFDENPNLPNLLLAPEFKQSILDRQSAWREVIATAAKVGIPVPAFSASLDYFDSYRRARLPQNLTQAQRDYFGAHTYERVDKE--GIFHTDW.............. 290
2 -71.500PF03446.13; Q8FTI1_COREF/15-184; NAD binding domain of 6-phosphogluconate dehydrogenase  ali follow..  51  1...QIGVVGLAVMGSNLARNFARNGHTVAVYNRSTDKTDKLISDYATDGNFIPTKTVEDFVAALEKPRRAIVMVQAGAATDAVINQLADAMEEGDIIIDGGNALYTDTVCREKEMAARGRHFVGAGISGGEEGALNGPSIMPGGPKESWEALGPLLESIAAKV-DGVPCVTHIG.................................................................................................................................................................................................................................................................................................................... 170
3 -9.930PF01210.21; GPDA_COXBU/7-162; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus  ali follow..  20  1...PIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYKAYCDLKASLEGVTDILIVVPS-FAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATE----VISGPSLATEVAANLPTAVSLASNNS.............................................................................................................................................................................................................................................................................................................................................. 153
4 -8.560PF02558.14; Q9K9R6_BACHD/6-154; Ketopantoate reductase PanE/ApbA  ali follow..  14  1....VAVIGSGSIGLLLYAYLKLANWPALLVTNRPEQADHLFVAKSGEHQPISVTATPLSSFSAEEAEVGFITVKSFA-VKALLPQLQRKKWDGLVFFQNGMTHLEILRQIPARAICCGIVEIGAKRESDVRVQHTGDGAIWIGDMVG.............................................................................................................................................................................................................................................................................................................................................. 149
5 -6.360PF02254.16; Q92CZ9_LISMO/5-120; TrkA-N domain  ali follow..  22  1....FAVIGLGRFGGSICRSLVEQGMEVLAIDSDEERVNEYMSIATHA--VIANSTDENALRQLGIRNFEHVIVAIGEDIQSSILTTLILKEMGVKYV---------TAKATNDKHAKLLDKIGA..................................................................................................................................................................................................................................................................................................................................................................... 110
6 -5.740PF14833.4; Q67QX0_SYMTH/163-284; NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase  ali follow..  15  1................................................................................................................................................................................GAGSVAKLCNNLLVGIHTAAMAEAFVLGTK-AGVDPKALYEIISN-ATGHSAQIARNIPQFVFPGKFDAAFSIDHLHKDVALAVELGK-----DENVRMVLGAVTQQLLAEARAL............................................................................................................................................................................................... 108
7 -5.600PF15062.4; Q290N9_DROPS/100-185; Haemopoietic lineage transmembrane helix  ali follow..  14  12.........................................................................................................................................................................................................................................................................................................................................................................................................SEALGWSERHQLVSKLSPLLCGLIVATFAYGMVYLDSAVPGVTPPS--------FSPRSKQRFRQQKSASLHLGYL............. 80
8 -5.500PF02826.17; Q98GE4_RHILO/107-283; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain  ali follow..  18  39..KTIGIVGLGAVGQAVGIAAHGFDLKVVATTRSMQPAPEKVG-------------FLSIDALVEQSDIIVLCCPLTPETRGLISR-IARMKPNALLINVSRGPVVDDDALIEALREGRIGGAALDVFSTQPLSYNHPYF...................................................................................................................................................................................................................................................................................................................................................... 165
9 -5.480PF08965.8; X2GUQ4_9GAMM/1-117; Domain of unknown function (DUF1870 topsan)  ali follow..  12  1...................................................................................................................................................................................................MTNLELQAYRRFLMLKVSEASETWHNWEKGTVPQYVVTAMQELKKLRTDKVNIIINSINDRVGSSTIRYFLTYEEFKKVNPELDIIQWRLHQSIATELYFRGLEK...................................................................................................................................................................................... 115
10 -5.390PF08723.8; Q9QGK7_9RETR/2-124; Gag protein p15  ali follow..  13  1...............................................................................................................................................................................................GDPLTWSKALKKLEKVTVQGSQKLTTGNCNWALSLVDLF----DTNFVKEKDWQLRDVIPLLEDVT-QTLSGQWWAISAVKMGLQINNVVDGKASFQLLRAKYEKKTANKKQSEPSEEY............................................................................................................................................................................ 123

FFAS is supported by the NIH grant R01-GM087218-01
8 5 6 4 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.