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Query: gi|13507741|ref|NP_109690.1| DnaJ domain-containing protein MPN002 [Mycoplasma pneumoniae M129], from M.pneumoniae

Results of FFAS03 search in PfamA30U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTLYDLLELPQTATLQEIKTAYKRLAKRYHPDINKQGADTFVKINNAYAVLSDTTQKAEYDAMLRFSEFEDRVKRLDFSIKWHEQFMEELQFHHNWDFDFIRNREYTQPTPTNNKYSSFLDKDVSLAFYQLYSKGKLDFDLEDTLLRRHSIKQAFLKGKKLNDVLKEQYNYLGWLEAKRYFNIDVEIELTPKEVREGGVVNLPLKIKVISNNYPGQMWYELNKNYSFRLLWDIKNGEVAEFFGKGNRALGWRGDLIVRMRIVDKIKKRLRIFSSHFEQDKTKLWFLVPQDKQDNPNKWVFDYKTHEFIVLast
1 -48.200PF01556.16; T0NBZ6_9EURY/129-343; DnaJ C terminal domain  ali follow..  12  1.......................................................................................................................LLTNLRISLEDAYYGAKKTIKYRRNAECQTCHGTGSKDGK-LVTCKDCNGTGQQRVVQGQGFFRMVTVTTCKTCGGRGKVPSVV------CPDCHGTGSVPVTENLEITVPKGAPDRLRLRIKGKGQSHFGRTGDLYVVLNVEET---------PGMKRINDDIYIVEEIGFPEAALGVEKEIKLFRETL 174
2 -33.000PF00226.29; Q22028_CAEEL/17-79; DnaJ domain  ali follow..  43  1.DFYQLLGVEKMASEAEIKSAYRKLALKYHPDRNAHAQEEFKKVSIAYSVLSDPNKRRQYD........................................................................................................................................................................................................................................................ 63
3 -18.000PF14687.4; M4AL98_XIPMA/24-133; Domain of unknown function (DUF4460 topsan)  ali follow..  15  2.........QRALSAAEAVNALRPFYFAVHPDFREVNENSLKQLNGYMENLQKPDLKLVRPI....................................................................................................................................................................................................................................................... 61
4 -11.600PF00684.17; DNAJ_CLOPH/149-213; DnaJ central domain  ali follow..  1..................................................................................................................................................CETCHGSGAKPGSSAETCHKCNGKGQVTFTQQSLFGMVRNVQTCPDCRGTGKIIKEK------CPDCYGSG............................................................................................ 65
5 -11.100PF03656.11; TIM16_CAEEL/1-135; Pam16  ali follow..  12  66.ESLQILNVKTPLNREEVEKHYEHLFNINDKSKGGT-----SKVFRAKERIDEEFGRIE.......................................................................................................................................................................................................................................................... 122
6 -8.410PF03343.11; L8FTP1_PSED2/4-620; SART-1 family  ali follow..  20  574LKYTDEFG--RNMNQ---KEAFKHLSHQFHSGKQK-TEKLLKKIED....................................................................................................................................................................................................................................................................... 616
7 -8.380PF03105.17; F6HV90_VITVI/1-342; SPX domain  ali follow..  23  290.............VEQKLKKAYHKLCLKSYSFLNSLA---FSKIMKKYDKIASRNASKSY......................................................................................................................................................................................................................................................... 338
8 -8.250PF11833.6; K9UNI5_9CHRO/14-205; Protein CHAPERONE-LIKE PROTEIN OF POR1-like  ali follow..  22  1..........EDATFEEIQAAKQRVIAQLGGD-----RQLQDNIEAAYDILMERLKLRQQGKI...................................................................................................................................................................................................................................................... 49
9 -7.150PF15293.4; U3JUT3_FICAL/52-645; Nuclear fragile X mental retardation-interacting protein 2  ali follow..  16  552.......GLERKDS--DLRAAI------YH-----------KEMEAVWNL-QDPKRIITYDE....................................................................................................................................................................................................................................................... 594
10 -6.180PF11126.6; Q6WIE9_BPKVM/22-88; Transcriptional regulator DsbA  ali follow..  23  14..ERDLIKDIANRAKEEFPADFNKVVKMYHKQNRQEEQAKYEKIDNLYEKLFD................................................................................................................................................................................................................................................................ 67

FFAS is supported by the NIH grant R01-GM087218-01
8 5 6 5 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Slabinski L, Jaroszewski L, Rychlewski L, Wilson IA, Lesley SA, Godzik A. XtalPred: a web server for prediction of protein crystallizability. Bioinformatics. 2007 Dec 15;23(24):3403-5. Epub 2007 Oct 5.