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Query: sp|P61221|ABCE1_HUMAN ATP-binding cassette sub-family E member 1 OS=Homo sapiens GN=ABCE1 PE=1 SV=1, from H.sapiens

Results of FFAS03 search in SCOP206
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGICIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTALKILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAAKGTVGSILDRKDETKTQAIVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMFDEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVTMPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGMKKKMGEFELAIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKISPKSTGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKPADVYLIDEPSAYLDSEQRLMAARVVKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGVPSKNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDDLast
1 -44.400d2nq2c_ c.37.1.0 (C:) automated matches {Haemophilus influenzae [TaxId: 727]}  ali model 3D-neighbors follow..  18  1......................................................................................................................................................................................................................................................................................................................................................NKALSVENLGFYYQAENFLFQQLNFDLNKGDILAVLGQNGCGKSTLLDLLLGIHRPIQGKIEVYQSIGFVPQFFSSPFAYSVLDIVLMGRSTHINT-QVAMQALDYLNLTHLAKREFTSLSGGQRQLILIARAIASECKLILLDEPTSALDLANQDIVLSLLIDLAQSQNMTVVFTTHQPNQVVAIANKTLLLNKQNFKFGETRNILTSENLTALFHLPMFE................................... 230
2 -40.200d3gfoa_ c.37.1.0 (A:) automated matches {Clostridium perfringens [TaxId: 195103]}  ali model 3D-neighbors follow..  22  2......................................................................................................................................................................................................................................................................................................................................................DYILKVEELNYNYSDGTHALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDNGIMKLRESIGIVFQDPDNQLFSASVYQDVSFGKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVMKEGRVI.......................................................... 220
3 -40.000d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  17  6................................................................................KDLRKRIGKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGK------VEEPHEVRKLISYLPEEAG------RNMQGIEYLRFVAGFYASSSSEIEEMVERATEIAGLGEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHNMLEVEFLCDRIALIH-----NGTIVETGTVEELKERYKAQNIEEVFEEVVK................................................................................................................................................................................................................................................................................. 238
4 -39.500d1sgwa1 c.37.1.12 (A:2-200) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}  ali model 3D-neighbors follow..  16  1..........................................................................................................................................................................................................................................................................................................................................................KLEIRDLSVGYDKPVLERITMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGKIFFLPEEIIVPRKISVEDYAVASLYGVKVNKNEIMDALESVEVLDLKKK-LGELSQGTIRRVQLASTLLVNAEIYVLDDPVVAIDEDSKHKVLKSILEILKEKGIVIISSRE----ELSYCDVNENLHKYS............................................................ 198
5 -37.700d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}  ali model 3D-neighbors follow..  24  1..........................................................................................................................................................................................................................................................................................................................................................MFLKVRAEKRLGNFRLNVD-----GRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGALPPERRGIGFVPQDYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAMLADEVAVMLNGRIVE--KGKLKELFSAKNGEVAEF..................................... 225
6 -37.700d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}  ali model 3D-neighbors follow..  17  1..........................................................................MVRIIVKNVSKVFKKGKVLDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQT----WALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRGVTLLVVSHDPADIFAIADRVGVLVK-----GKLVQVGKPEDLYDNPVSIQVAS........................................................................................................................................................................................................................................................................................ 239
7 -37.200d2pcja_ c.37.1.0 (A:) automated matches {Aquifex aeolicus [TaxId: 224324]}  ali model 3D-neighbors follow..  20  7................................................................................ENIKKVIRGYEILKGISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEG---KEVDYTNEKELSLLRNRKLGFVFQFHYLIPELTALENVIVPMLKMGKPKKEAKERGEYLLSELGLGDKLSRKPYELSGGEQQRVAIARALANEPILLFADEPTGNLDSANTKRVMDIFLKINEGGTSIVMVTHERE-LAELTHRTLEMKD-----GKVVGE......................................................................................................................................................................................................................................................................................................... 219
8 -37.100d1b0ua1 c.37.1.12 (A:5-258) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}  ali model 3D-neighbors follow..  17  6................................................................................IDLHKRYGGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQ--KVADKNQLRLLRTRLTMVFQH--NLWSHMTVLENVMEAPIQVLG--LSKHDARERALKYLAKVGIDERAQGKPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQ-----GKIEEEGDPEQVFGNPQSPRLQQ........................................................................................................................................................................................................................................................................................ 247
9 -36.100d1g6ha_ c.37.1.12 (A:) MJ1267 {Methanococcus jannaschii [TaxId: 2190]}  ali model 3D-neighbors follow..  14  1.........................................................................TMEILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYG--IVRTFQTP-QPLKEMTVLENLLIGEICPGESPLKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMNGQIIAEGRGEEEIKNVLSDPKVVEIYIGE........................................................................................................................................................................................................................................................................................ 254
10 -35.600d2qi9c_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  23  10.......................................................................................AESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMT-SGKGSIQFAG---QPLEAWSATKLALHRAYLSQQQTPPF---------ATPVWHYLTLHQHDKTRTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQAGQLLLLDEPMNSLDVAQQSALDKILSALSQQGLAIVMSSHDLNHTLRHAHRAWLLKGKMLASGRREEVLTPPNLAQAY............................................................................................................................................................................................................................................................................................... 229
11 -35.500d4p32a_ c.37.1.0 (A:) automated matches {Escherichia coli K-12 [TaxId: 83333]}  ali model 3D-neighbors follow..  16  6................................................................................KNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIID---DDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQ--IRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVQGHLIAHGTPTEILQDEHVKRVYL.............................................................................................................................................................................................................................................................................................. 234
12 -35.300d3tuic1 c.37.1.12 (C:1-240) automated matches {Escherichia coli K-12 [TaxId: 83333]}  ali model 3D-neighbors follow..  21  20........................................................................................................................................................................................................................................................................................................................................................................ALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGELTKARRQIGMIFQH--NLLSSRTVFGNVALPRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIE......................................................... 221
13 -35.300d4rvca_ c.37.1.0 (A:) automated matches {Geobacillus kaustophilus [TaxId: 1337888]}  ali model 3D-neighbors follow..  17  6................................................................................KDLSGGYTAQNVLEDVTFVVDRGEMVALIGLNGAGKSTTIKHIIGLMEPRRGAISING----YRLADGPETYRRQFAYIPETPVEELTLEEHLRLAAMAY------GLSEAEYERRLPPLLREFRLERRLSSFPAHFSKGMKQKVMIVCAFLLEPPLYIIDEPFLGLDPLAIHALLERMNEQKAKGAGILLSTHILATAERYCDSFVILHGRVKAKGTLDDIRRQFGLRGASLDE............................................................................................................................................................................................................................................................................................ 233
14 -33.700d2ff7a2 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  22  5................................................................................RNIRFRYKPDSILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDG---HDLALADPNWLRRQVGVVLQDNV--LLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICK-GRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELLSEPESL.................................................................................................................................................................................................................................................................................................. 231
15 -31.900d4hzia_ c.37.1.0 (A:) automated matches {Leptospira interrogans [TaxId: 267671]}  ali model 3D-neighbors follow..  17  7................................................................................EKISYKPTGKTILDSVSFEIKTNEHCVLLGRNGAGKSTLVNLIYGMIWATSGTIRL---FQETYGEIAIQDLRKRIGILDSSQQENSIKLTVKDTILTGLFHTIGY--PSPEEETKTLQILKDSDLLSKKDQLYNTLSSGEKKKILFLRSIVNEPDFLIMDEPCSSLDLTAREDFLGFLKEYHSKKFTSLYITHRPEEIPDFYSKAVLLEGKVIHFGPIEECFTEKNLEDLY............................................................................................................................................................................................................................................................................................... 240
16 -31.900d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}  ali model 3D-neighbors follow..  19  1........................................................................................................................................................................................................................................................................................................................................................MLSARHVDFAYDDSEQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDGSLENWRSQIGFVSQDSA--IMAGTIRENLTYGLEGDYTDEDLQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDEATASLDSESESMVQKALDSLMK--GRTTLVIAHRLSTIVD-ADKIYFIEKGQITGSGKHNELVATHPLYAKYVSEQLT.................................. 240
17 -31.600d2ixea_ c.37.1.12 (A:) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}  ali model 3D-neighbors follow..  17  30.........................................................................................................................................................................................................................................................................................................................................................................LQGLTFTLYPGKVTALVGPNGSGKSTVAALLQNLYQPTGGKVLLDGDHHYLHTQVAAVGQEPL--LFGRSFRENIAYGLTRTPTMEEIGYDTEVGETGNQLSGGQRQAVALARALIRKPRLLILDNATSALDAGNQLRVQRLLYESPEWASRTVLLITQQLSLAER-AHHILFLKEGSVCEQGTHLQLMERGGCYRSM........................................ 248
18 -30.900d2ihya1 c.37.1.0 (A:1-259) automated matches {Staphylococcus aureus [TaxId: 1280]}  ali model 3D-neighbors follow..  17  6................................................................................DQIGRMKQGKTILKKISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTVNLFGK-----VGYSAETVRQHIGFVSHSLLEKF-GERVIDVVISGAFKSIGVYQDDDEIRNEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARESLLSILDSLSDSTLAMIYVTHFIEEITANFSKILLLDGQSIQQGAVEDILTSENMSRFF............................................................................................................................................................................................................................................................................................... 241
19 -29.000d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}  ali model 3D-neighbors follow..  17  10................................................................................QSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNG---QDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRK----DKEGIKRDLEWIFSLFRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALGALKVAHYGYVLE-----TGQIVLEGKASELLD................................................................................................................................................................................................................................................................................................. 228
20 -28.600d2pzea1 c.37.1.12 (A:387-645) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  21  2.....................................................................................................................................................................................................................................................................................................................................................TTTEVVMENVTAFWEEGTPVLKDINFKIERGQLLAVAGSTGAGKTSLLMMIMGELEPSEGKIKHSGRISFCSQFSWIMPGTIKENIIFGVSYDEYRYRSVIKACQLEEDISKFLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVLTEKEIESCVCKLMAN--KTRILVTSKMEHLKK-ADKILILHEGSSYFY---TFSELQNLQPDFSSKL..................................... 226
21 -28.400d2cbza1 c.37.1.0 (A:642-871) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  22  17......................................................................................................................................................................................................................................................................................................................................................................PPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVAIKGSVAYVPQQAWIQNDSLRENILFGCQLEEPYYRSVIQACALLPDLEILIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIENVIGPKGMLKNKTRILVTHSMSYLPQ-VDVIIVMSGGKISE--MGSYQELLARDGAFAE....................................... 223
22 -27.200d4q7ka_ c.37.1.0 (A:) automated matches {Thermotoga maritima [TaxId: 243274]}  ali model 3D-neighbors follow..  15  1................................................................................................NFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDE---LDVRTVKLKDLRGHISAVPQE--TVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLGYDSRVERGGRNFSGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALL--ADKILVLHE-----GKVAGFGTHKELLE................................................................................................................................................................................................................................................................................................. 204
23 -25.600d2d2ea_ c.37.1.0 (A:) automated matches {Thermus thermophilus HB8 [TaxId: 300852]}  ali model 3D-neighbors follow..  19  6................................................................................RDLWASIDGETILKGVNLVVPKGEVHALMGPNGAGKSTLGKILAGDPEYTVERGEILLDGENILELSPDERARKGLFLAFQYPV-EVPGVTIANFLRLALQAKLGREVGVAEFWTKVKKALELLDWDSYLSRYLNEFSGGEKKRNEILQLLVLEPTYAVLDETDSGLDIDALKVVARGVNAMRGPNFGALVITHYQRILNYIQDKVHVMMD-----GRVVATGGPELALELEAKGY........................................................................................................................................................................................................................................................................................... 238
24 -22.800g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Pyrococcus furiosus [TaxId: 2261]}  ali 3D-neighbors follow..  16  3..................................................................LERVTVKNFRSHSDTVVEFKEG----------------INLIIGQNGSGKSSLLDAIDTYIDLIFEKDGTKYRITRRFLKGYSSGEIHAMKRLVGNEWKHVTEPSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFVVWEGKERPLTFLSGGERIRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEELKD-AADHVIRISLENGSSK.............................................................................................................................................................................................................................................................................................................. 288
25 -14.800d1jb0c_ d.58.1.2 (C:) Photosystem I iron-sulfur protein PsaC {Synechococcus elongatus [TaxId: 32046]}  ali model 3D-neighbors follow..  21  2.......HTVKIYDTCIG--CTQ-CVRACPTDVLEMVWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGAETTR..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 74
26 -11.700d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  12  3..................................................................LVGLELSNFKSYRGVTKVGFGESN--------------FTSIIGPNGSGKSNMMDAISFVL-------------GVRSNHLRSNILKDLIYRGVLNDENSDDYDNEGAASSNPQSAYVKAFYQKGNKLVELMRIISRNGDTSYKIDGKTVSYKDYSIFLENENILIKAKNFLVFQGDVEQIAAQSPVELSRMFEEVSGSIQYK------------------------------KEYEELKEKIEKLSKSATESIKNRRRIHGELKTYKSPGLEVLFQGPRGSRYDEAEGRFEVINNETEQLKAEEKKILNQFLK----KKKRKELFEKTFDYVSDHLDAIYRELTKNPNSNVELAGGNASLTIEDEDEPFNAGIKYHATPPLKRF-----KDMEYLSGGEKTVAALALLFAQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKNTMF--EKSDALV.................................................................. 406
27 -11.300d1hfel2 d.58.1.5 (L:2-86) Fe-only hydrogenase larger subunit, N-domain {Desulfovibrio desulfuricans [TaxId: 876]}  ali model 3D-neighbors follow..  24  27........VQIDEAKCIG----DTCSQYCPTA-----AIFGEMGEPHSIPHIEACINCGQCLTHCPENAIYEAQ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 84
28 -11.200d1xera_ d.58.1.3 (A:) Ferredoxin {Sulfolobus sp. [TaxId: 2288]}  ali model 3D-neighbors follow..  24  30VLGIHGTIVGVDFDLC----ADGSCINACPVNVFQWYDTPGHPASEKKAVNEQACIFCMACVNVCPVAAIDVKP............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 102
29 -10.800d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  25...............................................................................................................................................................................................................................................................................................................................................................................NMVAGTVGALVSPGGAGKSMLALQLA--AQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHRHALGAHLSAEERQAVADGLLIQPLIGSLPNIMAPEWFDGLK---RAAEGRRLMVLDTIEEENASGPMAQVIGRMEAIAADTGCSIVFLHHKGAAMMGAGDQQQASRGSSVLVDNIRWQSYLSSMTSAEAEEWGVDDDQRRFFVRFGVSKANYGAPFADR.......... 249
30 -10.600d3kb2a1 c.37.1.1 (A:2-165) automated matches {Bacillus subtilis [TaxId: 1423]}  ali model 3D-neighbors follow..  1....................................................................................................................................................................................................................................................................................................................................................................................TLIILEGPDCCFKSTVAAKLSKYPIIKGSSFELAKSGNEKLFEHFNKLADEDNVIIDRFVYSNLVYAKKFKDY------SILTERQLRFIEDKIKAKAKVVYLHADPSVIKLRVRGDEYIEGKDIDSILELYREVMSNAGLHTYSWDTGQWSSDEIAKDII.................................................................. 160
31 -10.400d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}  ali model 3D-neighbors follow..  14  3.......................................................................................................KLYIITGPAGVGKSTTCKRLAAQLDNSAYGGYRPPWESDELLALTWKNITDLTVNFLLAQNDVVLDYIAFPDEAEALAQTVQAKVDDVEIRFIILWTNREELLRRDALRKKDEQMGERCLELVEEFESKGIDERYFYN--TSHLQPTN---LNDIVKNLKTNPRFIFC........................................................................................................................................................................................................................................................................................................................................ 176
32 -10.100d1cr1a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}  ali model 3D-neighbors follow..  12  25.........................................................................................................................................................................................................................................................................................................................................................................INDKTLGARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLEESVEETAEDLIGLHNRV-SDSLKREIIENGKFDQWFDELFGNDHLYDSFAEAETDRLLAKLAYMRSGLGCDVIILDH-GESDERKMIDNLMTKLKGFAKSTGVVLVVICH----LKNPDKGKAHEEGRPVSITDLRGSGALRQLSDTI-----IALERNQQGDMPNLVLVRILKCRFTGDTGIAGYM.. 263
33 -10.100d1yksa1 c.37.1.14 (A:187-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}  ali model 3D-neighbors follow..  12  2................................................................................................................................................................................................................................................................................................................................................................................LKKGMTTVLDFHPGAGKTRLPQILAECARRRLRTLVLA------------------TRVVLSEMKEAFH-GLDVKFHTQAFSAHGSGREVIDAMCHATLTYRMLEPTRVVNWEVIIMDE--AHFLDPASIAARGWAAHRARANESATILMT................................................................................ 134
34 -9.890d1jnrb_ d.58.1.5 (B:) Adenylylsulfate reductase B subunit {Archaeoglobus fulgidus [TaxId: 2234]}  ali model 3D-neighbors follow..  22  3.........FVNPEKCDGCKALERCEYICPNDLMTLD----KEKMKAYNREPDMCWECYSCVKMCPQGAIDVRGYVDYSPLGGACVPMRGTSDIMWTVKYRNGKVLRF........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 99
35 -9.820d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}  ali model 3D-neighbors follow..  3.........................................................................................................IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDP------------------ETKKRTGFRIITTEGKKKIFSSKFFTSKKLVGSYGVNVQYFEELAIPILER--------------AYREAKKDRRKVIIIDE--GKMELFSKKFRDLVRQIMHDPNVNVVATRDVHPLVKEIRRL.......................................................................................................................................................................................................................................................................................................................... 152
36 -9.570d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}  ali model 3D-neighbors follow..  12  10......................................................................................................................................................................................................................................................................................................................................................................................VAILGGESSGKSVLVNKLA---AVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQMALGHQRYIDYAVRHSHKI----FIDTDFITTQEGKAHPFLDSMIKEYPFDVTILDGLRSLGSQKQRQQFQQLLKKLLDKYKVPYIEILDRYNQVKAVIEKVL.................................................................. 182
37 -9.530d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}  ali model 3D-neighbors follow..  14  3....................................................................................................................................................................................................................................................................................................................................................................................KIILTIGCPGSGKSTWAREFIANINRDDYRQSIMAHEERDEYKYTKKKEGIVTGMQFDTAKSILYGGDSVKGVI--ISDTNLNPER-------RLAWETFAKEYGWKVEHKVFDVPWTELVKRNSKR-IDVLRSMYKSMREYLGLPVY............................................................................... 152
38 -9.270d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  13  4......................................................................................................................................................................................................................................................................................................................................................................................VFLTGPPGVGKTTLIHKASEVLKSSGGFYTEEVRQGGRRIGFDVVTLSGTRGPLSRVGLEPPPGKRECRVGQYVVDLTSFEQLALPVLR-------NADCSSGPGQRVCVIDE--GKMELFSQLFIQAVRQTLSTPGTIILGTIPVPKGKPLALVEEIRNRKDVKVFNVTKENRNHLLPDIVTCVQSS..................................... 187
39 -9.020d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus elongatus PCC 7942 [TaxId: 1140]}  ali model 3D-neighbors follow..  10  17..........................................................................................................................................................................................................................................................................................................................................................................DISHGGLPIGRSTLVSGTSGTGKTLFS------------QFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFASSVVRRELFRLVARLKQIGATTVMTTERYGVEEFVSDNVVILR............................................................... 195

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Ma H, Xiong H, Liu T, Zhang L, Godzik A., Zhang Z. Aggregate formation and synaptic abnormality induced by DSCR1. J Neurochem. 2004 Mar;88(6):1485-96.