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O15254.151-450
Query: sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 151-450), from H.sapiens

Results of FFAS03 search in SCOP175
Master-slave alignment does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst EIFGCFALTELSHGSNTKAIRTTAHYDPATEEFIIHSPDFEAAKFWVGNMGKTATHAVVFAKLCVPGDQCHGLHPFIVQIRDPKTLLPMPGVMVGDIGKKLGQNGLDNGFAMFHKVRVPRQSLLNRMGDVTPEGTYVSPFKDVRQRFGASLGSLSSGRVSIVSLAILNLKLAVAIALRFSATRRQFGPTEEEEIPVLEYPMQQWRLLPYLAAVYALDHFSKSLFLDLVELQRGLASGDRSARQAELGREIHALASASKPLASWTTQQGIQECREACGGHGYLAMNRLGVLRDDNDPNCTYLast
1 -78.200d1w07a3 e.6.1.2 (A:2-272) Acyl-coenzyme A oxidase 1, domains 1 and 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}  ali model 3D-neighbors follow..  50  129QIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARLITNG-KDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPSD................................................................................................................................................................ 270
2 -70.400d1w07a1 a.29.3.2 (A:273-461) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}  ali model 3D-neighbors follow..  38  3...................................................................................................................................................QLVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGHNGGIETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTERLAASD-----FATLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLWCSGLPELFAVYVPACTY 151
3 -23.700d1ukwa2 e.6.1.1 (A:32-258) Medium chain acyl-CoA dehydrogenase, NM domains {Thermus thermophilus [TaxId: 274]}  ali model 3D-neighbors follow..  29  117PALAAFALSEPGNGSDAAALKTRAIRQ--GDHYVLN-----GTKMWISN-GGEAEWVVVFATV--PELRHKGVVALVVE-------RGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGE.............................................................................................................................................................................. 226
4 -23.200d1r2ja2 e.6.1.1 (A:3-212) Protein FkbI {Streptomyces hygroscopicus [TaxId: 1912]}  ali model 3D-neighbors follow..  25  104..LAAVGFSERQAGSDLSAMRTRVRLD--GDTAVVD-----GHKVWTTA-AAYADHLVVFGL-----QEDGSGAVVVVP-------ADTPGVRVERVPKPSGCRAAGHADLHLDQVRVPAGAVLAGSG............................................................................................................................................................................ 209
5 -22.600d1rx0a2 e.6.1.1 (A:10-240) Isobutyryl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  25  122EKFASYCLTEPGSGSDAASLLTSAKKQ--GDHYILN-----GSKAFISGAGESDIY-VVMCRTGGPGPK--GISCIVVE-------KGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGS.............................................................................................................................................................................. 230
6 -22.500d1siqa2 e.6.1.1 (A:3-238) Glutaryl-CoA dehydrogenase GCDH {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  27  126ELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLN-----GTKTWITN-SPMADLFVVWAR-----CEDGCIRGFLLE-------KGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGASS........................................................................................................................................................................... 236
7 -22.500d1jqia2 e.6.1.1 (A:4-234) Butyryl-CoA dehydrogenase, NM domains {Rat (Rattus norvegicus) [TaxId: 10116]}  ali model 3D-neighbors follow..  33  120DKIGCFALSEPGNGSDAGAASTTAREE--GDSWVLN-----GTKAWITN-SWEASATVVFAST--RSRQNKGISAFLVP-------MPTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKENLLGEPG............................................................................................................................................................................ 231
8 -22.200d2d29a2 e.6.1.1 (A:2-234) Acyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}  ali model 3D-neighbors follow..  27  119EALGAWGLTEPGSGSDAAALKTKAEKV--EGGWRLN-----GTKQFITQ-GSVAGVYVVMART-SPERKHQGISAFAFF-------RPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGE.............................................................................................................................................................................. 232
9 -21.200d2c12a2 e.6.1.1 (A:2-260) Nitroalkane oxidase {Fusarium oxysporum [TaxId: 5507]}  ali model 3D-neighbors follow..  19  125EPLASLMHSEPNGTANWPGLQTTARKV--GNEWVIS-----GEKLWPSNSGKGADLACVVCRVSDDPSKATQIAVLLVT-RETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLL................................................................................................................................................................................ 257
10 -20.400d1ivha2 e.6.1.1 (A:6-241) Isovaleryl-coa dehydrogenase, NM domains {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  27  123EYIGALAMSEPNAGSDVVSMKLKAE--KKGNHYILN-----GNKFWITN-GPDADVLIVYAKTDLAAVPSRGITAFIVE-------KGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGH.............................................................................................................................................................................. 234
11 -17.200d1rx0a1 a.29.3.1 (A:241-393) Isobutyryl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  20  1...............................................................................................................................................GQGFLIAVRGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGEP------LASNQYLQFTLADMATRLVAARLMVRNAAVALQ----------------EERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQIL 135
12 -16.500d1r2ja1 a.29.3.1 (A:213-365) Protein FkbI {Streptomyces hygroscopicus [TaxId: 1912]}  ali model 3D-neighbors follow..  14  5....................................................................................................................................................LVAASLAYGRKSVAWGCVGILRACRTAAVAHARTREQFGRP------LGDHQLVAGHIADLWTAEQIAARVCEYASDHWDEGSPEMVPA----------------TILAKHVAAERAAAGAATAAQVLASAGAREGHVVERAYRDAKLMEII 134
13 -16.400d1ivha1 a.29.3.1 (A:242-392) Isovaleryl-CoA dehydrogenase, C-domain {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  12  1................................................................................................................................................KGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQK------IGHFQLMQGKMADMYTRLMACRQYVYNV-----------------AKACDEGHCTAKDCAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLY... 130
14 -16.100d2d29a1 a.29.3.1 (A:235-387) Acyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}  ali model 3D-neighbors follow..  21  1...............................................................................................................................................GKGFYDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGRP------IAEFEGVSFKLAEAATELEAARLLYLK-----------------AAELKDAGRPFTLEAAQAKLFASEAAVKACDEAIQILGGYGYVKDYPVERYWRDARLTRIG 134
15 -15.400d1siqa1 a.29.3.1 (A:239-392) Glutaryl-CoA dehydrogenase GCDH {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  18  5......................................................................................................................................................FGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVP------LARNQLIQKKLADMLT-----------------EITLGLHACLQLGRLKDQDKAAPEMVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIRHAMNLEAVNTY 131
16 -13.400d2c12a1 a.29.3.1 (A:261-430) Nitroalkane oxidase {Fusarium oxysporum [TaxId: 5507]}  ali model 3D-neighbors follow..  11  8....................................................................................................................................................LVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSK-----HIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDEALEWKVKL-------------EMAMQTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLF 141

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Jaroszewski L, Li W, Godzik A. In search for more accurate alignments in the twilight zone. Protein Sci. 2002 Jul;11(7):1702-13.