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Query: sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 151-450), from H.sapiens

Results of FFAS03 search in SCOP206
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst EIFGCFALTELSHGSNTKAIRTTAHYDPATEEFIIHSPDFEAAKFWVGNMGKTATHAVVFAKLCVPGDQCHGLHPFIVQIRDPKTLLPMPGVMVGDIGKKLGQNGLDNGFAMFHKVRVPRQSLLNRMGDVTPEGTYVSPFKDVRQRFGASLGSLSSGRVSIVSLAILNLKLAVAIALRFSATRRQFGPTEEEEIPVLEYPMQQWRLLPYLAAVYALDHFSKSLFLDLVELQRGLASGDRSARQAELGREIHALASASKPLASWTTQQGIQECREACGGHGYLAMNRLGVLRDDNDPNCTYLast
1 -78.600d1w07a3 e.6.1.2 (A:2-272) Acyl-coenzyme A oxidase 1, domains 1 and 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}  ali model 3D-neighbors follow..  51  129QIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARLITNG-KDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPS................................................................................................................................................................. 269
2 -67.900d1w07a1 a.29.3.2 (A:273-461) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}  ali model 3D-neighbors follow..  38  3...................................................................................................................................................QLVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGANGGIETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTERLAASDF-----ATLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLWCSGLPELFAVYVPACTY 151
3 -25.600d5af7a1 e.6.1.0 (A:3-232) automated matches {Advenella mimigardefordensis [TaxId: 1247726]}  ali model 3D-neighbors follow..  19  116..KPAICISEPNAGSAASEMTTRADKN---DHYILN-----GEKYWITG-GGVSKLHLIFARV--DDGVEQGIGAFITVLDDHGP----EGLKVGRRLYAMGVRGIPETHLEFHDLKIHKSMMITFPD............................................................................................................................................................................ 228
4 -24.100d1r2ja2 e.6.1.1 (A:3-212) Protein FkbI {Streptomyces hygroscopicus [TaxId: 1912]}  ali model 3D-neighbors follow..  25  104..LAAVGFSERQAGSDLSAMRTRVRLD---DTAVVD-----GHKVWTTA-AAYADHLVVFGL-----QEDGSGAVVVVP-------ADTPGVRVERVPKPSGCRAAGHADLHLDQVRVPAGAVLAGSG............................................................................................................................................................................ 209
5 -24.100d4iv6a1 e.6.1.0 (A:3-226) automated matches {Mycobacterium smegmatis [TaxId: 246196]}  ali model 3D-neighbors follow..  30  113ELRATMALTEPGGGSDLQAMRTVARRD---DDYVIN-----GSKTWISN-ARRSDLVALMCKTDPDAQPAHGVSILLVE--------KVPGFDVSRDLPKLGYKGVESCELNFTDARVPVSSLLGD.............................................................................................................................................................................. 223
6 -23.900d4p13a1 e.6.1.1 (A:10-241) Medium chain acyl-CoA dehydrogenase, NM domains {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  26  119PLMCAYCVTEPGAGSDVAGIKTKAEKK---DEYIIN-----GQKMWITN-GGKANWYFLLARS-PKAPANKAFTGFIVE-------ADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIG.............................................................................................................................................................................. 231
7 -23.800d4rm7a1 e.6.1.0 (A:1-229) automated matches {Slackia heliotrinireducens [TaxId: 471855]}  ali model 3D-neighbors follow..  22  118RLSYALAISEPEAGSDTRSMRTHVTRE--GDTLVMN-----GTKMFVNN-GEYAPALLVSAYDKTGDDGEPEFSFWMVP-------RSAAGIYAYPE-QKIGQSMLPFATVRFDNVEVKESWRLKG.............................................................................................................................................................................. 227
8 -22.800d2viga1 e.6.1.1 (A:34-258) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  33  114DKIGCFALSEPGNGSDAGAASTTARAE--GDSWVLN-----GTKAWITN-AWEASAAVVFAST--RALQNKSISAFLVP-------MPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPG............................................................................................................................................................................ 225
9 -22.300d3nf4a1 e.6.1.0 (A:5-232) automated matches {Mycobacterium thermoresistibile [TaxId: 1797]}  ali model 3D-neighbors follow..  25  120EQIGAYSLSEPQAGSDAAALRCAATPT--DGGYVIN-----GSKSWITH-GGKADFYTLFAR---TGEGSRGVSCFLVP-------ADQPGLSFGKPEEKMGLHAVPTTSAFYDNARIDADRRIGE.............................................................................................................................................................................. 227
10 -22.200d1rx0a2 e.6.1.1 (A:10-240) Isobutyryl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  24  122EKFASYCLTEPGSGSDAASLLTSAKKQ--GDHYILN-----GSKAFISGAGESDIY-VVMCR--TGGPGPKGISCIVVE-------KGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGS.............................................................................................................................................................................. 230
11 -22.000d4irna1 e.6.1.0 (A:4-230) automated matches {Oscillatoria sp. [TaxId: 272129]}  ali model 3D-neighbors follow..  24  117GWIASHAATEPQAGSDIYSLKTTAQKD--GDKYILN-----GYKHYVTN-GTIADLFIIFATI--PSLGKEGLTTFMIE-------KDTPGLILSKPISKMGMRTAEVPELRLENCEVSAANRLGE.............................................................................................................................................................................. 226
12 -21.700d2d29a2 e.6.1.1 (A:2-234) Acyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}  ali model 3D-neighbors follow..  27  119EALGAWGLTEPGSGSDAAALKTKAEKV--EGGWRLN-----GTKQFITQ-GSVAGVYVVMART-SPERKHQGISAFAFF-------RPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGE.............................................................................................................................................................................. 232
13 -21.500d1buca2 e.6.1.1 (A:1-232) Butyryl-CoA dehydrogenase, NM domains {Megasphaera elsdenii [TaxId: 907]}  ali model 3D-neighbors follow..  26  121TKLGAFGLTEPNAGTDASGQQTIATKN-DDGTYTLN-----GSKIFITN-GGAADIYIVFA-MTDKSKGNHGITAFILE-------DGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGE.............................................................................................................................................................................. 231
14 -21.400d2jifa1 e.6.1.0 (A:52-279) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  27  118EKVGSFCLSEAGAGSDSFALKTRA--DKEGDYYVLN-----GSKMWISS-AEHAGLFLVMANV--PTIGYKGITSFLVD-------RDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQI............................................................................................................................................................................. 228
15 -21.100d3mpia1 e.6.1.0 (A:1-231) automated matches {Desulfococcus multivorans [TaxId: 897]}  ali model 3D-neighbors follow..  26  121EFLGGFGITEPDAGSDVMAMSSTAEDK--GDHWLLN-----GSKTWISN-AAQADVLIYYAYT--KAAGSRGLSAFVIEPRN------FPGIKTSNL-EKLGSHASPTGELFLDNVKVPKENILGK.............................................................................................................................................................................. 230
16 -21.000d3mkha1 e.6.1.0 (A:2-259) automated matches {Podospora anserina [TaxId: 5145]}  ali model 3D-neighbors follow..  17  126SPLASLVFSEPGGVANAPGFQTTARLE---DEWVIN-----GEKMWATNCAKGCDLACVVCRDATTPLEENKVMIILVT-RADLDRNGEGSFEVLRHVATPGHTSVSGPHVRYTNVRVPTKNVL................................................................................................................................................................................ 255
17 -20.900d3r7ka1 e.6.1.0 (A:21-248) automated matches {Mycobacterium abscessus [TaxId: 561007]}  ali model 3D-neighbors follow..  23  119KMIGSLGVTEPGAGSDVANLRTRAVRE---DTYVVN-----GAKTFITS-GVRADFVTTAVR--TGGPGYGGVSLLVID-------KNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVPADNLVGA.............................................................................................................................................................................. 227
18 -20.500d2pg0a1 e.6.1.0 (A:6-235) automated matches {Geobacillus kaustophilus [TaxId: 235909]}  ali model 3D-neighbors follow..  28  117ELITAIAMTEPGAGSDLANISTTAVKD---DYYIVN-----GQKTFITN-GIHADLIVVACKT-QAKPPHRGISLLVVE-------RDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEG............................................................................................................................................................................ 230
19 -18.600d3r7ka2 a.29.3.0 (A:249-398) automated matches {Mycobacterium abscessus [TaxId: 561007]}  ali model 3D-neighbors follow..  16  1...............................................................................................................................................NSGFLQIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGRP------LTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLA-----------------GEDVVAEVSMAKNTAVYACDYVVNEAVQIFGGMGYMRESEIERHYRDCRILGIG 134
20 -17.800d4rm7a2 a.29.3.0 (A:230-384) automated matches {Slackia heliotrinireducens [TaxId: 471855]}  ali model 3D-neighbors follow..  19  1................................................................................................................................................KGFSQLYSLLEYGRVFTCAAALGEAQAAMEDAVAWARGREAFGQR------IADLQQVQMKLTEMEVKLTNMRNL-------------------GAAREYDRGEHKRLSVALMKYYVPKAATEVASDAMQILGGRGYIQENRVSSIWQD....... 126
21 -17.600d3ii9a1 e.6.1.0 (A:3-242) automated matches {Burkholderia pseudomallei [TaxId: 320372]}  ali model 3D-neighbors follow..  29  129EWIGCFGLTEPNHGSDPGSMVTRAR--KVPGGYSLS-----GSKMWITN-SPIADVFVVWAKLDEDGRD--EIRGFILE-------KGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENIL................................................................................................................................................................................ 235
22 -17.500d3mkha2 a.29.3.0 (A:260-427) automated matches {Podospora anserina [TaxId: 5145]}  ali model 3D-neighbors follow..  15  1...............................................................................................................................................GQGAKVAFGAFDGSAVLVGAMGVGLMRAAFDAALKFAKEDNRGG-----AVPLLERQAFADLLSGVKIQTEAARALT--------------KAAHAMENGPGDYDARRELALAAKVFCSEAAVKACTDVINAVGISAYDLQRPFSDLLNTAVVLPIF 139
23 -16.900d5af7a2 a.29.3.0 (A:233-392) automated matches {Advenella mimigardefordensis [TaxId: 1247726]}  ali model 3D-neighbors follow..  19  1...............................................................................................................................................KRGFAALMSAYNAQRVGAGAVALGIAQCAFEEGVAYLKRREQFGRP------LAEFQGLQWMVADMSVQLEAARLM-------------------RSAAVSGETFPDINKAAQAKIFAAETANKVTNDALQFFGSSGYGRHNPMERHVRDARMFTIA 133
24 -16.700d1rx0a1 a.29.3.1 (A:241-393) Isobutyryl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  20  1...............................................................................................................................................GQGFLIAVRGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGEP------LASNQYLQFTLADMATRLVAARLMVRNAAVALQ----------------EERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQIL 135
25 -16.100d2pg0a2 a.29.3.0 (A:236-385) automated matches {Geobacillus kaustophilus [TaxId: 235909]}  ali model 3D-neighbors follow..  16  1................................................................................................................................................KGFYYLMEKLQQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGKR------VSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAGKQIVTE-----------------VSMAKWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIY 133
26 -16.100d2d29a1 a.29.3.1 (A:235-387) Acyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}  ali model 3D-neighbors follow..  21  1...............................................................................................................................................GKGFYDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGRP------IAEFEGVSFKLAEAATELEAARLLY------------------KAAELKDAGRPFTLEAAQAKLFASEAAVKACDEAIQILGGYGYVKDYPVERYWRDARLTRIG 134
27 -16.000d1r2ja1 a.29.3.1 (A:213-365) Protein FkbI {Streptomyces hygroscopicus [TaxId: 1912]}  ali model 3D-neighbors follow..  16  5....................................................................................................................................................LVAASLAYGRKSVAWGCVGILRACRTAAVAHARTREQFGRP------LGDHQLVAGHIADLWTAEQI----------------AARVCEYASDHWDEGSPEMVPATILAKHVAAERAAAGAATAAQVLASAGAREGHVVERAYRDAKLMEII 134
28 -15.900d4irna2 a.29.3.0 (A:231-381) automated matches {Oscillatoria sp. [TaxId: 272129]}  ali model 3D-neighbors follow..  17  1...............................................................................................................................................GTGLAIFNHSMEWERGFILAAAVGTMERLLEQSIRYARSHKQFGQA------IGKFQLVANKLVEMKLRLENAKAY-------------------KVAWMKENKQMALLEASMANLYISEAWVQSCLEAIEIHGAYGYLTNTELERELRDAIASKFY 134
29 -15.100d3d9da2 a.29.3.1 (A:261-433) automated matches {Fungus (Fusarium oxysporum) [TaxId: 5507]}  ali model 3D-neighbors follow..  12  7...................................................................................................................................................GLVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSK-----HIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDEALEWKVKL-------------EMAMQTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLF 141
30 -14.600d4o5ma2 a.29.3.0 (A:239-381) automated matches {Brucella suis [TaxId: 204722]}  ali model 3D-neighbors follow..  17  1.........................................................................................................................................................LDYERVVLAGGPLGIMAACLDVVVPYVHERKQFDQP------IGEFQLMQCKLADMYVTFNASRAYVYAV-----------------AAACDRGETTRKDAAGCILYSAENATQMALQAIQSLGGNGYINDYPTGRLLRD....... 117
31 -13.000d4hr3a1 e.6.1.0 (A:3-253) automated matches {Mycobacterium abscessus [TaxId: 561007]}  ali model 3D-neighbors follow..  22  135DIRSAFCMTEPD-SSDATNMAATAVVE---DEVVIN-----GRKWWSTGVGHPDCKVIIFMGLTDPNAHRYARHSMVLVPMDT------PGITVERMLPTMGFYDEPGGHVSFDNVRLPADAFI................................................................................................................................................................................ 248
32 -12.400d3ii9a2 a.29.3.0 (A:243-395) automated matches {Burkholderia pseudomallei [TaxId: 320372]}  ali model 3D-neighbors follow..  21  5......................................................................................................................................................FTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP------LAANQLIQKKLADMQT-----------------EITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTY 131

FFAS is supported by the NIH grant R01-GM087218-01
8 5 9 5 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Ma H, Xiong H, Liu T, Zhang L, Godzik A., Zhang Z. Aggregate formation and synaptic abnormality induced by DSCR1. J Neurochem. 2004 Mar;88(6):1485-96.