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Query: sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1 (Range: 1651-1950), from H.sapiens

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst NVDLQSIHKKAVSILGDEVFRFQLTLYPDATEGEAYADMSKVDGKLSFKVGCIQIVYVHKFFMSLLNFLNNFQTAKEALSTATVQAAERAASSMKDLAQKSFRLLMDINLKAPVIIIPQSSVSPNAVIADLGLIRVENKFSLVPMEHYSLPPVIDKMNIELTQLKLSRTILQASLPQNDIEILKPVNMLLSIQRNLAAAWYVQIPGMEIKGKLKPMQVALSEDDLTVLMKILLENLGEASSQPSPTQSVQETVRVRKVDVSSVPDHLKEQEDWTDSKLSMNQIVSLQFDFHFESLSIILYLast
1 -107.000sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1 (Range: 1651-1950)  ali  100  1NVDLQSIHKKAVSILGDEVFRFQLTLYPDATEGEAYADMSKVDGKLSFKVGCIQIVYVHKFFMSLLNFLNNFQTAKEALSTATVQAAERAASSMKDLAQKSFRLLMDINLKAPVIIIPQSSVSPNAVIADLGLIRVENKFSLVPMEHYSLPPVIDKMNIELTQLKLSRTILQASLPQNDIEILKPVNMLLSIQRNLAAAWYVQIPGMEIKGKLKPMQVALSEDDLTVLMKILLENLGEASSQPSPTQSVQETVRVRKVDVSSVPDHLKEQEDWTDSKLSMNQIVSLQFDFHFESLSIILY 300
2 -80.100sp|Q96RL7|VP13A_HUMAN Vacuolar protein sorting-associated protein 13A OS=Homo sapiens GN=VPS13A PE=1 SV=2 (Range: 1051-1350)  ali follow..  43  54DSDITAIYKKAVYITGKEVFSFKMVSYMDATAGSAYTDMNVVDIQVNLIVGCIEVVFVTKFLYSILAFIDNFQAAKQALAEATVQAAGMAATGVKELAQRSSRMALDINIKAPVVVIPQSPVSENVFVADFGLITMTNTFHMITESQSSPPPVIDLITIKLSEMRLYRSRFINDAYQEVLDLLLPLNLEVVVERNLCWEWYQEVPCFNVNAQLKPMEFILSQEDITTIFKTLHGNIWYEKDGSASPA..................................................... 300
3 -74.000sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1 (Range: 1051-1350)  ali follow..  65  86DVDPKTVHKKAVSIMGNEVFRFNLDLYPDATEGDLYTDMSKVDGVLSLNVGCIQIVYLHKFLMSLLNFLNNFQTAKESLSAATAQAAERAATSVKDLAQRSFRVSINIDLKAPVIVIPQSSISTNAVVVDLGLIRVHNQFSLVSDEDYLNPPVIDRMDVQLTKLTLYRTVIQPGIYHPDIQLLHPINLEFLVNRNLAASWYHKVPVVEIKGHLDS..................................................................................... 300
4 -70.400sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1 (Range: 1201-1500)  ali follow..  46  1.................................................................LNFLNNFQTAKESLSAATAQAAERAATSVKDLAQRSFRVSINIDLKAPVIVIPQSSISTNAVVVDLGLIRVHNQFSLVSDEDYLNPPVIDRMDVQLTKLTLYRTVIQPGIYHPDIQLLHPINLEFLVNRNLAASWYHKVPVVEIKGHLDSMNVSLNQEDLNLLFRILTENLCEGTEDLDKVKPRVQETGEIKEPLEISISQSKNTLTTGVEEIRSVDIINMLLNFEIKEVVVTLM 239
5 -67.100sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1 (Range: 601-900)  ali follow..  12  3..............TTSSLLKIKF---------ETNPEDSPADQTLIVQSQPVEVIYDAKTVNAVVEFFQSLEQITSATLMKLEEIKERTATGLTHIIETRKVLDLRINLKPSYLVVPQTHEKSDLLILDFGTFQLNSKDQTNSSLEEIMDKAYDKFDVEIKNVQLLFARAEETWKPSTMHILQPMDIHVELAKAMVEK-DIRMARFKVSGGLPLMHVRISDQKMKDVLYLMNSIPLPQKSSAQSPERQVSSIPIISGGTKGLLGTSLLLDTVESESDDEAEDGEPQTCKSMKGSELK.. 298
6 -64.400sp|Q96RL7|VP13A_HUMAN Vacuolar protein sorting-associated protein 13A OS=Homo sapiens GN=VPS13A PE=1 SV=2 (Range: 1201-1500)  ali follow..  30  1.................................................................................................AQRSSRMALDINIKAPVVVIPQSPVSENVFVADFGLITMTNTFHMITESQSSPPPVIDLITIKLSEMRLYRSRFINDAYQEVLDLLLPLNLEVVVERNLCWEWYQEVPCFNVNAQLKPMEFILSQEDITTIFKTLHGNIWYEKDGSASPAVTKDQYSATSASHHSGGATVVTAAVVEVHSRALLVKTTLNISFKTDDLTMVLY 208
7 -60.100sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1 (Range: 1951-2250)  ali follow..  16  3...............................GRPDPLLRREHDIRVSLRMASVQYVHTQRFQAEVVAFIQHFTQLQDVLGRQRAAIEGQT---VRDQAQRCSRVLLDIEAGAPVLLIPESSRSNNLIVANLGKLKVKNKFLFAGFPGTFSVPSASPTGIPKHSLRKTTSTEEPRGTHSQGQFTMPLAGMSLGSLKSEFVPSTSTKQQGPQPTLSVGQESSSPEDHVCLLDCVVVDLQDMDIFAAERHPREYSKAPEDSSGDLIFPSYFVRQTGGSLLTESHTVPDISIHGNLSSVHCSL. 289
8 -60.100sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1 (Range: 601-900)  ali follow..  15  2............ADPDGPVFEMLY---------ERNPAHSHFERRLNVSTRPLNIIYNPQAIKKVADFFYKGKRVAEAARRQYNKLKMQTKAEIRQTLEESKRWTVRLDISAPQVIFPDDFKNPVLVVVDLGRMLLTNTQDNSRRKHLMSTKMYERYSLSFMDLQIMVGRVKDNWKHGPTHVVEKFNVHLQLERRLIYTSDPKYPGAVLSGNLPDLKIHINEDKISALKNCFA................................................................... 299
9 -56.600sp|Q96RL7|VP13A_HUMAN Vacuolar protein sorting-associated protein 13A OS=Homo sapiens GN=VPS13A PE=1 SV=2 (Range: 601-900)  ali follow..  18  1................................................................IVEFFRPLAQLTAATLTKLEEFRSKTATGLLYIIETQKVLDLKINLKASYIIVPQDSPTSNLLLLDLGHLKVTSKSRGEANLKEIMDRAYDSFDIQLTSVQLLYSRVGDNWRVSTQHILVPMHFNLELSKAMVFM-DVRMPKFKIYGKLPLISLRISDKKLQGIMELIESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIPLLELPSVSEDDSMTTFKIRFEVPKVLIEFY 295
10 -52.800sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1 (Range: 1501-1800)  ali follow..  100  151NVDLQSIHKKAVSILGDEVFRFQLTLYPDATEGEAYADMSKVDGKLSFKVGCIQIVYVHKFFMSLLNFLNNFQTAKEALSTATVQAAERAASSMKDLAQKSFRLLMDINLKAPVIIIPQSSVSPNAVIADLGLIRVENKFSLVPMEHY........................................................................................................................................................ 298
11 -52.400sp|Q96RL7|VP13A_HUMAN Vacuolar protein sorting-associated protein 13A OS=Homo sapiens GN=VPS13A PE=1 SV=2 (Range: 451-750)  ali follow..  21  94GLPDNSEKPRLLSSLDDAMSLFQIT-------FEINPLDETVSQRCIIEAEPLEIIYDARTVNSIVEFFRPPAQLTAATLTKLEEFRSKTATGLLYIIETQKVLDLKINLKASYIIVPQDSPTSNLLLLDLGHLKVTSKSRGEANLKEIMDRAYDSFDIQLTSVQLLYSRVGDNWRVSTQHILVPMHFNLEL............................................................................................................ 300
12 -47.100sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1 (Range: 1801-2100)  ali follow..  22  125DLTCGEFYRERFTTSGEEALIFQTFKYGR----PDPLLRREHDIRVSLRMASVQYVHTQRFQAEVVAFIQHFTQLQDVLGRQRAAIEGQT---VRDQAQRCSRVLLDIEAGAPVLLIPESSRSNNLIVANLGKLKVKNKFLFAGFPGASPTGIPKHSLRKTTSTEEPRGT.................................................................................................................................. 300
13 -46.900sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1 (Range: 1201-1500)  ali follow..  18  24DLTQNVKNQYVVSIGNSVGFESVFVRMEDAALTETFVERSKQECFLNLKMASLHYNHSAKFLKELTLSMDELETPRKTREPFILEENEIYGFDLASSHLDTVKLILNINIESPVVSIPRKPGSPELLVGHLGQIFIQNFVAGDDES------RSDRLQVEIKDIKLYSLNCTQLAGRQAFHILNNTTIQFKLEK.......................................................................................................... 299
14 -45.500sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1 (Range: 451-750)  ali follow..  18  136GLRQQDIVPSLVASIGDTTSSLLKIKF------ETNPEDSPADQTLIVQSQPVEVIYDAKTVNAVVEFFQSNKGITSATLMKLEEIKERTATGLTHIIETRKVLDLRINLKPSYLVVPQTHEKSDLLILDFGTFQLNSKDQTNSSLEEIMDKAYDKFD.............................................................................................................................................. 300
15 -44.400sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1 (Range: 1351-1650)  ali follow..  17  1...............................................................................EPFILEENEIYGFDLASSHLDTVKLILNINIESPVVSIPRKPGSPELLVGHLGQIFIQNFVAGDDESR------SDRLQVEIKDIKLYSLNCTQLAGRQAFHILNNTTIQFKLEKSLSPDDLGTSSIMKIEGKFNPVQVVLAKHVYEQVLQTLDNLVYSEDLNKYPASATSSPCPDSPLPPLSSHSSLSNTSQKSLSVKEVKSFTQIQATFCISELQVQLS 282
16 -40.400sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1 (Range: 1801-2100)  ali follow..  100  3........................................................................................................................................................VIDKMNIELTQLKLSRTILQASLPQNDIEILKPVNMLLSIQRNLAAAWYVQIPGMEIKGKLKPMQVALSEDDLTVLMKILLENLGEASSQPSPTQSVQETVRVRKVDVSSVPDHLKEQEDWTDSKLSMNQIVSLQFDFHFESLSIILY 150
17 -40.400sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1 (Range: 2101-2400)  ali follow..  13  3..........................................................................................................QGQFTMPLAGMSLGSLKSEFVPSTSTKQQGPQPTGQESSSPEDHVCLLDCVVVDLQDMDIFAAERHPRRQTGGSLLTEPCRLKLQVERNLDKEISHTVPDISIHGNLSSVHCSLDLYKYKLIRGLLENNLGEPIEEFMRPYDLQDPRI--------------------HTVLSGEVYTCMCFLIDMVNVSLELK 199
18 -36.800sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1 (Range: 451-750)  ali follow..  15  111.ATEGTMFPLLVFPNPQKEVGRVSQSFGLQTTYERNPAHSHFERRLNVSTRPLNIIYNPQAIKKVADFFYKELRVAEAARRQYNKLKMQTKAEIRQTLDESKRWTVRLDISAPQVIFPDDFKNPVLVVVDLGRMLLTNTQDNSR............................................................................................................................................................ 299
19 -36.500sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1 (Range: 751-1050)  ali follow..  10  15..........................................................................................................DDEYKTPLATPPNTPPPESSSS--TPPFSGVEFSEEQLQAHLMSTKMYERYSLSFMDLQIMVGRVKDNWKVGPTHVVEKFNVHLQLERRLIYTSDPKYPGAVLSGNLPDLKIHINEDKISALKNCFALLTMKTSDTQIKEKIFPQEEQRGSLQDSVMNLTQSIVLLEQHTREVLVESQLLLAEFKVNCMQLGVE 219
20 -26.600sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1 (Range: 751-1050)  ali follow..  10  1..............................................................................................................................................................VEIKNVQLLFARAEETWKPSTMHILQPMDIHVELAKAMVEK-DIRMARFKVSGGLPLMHVRISDQKMKDVLYLMNSIPLPQKSSAQSPERQVSSIPIISGGEPQTCKSMKGSELKKAAEVPNEELINLLLKFEIKEVILEFT 175
21 -25.300sp|Q96RL7|VP13A_HUMAN Vacuolar protein sorting-associated protein 13A OS=Homo sapiens GN=VPS13A PE=1 SV=2 (Range: 901-1200)  ali follow..  52  204DSDITAIYKKAVYITGKEVFSFKMVSYMDATAGSAYTDMNVVDIQVNLIVGCIEVVFVTKFLYSILAFIDNFQAAKQALAEATVQAAGMAATGVKEL........................................................................................................................................................................................................... 300
22 -22.300sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1 (Range: 1951-2250)  ali follow..  52DLREGIATSRMIDRKNDQMIDISYKQ-------------DKNGSQIDAVLDKLYVCASVEFLMTVADFFIK-PENVAKETQILPRQTATGKVKIEKDDSVRPNMTLKAMITDPEVVFVASLTKADAPAL----ASFQCNLSLSTSKLE------QMMEASVRDLKVLACPFLEKRGKNITTVLQPCSLFMEKCTWASGK-------QNINIMVKEFIIKISPIILNTVLTIMAALSPKTKEDGSKDTSKEMEN............................................... 287
23 -20.800sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1 (Range: 1501-1800)  ali follow..  15  1....................................................................................................................................................................................PIERESELTFSLSPDDL----GTSSIMKIEGKFVNVQVVLAKHVYEQVLQTLDNLVYSEDLNKYPASATSSPCPDSPLPPLSTHSSLSNTSQKSLSVKEVKSFTQIQATFCISELQVQLS 132
24 -20.500sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1 (Range: 1051-1350)  ali follow..  12  174DLTQNVKNQYVVSIGNSVGYENIISDIGYEALSFTFVERSKQECFLNLKMASLHYNHSAKFLKELTLSMDELEENF--RGMLKSAATKVTTVLATKTAEYSEMVSL---FETP........................................................................................................................................................................................... 296
25 -18.700sp|Q96RL7|VP13A_HUMAN Vacuolar protein sorting-associated protein 13A OS=Homo sapiens GN=VPS13A PE=1 SV=2 (Range: 1501-1800)  ali follow..  12  2.................................................FQEMYICASVEFLQTVANVFLEAYTTGTAVETSVQTWTAKEEVP----TQESVKWEINVIIKNPEIVFVADMTDAPALVITTQCEICYKGNLENST-----------MTAAIKDLQVRACPFLPVKRKGKTTVLQPCDLFYQTTQ-------KGTDPQVIDMSVKSLTLKVSPVIINTMITITSALYTTKETIPEETASSTAHLWEKKDTKTLKMWFLEESNETEKIAPTTELVPKGEIKMNIDSIFIVL. 233
26 -18.300sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1 (Range: 2401-2700)  ali follow..  1.......................................................FLIFDWLLLVHDFLRHRNSSSESAIVPKTVKSGVVTKRSSLPVSNERHLEVKVNVTGTEFVVIEDVSDTNAIILKGTTVLTYKPRFVD-----------RPFSGSLFGIEVFSCRLGNE-HDTALSIVDPVQIQMELVGNSSYQNSSGLMDPVLEIQLQALDIRLSYNDVQLFLAIAKSIPEQANAAVPDSVALESDSVGTYLPGASRVGEEIREGTRHTLDPVLELQLAQELGFSMDDCRKAL. 259
27 -17.800sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1 (Range: 901-1200)  ali follow..  73  236DVDPKTVHKKAVSIMGNEVFRFNLDLYPDATEGDLYTDMSKVDGVLSLNVGCIQIVYLHKFLMSL........................................................................................................................................................................................................................................... 300
28 -15.200sp|Q7Z7G8|VP13B_HUMAN Vacuolar protein sorting-associated protein 13B OS=Homo sapiens GN=VPS13B PE=1 SV=2 (Range: 1051-1350)  ali follow..  13  1.......................................................................................ERMKEFIGIVWNAVKHLTLQLEVQSCCVFIPNDSSMPGTLVLCLPQIKIISAGHKYMEPLQEIPFVIPRWTISLHNFSIYTLL----GKQVTLCLVEPMGCTSTLAVTSQKLLATGPDTVCLHVDLESLEIKCSNPQVQLFYELTDIMNKTSTCSPSADIGTTTEGDSIQAGEESPFSDSVTLEQTTSNIGGTSGRVSLWMQWVLPKITIKLF 288
29 -15.000sp|Q96RL7|VP13A_HUMAN Vacuolar protein sorting-associated protein 13A OS=Homo sapiens GN=VPS13A PE=1 SV=2 (Range: 751-1050)  ali follow..  12  1................................................................................................................................................................................................SKAMVFM-DVRMPKFKIYGKLPLISLRISDKKLQGIMELIESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISVKSIRTRKLQKQDCSVNMTTFKIRFEVPKVLIEFY 145
30 -13.900sp|Q7Z7G8|VP13B_HUMAN Vacuolar protein sorting-associated protein 13B OS=Homo sapiens GN=VPS13B PE=1 SV=2 (Range: 601-900)  ali follow..  36...............................................IPTRHTSVTLLKCTC-TISMAEFNLLDHLLPVIMGEKNSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMYAEQ-----------LVHVVSSLTQPSDNLLHYCYVHCYLKIFGFQAGLTSLDCSGSYLPVPVIPSFSTALYGKLLKLPTKRSQIAITEGIFELPNLTIQATRAQTLLLQAIYQSWSHLGNVSSSAVIEALINEIFLSIGVKSKNPLPTLEGSIQNVEKYCSTSLVKCASGTMGSIKICAK 281
31 -13.400sp|Q96RL7|VP13A_HUMAN Vacuolar protein sorting-associated protein 13A OS=Homo sapiens GN=VPS13A PE=1 SV=2 (Range: 1351-1650)  ali follow..  110DKRPHKATPRMIGLTVGFDKKDMM---------DIKYRKVRDGCVTDAVFQEMYICASVEFLQTVANVFLEAYTTGTAVETSVQTWTAKEEVP----TQESVKWEINVIIKNPEIVFVADMTDAPALVITTQCEICYKGNLEN-----------STMTAAIKDLQVRACPFLPVKRKGKTTVLQPCDLFYQTTQKGTDP-------QVIDMSVKSL.................................................................................... 299
32 -13.300sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1 (Range: 1351-1650)  ali follow..  20  1.......................................................................................................................................................................................................................MNVSLNQEDLNLLFRILTENLCEGTEDLDKVKPRVQETGEIKEPLEISISQDVHDSKNTLTTGVEEIIINMLLNFEIKEVVVTLM 89
33 -13.000sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1 (Range: 2101-2400)  ali follow..  13  2......................................................................................................NMTLKAMITDPEVVFVASLTDAPALTASFQCNLSLSTSKLEQM-----------MEASVRDLKVLACPFLEKRGKNITTVLQPCSLFMEKCTWASGK-------QNINIMVKEFIIKISPIILNTVLTIMAALSPKTKEDGSKDTSKEMENLWGIKSINDYNTWFLGVDTATEITESFKGIEHSNCGVVVESIQVTL. 187
34 -12.600sp|Q2TAZ0|ATG2A_HUMAN Autophagy-related protein 2 homolog A OS=Homo sapiens GN=ATG2A PE=1 SV=3 (Range: 1051-1350)  ali follow..  3.................................HLDPHKNVKEFLVTLRLHKATLRHYMSWHSQLLEFLD------------------VLDDPVLGYLPPTVITILHTHLFSCSVYRPLYLPVRVLIT--AETFTLSSNIIMDTSTFL--------LRFILDDSALYLSDKCEV-RRDYVCVLDVDLLELVIKWKGSTEGKLSQPLFELRCSNNVVHVHSCADSCALLVNLLQYVMSTGDLHPPPRPPSPTEIAGQKLSESPASLPSCPPVETALINQR..................... 231
35 -12.100sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1 (Range: 2251-2550)  ali follow..  134......................................STKDSSCFTVVLNNLRVFLIFDWLLLVHDFLRHRNSSSESAIVPKTVKSGVVTKRSSLPVSNERHLEVKVNVTGTEFVVIEDVSDTNAIILKGTTVLTYKPRFVDRP-----------FSGSLFGIEVFSCRLGNE-HDTALSIVDPVQIQMELVGN......................................................................................................... 295
36 -11.900sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1 (Range: 1651-1950)  ali follow..  130..............FDDSLVHINIFLVDKKHP-EFSSSYNRVNRSIDVDFNCLDVLITLQTWVVILDFFGIGSTADNHAMRLPPEGILHNVKLEPHASMESGNTKLDLKVHSLSLVL--NKTTSELAKANVSKLVAHLEMIEGDL----------ALQGSIGSLSLSDLTCHGEFYRERFTTSGEEALIFQT............................................................................................................ 299
37 -11.600sp|Q96BY7|ATG2B_HUMAN Autophagy-related protein 2 homolog B OS=Homo sapiens GN=ATG2B PE=1 SV=5 (Range: 1201-1500)  ali follow..  12  10...........................................................SWHEQILYFLN------------------IADEPVLGYNPPTSFTTFHVHLWSCALDYPLYLPIRSLLT--VETFSVSSSVALDKSSST--------LRIILDEAALHLSDKCNTLSRDYVRVMDMGLLELTITAVKSDSDGEQTPRFELHCSSDVVHIRTCSDSCAALMNLIQYIASYGDLQTPNKADMKPGAFQRRSKVDSSGRSSSRGPVLPEADQQ..................... 207
38 -10.900sp|Q2TAZ0|ATG2A_HUMAN Autophagy-related protein 2 homolog A OS=Homo sapiens GN=ATG2A PE=1 SV=3 (Range: 151-450)  ali follow..  12  1...........................................................................................EGLEMFAQTIETVRIKVTFLDTVVRVPGDGERGVAVEVRVQRLEYCDEAVRDPSQAPPVDPAFLHKLLQLAGVRLHYEELPAQEEPPEPPLIGSCSGYMELMVKLKQNEAFPGPKLEVAGQLGSLHLLLTPRQLQQLQELLSAVSLTDHEGLADKLNKSRPLGAED........................................... 176
39 -10.300sp|Q7Z7G8|VP13B_HUMAN Vacuolar protein sorting-associated protein 13B OS=Homo sapiens GN=VPS13B PE=1 SV=2 (Range: 1-300)  ali follow..  34DVVLSKLELKLDVLEQELKLPFTFLSGHIHELRIHVPWTKLGSEPVVITINTMECILKLKDGIQDDH--SCGSNSTNRSTAESTKSSIKPRRMQQAAPTDPDL-NVNIVINNLILKYVEDDIVLSVNITSAECYTVGELWDRAFMDISATDLVLRKV-INFSDCTVCLDKRNASGKIEFYQLLYKCSFRTRLHFTYENLNSKMPSVIKIHTLVESLKLSITDQQLPMFIRIMQ................................................................... 279
40 -10.200sp|Q7Z7G8|VP13B_HUMAN Vacuolar protein sorting-associated protein 13B OS=Homo sapiens GN=VPS13B PE=1 SV=2 (Range: 151-450)  ali follow..  1.........................................................................................................VNIVINNLILKYVEDDIVLSVNITSAECYTVGELWDRAFMDISATDLVLRKV-INFSDCTVCLDKRNASGKIEQDPLLYKCSFRTRLHFTYENLNSKMPSVIKIHTLVESLKLSITDQQLPMFIRIMQLGIALYYGEIGNFKEGEIEDLTCHNKDMLGNITGSEDETRIDMQYPAQHKGQ............... 181
41 -10.000sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1 (Range: 151-450)  ali follow..  11  11........................................................................KKPFKGLDRSKDKPKEAKKDTFVEKLATQVIKNVQVKITDIHIKYEDDVTDPKSFGVTLGELSLLTANEHWTPCILNEADKIIYKLIRLDSLSAYEILTSGNIPPNYQYIFQPISASAKLYMNPYAESELKTPKLDCNIEIQNIAIELTKPQYLSMIDLLES.................................................................. 197
42 -9.960sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1 (Range: 2701-3000)  ali follow..  3........................................................................................................GVEIKAESVCICFIDDCMDCDVPLAE---LTFSRLNFLQRVRTSPEGYAHFTLSGDYYNRALSG------------PFIEPWPCSVSWQQQAASRLHPPRLKLEAKAK-PRLDINITSVLIDQYVSTKESWMADYCKDDKDIESAKSEDWMGSSVDPPCFGQSLPLVYLRTRSTASL................... 165
43 -9.880sp|Q96RL7|VP13A_HUMAN Vacuolar protein sorting-associated protein 13A OS=Homo sapiens GN=VPS13A PE=1 SV=2 (Range: 151-450)  ali follow..  11  1.............................................LQVKISSIHIRYEDDITNRDKPLSFGISLQNLSMQTTDQYWVPCLHDETEKLVRK---------------------------LIRLDNLFAYWNVKSQMFYLSDYDNSLDDLKNGIVN--------ENIVPEGYDFVFRPISANAKLVMNRRSDFDFSAPKINLEIELHNIAIEFNKPQYFSIMELLES.................................................................. 154
44 -9.860sp|Q2LD37|K1109_HUMAN Uncharacterized protein KIAA1109 OS=Homo sapiens GN=KIAA1109 PE=1 SV=2 (Range: 3001-3300)  ali follow..  13  85.......................................QGNYLRCVAEVGSFEHNLTTDLLNHLVVFMKEVNEVIQKVSGGEQPIPLWNEHDGTADGDKPKILLYSLNLQFKGIQVTATTPSMRAVRFETGLIELELSNRLQTKASPGSSSYLKLFGKCQVDLNLALGQIVKEEAGSDFHQVAYFKTRIGLRNALREEISGSSDREAVLITLNRPIVYAQPVAFDRAVLFWLNYKAA.............................................................. 291
45 -9.600sp|Q96RL7|VP13A_HUMAN Vacuolar protein sorting-associated protein 13A OS=Homo sapiens GN=VPS13A PE=1 SV=2 (Range: 301-600)  ali follow..  15  244GLPDNSEKPRLLSSLDMSLFQITF---------EINPLDETVSQRCIIEAEPLEIIYDARTVNS............................................................................................................................................................................................................................................ 300
46 -9.520sp|Q7Z7G8|VP13B_HUMAN Vacuolar protein sorting-associated protein 13B OS=Homo sapiens GN=VPS13B PE=1 SV=2 (Range: 3301-3600)  ali follow..  1.......YPDCKTKDLLPSLLLRVEPLDEVTTEWSDAIDINSQGTQVVFLTGFGYVYVD------------VVHQCGTVFITVAPEGKAGPILTNTNRAPEKIVTFKMFITQLSLAV-HHKASAELLRLTLDNIFLCGAGPLPGEEPVAALFELYCVEICCGDLQLDNQLYNKSNFHFAVLVCEKCFIKLCITLNEGKSILCDINEFSF--ELKPARLYVEDTFVYYIKTLFDTYLPNSRLAGHSTHLSGGKQVLPMQVTQHARALVNP----------------VKLRLVIQPVNLLV. 297
47 -9.330sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1 (Range: 901-1200)  ali follow..  175..............EQESLIKLEYQFVSSECP---SMNLDSTLQVISLQVNNLDIILNPETIVELIGFLQKSFPKEKDDLSPQPLMTDFERSFREQGTYQSTNTEVAVEIHRLNLLLLRTVGNREKYGRKIATASIGG.................................................................................................................................................................. 300
48 -9.080sp|Q96BY7|ATG2B_HUMAN Autophagy-related protein 2 homolog B OS=Homo sapiens GN=ATG2B PE=1 SV=5 (Range: 601-900)  ali follow..  18FHSVPPHYTELLTFHSKE-LHYKHSENRGPQGNQARLSSVPHKAELQIKLNPVCCELDISIVDRLNSLLQPQKLATVEMMASHMYTSYNKHISLHKAFTEVANCRISVQVATPALNLPKKSLQKEILYLAFTDLEFKTEFIGGSTPEQI------KLELTFRELIGSFQEEKGDPSIKFFHVSSGVDGDTTSSDDF---------------DWPRIVLKINPPAMHSILERIAAEEEEENDGHYQEEEEGGAHSLKDVCDLRRPAPS................................. 299

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;