|
current user: public |
|
Query: gi|15644654|ref|NP_206823.1| lipid A 1-phosphatase (HP0021) [Helicobacter pylori 26695], from H.pylori |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 | |||||||
# | Score | Template | Links and tools | %id | First | MKKFLFKQKFCESLPKSFSKTLLALSLGLILLGIFAPFPKVPKQPSVPLMFHFTEHYARFIPTILSVAIPLIQRDAVGLFQVANASIATTLLTHTTKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLAVAFLMRRYSFKKYFWLLPLVPLTMLARIYLDMHTIGAVLTGLGVGMLCVSLFTSPKKP | Last |
1 | -34.400 | 4px7_A mol:protein length:262 Phosphatidylglycerophosphatase | ali model follow.. | 15 | 1 | .......GRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWVTETVTQPWGVITHLILFGWFLWCLRFRFAILAAAILVGQGVKSWIKDKVQEPRPF-AEEKNIPKETGFAFPSGHTMFAASAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQ. | 231 |
2 | -29.800 | 2ipb_A mol:protein length:230 Class A nonspecific acid phosphatase PhoN | ali model follow.. | 14 | 61 | ......................................................ENIARIFSPVVGAKINPKDTPETWNMLQNLLKMGGYYATASAKKYYMRTRPFVLFNHSTCRRKDGSYPSGHDAYSTLLALVL-SQARPERAQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEF......... | 193 |
3 | -27.900 | 2a96_A mol:protein length:250 class A nonspecific acid phosphatase PhoN | ali model follow.. | 13 | 90 | ...............................................................VVGAKISPKDTPETWNMLQNLLKVGGYYATASAKKYYMRTRPFVLFNHSTTLRKDGSYPSGHTAYSTLLALVLSQARPERAQ-ELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEF......... | 213 |
4 | -24.800 | 1d2t_A mol:protein length:231 ACID PHOSPHATASE | ali model follow.. | 16 | 82 | ...............................................................AFGSPITEKDAPALHKLLTNMIEDAGDLATRSAKDHYMRIRPFAFYGVSTCNSKNGSYPSGHTSIGWATALVLAEINPQRQN-EILKRGYELGQSRVICGYHWQSDVDAARVVGSAVV......... | 205 |
5 | -19.200 | 4cit_A mol:protein length:458 VANADIUM-DEPENDENT HALOPEROXIDASE | ali model follow.. | 16 | 310 | ................................................................................KASVAMADAFISCWDEKYRSNLIRPDDSWKPVLQTPPFPEYTSGHSVVSGAASVVLTEVFGDNFSFDDDTAADEAAISRMYGGIHYRAAIEVGVKQGRDLGTFVVNKLH. | 442 |
6 | -18.300 | 1idq_A mol:protein length:609 VANADIUM CHLOROPEROXIDASE | ali model follow.. | 15 | 337 | ................................................................................LVDVACTDAGIFSWKEKWEFEFWRPNTNDIPFKPP----AYPSGHATFGGAVFQMVRRYYNGRVHFDSAWELM-NAISRIFLGVHWRFDAAAARDILIPTTTKDVYAVD. | 520 |
7 | -17.700 | 1qhb_A mol:protein length:596 HALOPEROXIDASE | ali model follow.. | 15 | 480 | .......................................................................................................................SYGSGHAVVAGACVTILKAFFDANFQIDQVFLADNVAIGRNMAGVHYFSDQFESLLLG---EQIAIGILEE | 573 |
8 | -17.700 | 3w35_A mol:protein length:531 NapH1 | ali model follow.. | 13 | 359 | ...............................................................................LAHVLATFEPLIAAWHHKTRFDAVRPVTA-SSYLPVGDHPEYPSGSTSLCSATSQAARRYFD---HIPTWTFTRTCATSRVWGGVHFQTTVDRTIDFGEQFGDLAHEFVQ. | 522 |
9 | -17.500 | 1qi9_A mol:protein length:556 PROTEIN (VANADIUM BROMOPEROXIDASE) | ali model follow.. | 21 | 413 | .......................................................................................................................SYPSGHATQNGAFATVLKALIGLDRGGDCYPLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTL..... | 506 |
10 | -17.000 | 1up8_A mol:protein length:598 VANADIUM-DEPENDENT BROMOPEROXIDASE 1 | ali model follow.. | 15 | 482 | .......................................................................................................................SYGSGHAVVAGACVTILKAFFDSGIEIDQVFLADNIAIGRNMAGVHYFSDQFESLLLG---EQVAIGILEE | 575 |
11 | -13.100 | 5AA6 Entity 1(prereleased) | ali follow.. | 22 | 426 | .......................................................................................................................AYPSGHAINLGAYLTVLKAFLGFELGQRCFPVTSNVAIGRSHLGVHWRMDGVFGAEMG............. | 528 |
12 | -9.580 | 4v14_A mol:protein length:138 MUTATOR MUTT PROTEIN | ali model follow.. | 11 | 3 | ...........................................................................................RIHIVAGIIFNSDQSEIFITKRPDHLHKGFPGGKVEAGESREQAMVRELEEEIGITVTEQQAFQHFDFDYTDKSLSFDFFDGQPHG............. | 97 |
13 | -9.350 | 1mut_A mol:protein length:129 NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE | ali model follow.. | 12 | 1 | .................................................................................MKKLQIAVGIIRNENNEIFITRRAADAHM-----ANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWEGEPWG............. | 96 |
FFAS is supported by the NIH grant R01-GM087218-01
|
![]() ![]() ![]() ![]() ![]() ![]() |
Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013. Berman HM, Burley SK, Chiu W, Sali A, Adzhubei A, Bourne PE, Bryant SH,Dunbrack RL Jr, Fidelis K, Frank J, Godzik A, Henrick K, Joachimiak A, HeymannB, Jones D, Markley JL, Moult J, Montelione GT, Orengo C, Rossmann MG, Rost B,Saibil H, Schwede T, Standley DM, Westbrook JD. Outcome of a workshop on archiving structural models of biological macromolecules. Structure. 2006 Aug;14(8):1211-7. |