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Query: gi|15646197|ref|NP_206811.1| outer membrane protein (HP0009) [Helicobacter pylori 26695], from H.pylori

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MVKNTGELKKLSDTYENLSNLLTNFNNLNQAVTNASSPSEINATIDNLKANTQGLIGEKTNSPAYQAVYLALNAAVGLWNVIAYNVQCGPGKSGDQSVIFDGQPGHDSRSINCNLTGYNNGVSGPLSIDNFKTLNQAYQTIQQALKQDSGFPVLDSKGKQVTIKITTQTNGANKSETTTTTTTTNDAQTLLQEASKMISVLTTNCPWVNTAHNSNGGAPWNLNTTGNVCQVFATEFSAVTSMIKNAQEIVTQAQSLNNPQSNQNAPKDFNPYTSADRAFAQNMLNHAQAQAKMLELADQMKKDLNTIPKQFITNYLAACRNGGGTLPDAGVTSNTWGAGCAYVEETITALNNSLAHFGTQADQIKQSELLARTILDFRGSLKDLNNTYNSITTTASNTPNSPFLKNLISQSTNPNNPGGLQAVYQVNQSAYSQLLSATQELGHNPFRRVGLISSQTNNGAMNGIGVQIGYKQFFGEKRRWGLRYYGFFDYNHAYIKSSFFNSASDVFTYGVGTDVLYNFINDKATKNNKISFGVFGGIALAGTSWLNSQYVNLATFNNFYSAKMNVANFQFLFNLGLRMNLAKNKKKASDHVAQHGVELGVKIPTINTNYYSLLGTQLQYRRLYSVYLNYVFAYLast
1 -8.300sp|Q76KD6|SPERI_HUMAN Speriolin OS=Homo sapiens GN=SPATC1 PE=2 SV=2  ali follow..  3LLTNYEGLRH-NEELKKLVRLIRENHELKSAIKTQAGGLGISGFTSGLGEATAGLSSRQNNGVFLPPSPAVANERV---LEEVGIMALAPLAEMLTSLQPSATPGSLMSPLTGTLSTLLSGPAPTSQSSPLTSFLTSPIAGPLTGTLASSLGLPSTGTLTPSSLVAGPVAMSQSSPLIAPVMGTVAVSLSSPLLSSTATPPGVSQNLLANPMSNLVLPEAPRLRLAEPLRGGPTGPQSPACVVPTATTKVPLSTEPPQSTQDPEPLSMAFAGAPLQTSTPIGAMGTPAPKTAFSFNTSDTQAQPSAAQEQVVPASVPTSPTTSPTVTVLASAPALAPQVATSYTPSSTTHIAQGAPHPPSRMHNSPTQNLPVPHCPPHNAHSPPRTSSSPASVNDSRGPRTTEPSTKSMMEVERKLAHRKTSKFPENPRESKQLAWERLV--AFQLDRRILSSIFPERVRLYGFTVS--YVSVMNRLQSLG--------YN-GRVHPALTEQLVN--AYGI--DLLLSCLSQLAHDDGK----MFI--------W......................................................................................... 591
2 -8.140sp|Q04446|GLGB_HUMAN 1,4-alpha-glucan-branching enzyme OS=Homo sapiens GN=GBE1 PE=1 SV=2 (Range: 151-450)  ali follow..  14  50...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................YESHVGYKHFLPRIKGLGYNYYASFGYQITSFFAASSRQELVDTAHSMGIIVLLDVVHSHASKNSADGLNMFDG----------TDSCYFHSGPRGTHDLWDSRLF----AYS-SWEVLRFLLSNIRWLEEYRFD-GFRFDGVTSMLYHHHGVGQGFSGDYSEYFG..... 232
3 -6.610sp|Q8N1N0|CLC4F_HUMAN C-type lectin domain family 4 member F OS=Homo sapiens GN=CLEC4F PE=2 SV=2  ali follow..  12  92..HHFGREAEMRELIQTFKGHMENSSAWVVEIQMLKRVDNVNSQLQVLGDHLGNTNADIQMVKG--------------------------------------------------------------VLKDATTLSLQTQMLRSSLEGTNAEIQRLKEDLEKADALTFQTLNFLKSSLENTSIELHVLSRGLENANSEIQMLNASLETANTQAQLANSSLKNANAEIYVLRGHLDSVNDLRTQNQVLRNSLEGAN--AEIQGLKENLQNTNALNSQTQAFIKSSFDNTSAEIQFLRGHLERAGDEIHVLKRDLKMVTAQTQKANGRLDQTDTQIQVFKSEMENVNTLNAQIQVLNGHMKNASREIQTLKQGMKNASALTSQTQMLDSNLQKASAE----------------------IQRLRGDLENTKALTMEIQQEQSRLKTLHVVITSQEQLQRTQSQL----VLQGWKFNGGS-------YY--FS------SVKKSWHEAEQFCVSQGAHLASAFLVEFTSKVY-----YWIGLT-GSWRWTDGT..................................................................................... 544
4 -6.410sp|P19801|ABP1_HUMAN(removed signalp:1-19) Amiloride-sensitive amine oxidase [copper-containing] OS=Homo sapiens GN=ABP1 PE=1 SV=4 (Range: 151-450)  ali follow..  11  138..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GPRFRLGWSFAFRLRSSSGLQVL--VHFG-------------ERIAYEVSVEAVALYGGHTPAGMQTKYLDVGWGLGSVTHE-----------LAPGIDCPETATFLDTFH----------YYDADDPVHYPRALEMPTGVPLRRHNFYAGLKGQVLVLRTTSTVYNYDYIW 296
5 -6.280sp|Q3LI67|KRA63_HUMAN Keratin-associated protein 6-3 OS=Homo sapiens GN=KRTAP6-3 PE=2 SV=3  ali follow..  16  4....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................SYYRNYNGGHGYGCCGYGGLGCGYGGCGYGCCGYGGLGFGYG-GLDCGYGGLG---------GYGSFCGCGYRGLDCGYG--------YGYVSHSFCGCGYRCGSGYGSSFGY..................................................... 101
6 -6.200sp|Q8NFM4|ADCY4_HUMAN Adenylate cyclase type 4 OS=Homo sapiens GN=ADCY4 PE=1 SV=1 (Range: 301-600)  ali follow..  13  1.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LFGKFDQIAKEHKILGDCYYCV-----SGLPLSLPDHAINCVRMGLDMCRAIRKLRAATGVDINMRVGVHSGSVLCGDVWSHD----------TLANHMEAG--------GVRVHITGATLA----LLAGAYAVEDAGMEHRDPYLRELGEPTYL.............. 145
7 -6.040sp|Q9BX74|TM2D1_HUMAN(removed signalp:1-37) TM2 domain-containing protein 1 OS=Homo sapiens GN=TM2D1 PE=1 SV=1  ali follow..  14  90...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................LSLFLGW---------LGARFY--LGYPALGL--------LKFCTVGCGIDFILISMQIVGPSDGSSYIIDYYGLSITNETFRKTQ..................................................................................... 167
8 -6.000sp|Q3LI64|KRA61_HUMAN Keratin-associated protein 6-1 OS=Homo sapiens GN=KRTAP6-1 PE=2 SV=1  ali follow..  15  6.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................YGNYYG-TPGYGFCGYGGLGYGYGGLG----------CGYGSCCGCGFRRLGCGYGYGSRSLCGYGYGCGSGSGYYY........................................................................................ 71
9 -6.000sp|O60673|DPOLZ_HUMAN DNA polymerase zeta catalytic subunit OS=Homo sapiens GN=REV3L PE=1 SV=2 (Range: 1-300)  ali follow..  16  40............................................................................................................................................................................................................................................................................................................................................................................................................................................................................VFGA-TPAGQK----------LHLHGIFPYLYVPYDGYGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKV---------------------------SLVSGMPF-----YGYHEKERHF------------MKIYLYNPTMVKRICELLQSGAIMNKFYQPHIPYLLQL 163
10 -5.790sp|Q9BWH2|FUND2_HUMAN FUN14 domain-containing protein 2 OS=Homo sapiens GN=FUNDC2 PE=1 SV=2  ali follow..  14  88..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................FIGGVTGW--FIFQK--VGANHTGYIKVDWQRVEKDMKKAKEQLKIRKSNAEEVVSFVKKNVLVTGGFFGGFLLGMA............................................................................................... 188

FFAS is supported by the NIH grant R01-GM087218-01
1 1 0 2 4 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30.