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Query: gi|16128007|ref|NP_414554.1|(removed signal:1-23) conserved protein, UPF0412 family (yaaI b0013 exp) [Escherichia coli str. K-12 substr. MG1655], from E.coli

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst NDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVNSSDMATLKIIGDDLast
1 -5.670 VFG000856(gi:22001088) (agg3B) invasin protein [AAFs (VF0214)] [Escherichia coli 55989]  ali follow..  12  40RDGMKLATGRMTCRETHTGFHVWMNARQDGGRHYIVQNSKGIQHELRVRIGGNGWISSFGEAQRGIFRLGKEEQAIFDVIVDGDQKVIP-----GEYMLSISGECIVLGR. 146
2 -4.880 VFG000951(gi:21910837) (spea) streptococcal exotoxin A precursor - phage associated [Spes (VF0248)] [Streptococcus pyogenes MGAS315]  ali follow..  10  171...........................TAQELDYKVRKYLTDNKQLYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDSNTSQIEVYLTTK.............. 251
3 -4.760 VFG001809(gi:15927587) (tsst-1) toxic shock syndrome toxin-1 [TSST-1 (VF0022)] [Staphylococcus aureus subsp. aureus N315]  ali follow..  165...........................AISTLDFEIRHQLTQIHGLYWKITMNDGSTYQSDLSKKFEYNTEKPPIN-------IDEIKTIEAEIN................ 234
4 -4.450 VFG000980(gi:15674561) (spej) streptococcal exotoxin J precursor [Spes (VF0248)] [Streptococcus pyogenes M1 GAS]  ali follow..  12  151...........................TIQEFDFKIRQYLMQTYKIQLEIAINGNKHESFNLYDATSSSTRSDIFKKYKDNKNMKDFSHFDIYLWTK.............. 232
5 -4.330 VFG002072(gi:15595284) (hsiE1) type VI secretion system hcp secretion island protein HsiE1, interacting with HsiB1 to form a novel subcomplex of the T6SS [HSI-I (VF0334)] [Pseudomonas aeruginosa PAO1]  ali follow..  10  207............................WLPAELTLANGGATVALLPARYAETVEHGDD-----AARLGRKTEWLDS-GLPVGQRLLRELDF................... 276
6 -4.300 VFG000957(gi:19746213) (spel) streptococcal exotoxin L precursor [Spes (VF0248)] [Streptococcus pyogenes MGAS8232]  ali follow..  186...........................TFQEVDVRLRKSFMLNDEIKLYQYDSKVLSGNWEFHGSGEKEEGADLFKYPDYRYNNLIKSHIDVYLFTNKEN........... 262
7 -4.220 VFG001435(gi:145509) (cfaB) colonization factor antigen 1 [Adhesive fimbriae (VF0213)] [Escherichia coli str. E7473]  ali follow..  12  36.............................PAIDLLQADGNALPSAVKLAYSPASKTFESYRVMTQVHTNDATKKVIVK--------LADTPQLTDVLNSTVQMPISV.... 105
8 -4.160 VFG001331(gi:76787513) (bca) C protein alpha-antigen [  ali follow..  938...........................................HKVTVEVTYPDGTKDTVEVTVHVTPKPVPD...................................... 967
9 -4.080 VFG000110(gi:15641470) (ace) accessory cholera enterotoxin [Ace (VF0130)] [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  29.......................................ESKIFVIQFFWEMSQKVIDMFTIYPLIQQAIDMLPPQYSGFLFFLGLDQALAIVLQA............... 85
10 -4.000 VFG002424(gi:53722514) (bimA) YadA family of bacterial autotransporter mediating actin tail formation [BimA (VF0427)] [Burkholderia pseudomallei K96243]  ali follow..  327DDSTAVGAQAIAFSEQSIAIGSRAIAAGARSIAVGTDATAAAPDSVALGSGSIAEREGTVSV----------------GRDGHERQITHV-----ASGTEPTDAVNV.... 412

FFAS is supported by the NIH grant R01-GM087218-01
1 0 1 6 1 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.