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Query: gi|16128007|ref|NP_414554.1|(removed signal:1-23) conserved protein, UPF0412 family (yaaI b0013 exp) [Escherichia coli str. K-12 substr. MG1655], from E.coli

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst NDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVNSSDMATLKIIGDDLast
1 -6.270tr|C9J1H5|C9J1H5_HUMAN Uncharacterized protein OS=Homo sapiens GN=TCTN1 PE=4 SV=1 (Range: 328-483)  ali follow..  6..............................QPHKTGALPCQLVAQKVKSLLWGQGFPDYVAPFGNSQAQDMLDWVPIHFITQSFNRKHVIEVKWTKYGSLLNPQAKIVN.. 97
2 -5.710sp|Q6ZTI6|F101A_HUMAN Protein FAM101A OS=Homo sapiens GN=FAM101A PE=2 SV=3 (Range: 73-216)  ali follow..  21.............................ESIKVNPEPTHEIRCNSEVKYASEKHFQDKVFYAPVPTVTAYSETIVAAPNCTWRNYRSQLTLEPRPRALRFRSTTIIFPKH 102
3 -5.600sp|Q9H4D0|CSTN2_HUMAN Calsyntenin-2 OS=Homo sapiens GN=CLSTN2 PE=1 SV=2 (Range: 689-807)  ali follow..  11  5.......................................NLDFCDILVIGGDLDPRQECLELNHSLDATNSTAGYSIYGVGS-EQVLHHIRYRNWRPASLEARRFRI.... 81
4 -5.580sp|Q9BQT9|CSTN3_HUMAN Calsyntenin-3 OS=Homo sapiens GN=CLSTN3 PE=1 SV=1 (Range: 699-803)  ali follow..  1..................................DEIVHNLDGCEISLVGDDLDPERESLLLDTTLELTNTSAYLTIAGVTVYEEILRQARYRLRHGAALYTRKFRL.... 82
5 -5.560sp|Q8WZA1|PMGT1_HUMAN Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 OS=Homo sapiens GN=POMGNT1 PE=1 SV=2 (Range: 233-295)  ali follow..  14  3....................................................GDPVLLKTDVPLSSAEEAECHWADTELNRRRRRFCSKVEGYGSVCSCKDPTPIEF.... 57
6 -5.480sp|Q8N5W9|F101B_HUMAN Protein FAM101B OS=Homo sapiens GN=FAM101B PE=1 SV=1 (Range: 80-214)  ali follow..  13.............................EGVEFDPLPPKEVRYTSLVKYDSERHFIDDVQLPLGLAVASCSQTVTCVPNGTWRNYKAEVRFEPRHRPTRFLSTTIVYPKY 94
7 -5.440sp|O94985|CSTN1_HUMAN Calsyntenin-1 OS=Homo sapiens GN=CLSTN1 PE=1 SV=1 (Range: 711-815)  ali follow..  11  1..................................EEIVHDLDTCEVTVEGEELNHEQESLEVDMAIEVSSSELGMTFTGVASYEEVLHLLRYRNWHARSLLDRKFKLICSE 86
8 -4.770sp|A5PLN9|CE044_HUMAN UPF0533 protein C5orf44 OS=Homo sapiens GN=C5orf44 PE=2 SV=2 (Range: 299-357)  ali follow..  11  5............................YGDVRLSLEAIPDTVEPFHITCKITNCSERTMDLVLEMCNTNSIHWCGISGR............................... 59
9 -4.590sp|Q5T4S7|UBR4_HUMAN E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens GN=UBR4 PE=1 SV=1 (Range: 2288-2432)  ali follow..  47.............................GGFTIEISNNNSTMVMTGMRIQIGTQAIERAPSYIEI-NLSRSRWFDFPTREEALQADKKLNLFIGASVDPAGVAVKIYGKT 139
10 -4.390sp|Q96RL7|VP13A_HUMAN Vacuolar protein sorting-associated protein 13A OS=Homo sapiens GN=VPS13A PE=1 SV=2 (Range: 1050-1181)  ali follow..  16  1...............................ITLQIL---AELSCLQIFIQDQKCNISEIKI-----EGLDSEMIMRPSETEINAKLRNIIVLDSDITAIYKKAVYITGKE 72

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.