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Query: IDP00019 gene: pykA-2; pyruvate kinase BA_4843 [Bacillus anthracis str. Ames], from CSGID

Results of FFAS03 search in PDB0516
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRKTKIVCTIGPASESIEKLEQLIEAGMNVARLNFSHGSHEEHGARIKNIREASKKTGKTVGILLDTKGPEIRTHDFVDGQAELVTGAEVVLSTEQVLGTAEKFSVSYAGLYDDVDPGSRILIDDGLIELEVIEKADGNIRTKVLNSGTVKNKKGVNVPNVSIKLPGITEKDVKDIIFGIEQKVDFIAASFVRKAADVLEIRELLEEHNAQYIQIVPKIENQEGIDNIDSILEVSDGLMVARGDMGVEIPPEEVPLVQKRLIKKCNVLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGQYPVEAVTMMANIAVRVEKSLQYEDMFKKRIKEFTPTITDAISQSVAHTALALDVAAIVAPTESGYTAKMISKYRPKSPIVAVTSDEQVGRRLALVWGVQAFMAEKRAASTDEMLDTAIQTGMDAGLIGLGDTVVITAGVPVAETGTTNLMKIHVVGEEVAKGQGIGRKAAKGKVVVAKTAAEAVANVNEGDILVTTSTDKDMIPAIEKAAALVVEEGGLTSHAAVVGVSIGIPVIVGVNGVTATLKNGQEVTVDAARGIVYNGHAEVLLast
1 -165.0002e28_A mol:protein length:587 Pyruvate kinase  ali model follow..  69  2KRKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTGRTVAILLDTKGPEIRTHNMENGAIELKEGSKLVISMSEVLGTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDAGEIVTTVLNGGVLKNKKGVNVPGVKVNLPGITEKDRADILFGIRQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAADGLMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAAGQYPVEAVKTMHQIALRTEQALEHRDILSQRTKESQTTITDAIGQSVAHTALNLDVAAIVTPTVSGKTPQMVAKYRPKAPIIAVTSNEAVSRRLALVWGVYTKEAPH-VNTTDEMLDVAVDAAVRSGLVKHGDLVVITAGVPVGETGSTNLMKVHVISDLLAKGQGIGRKSAFGKAVVAKTAEEARQKMVDGGILVTVSTDADMMPAIEKAAAIITEEGGLTSHAAVVGLSLGIPVIVGVENATTLFKDGQEITVDGGFGAVYRGHASVL 587
2 -161.0003t05_A mol:protein length:606 Pyruvate kinase  ali model follow..  60  16MRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMNEVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDKKEVKCDILNSGELKNKKGVNLPGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVRRPSDVLEIREILEEQKA-NISVFPKIENQEGIDNIEEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKG-RKSTDALLNNAVATAVETGRVTNGDLIIITAGVPTGETGTTNMMKIHLVGDEIANGQGIGRGSVVGTTLVAETVKDLEGKDLSDKVIVTNSIDETFVPYVEKALGLITEENGITSPSAIVGLEKGIPTVVGVEKAVKNISNNVLVTIDAAQGKIFEGYANVL 600
3 -135.0001e0t_A mol:protein length:470 PYRUVATE KINASE  ali model follow..  50  1MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNVSLKAGQTFTFTTKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNR--KLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKE-ITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVP-SGTTNTASVHVL................................................................................................................. 470
4 -134.0003khd_A mol:protein length:520 Pyruvate kinase  ali model follow..  44  39SKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKEMFNNVLKAQERPNCLLGMLLDTKGPEIRTGFLKNKEVHLKEGSKLKLVTDEFLGDETCIACSYKKLPQSVKPGNIILIADGSVSCKVLETHEDHVITEVLNSAVIGERKNMNLPNVKVDLPIISEKDKNDILFAIPMGCNFIAASFIQSADDVRLIRNLLGPRG-RHIKIIPKIENIEGIIHFDKILAESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGETAGGKFPVEAVTIMSKICLEAEACIDYKLLYQSLVNAIEISVQEAVARSAVETAESIQASLIIALTETGYTARLIAKYKPSCTILALSASDSTVKCLNVHRGVTCIKVGSF-QGTDIVIRNAIEIAKQRNMAKVGDSVIAIHGIKEEVSGGTNLMKVVQI................................................................................................................. 513
5 -133.0004krz_A mol:protein length:519 Pyruvate kinase  ali model follow..  43  33HRANRIVCTIGPSTQSVEALKGLIRSGMSVARMNFSHGSHEYHQTTINNLRAAATELGAHIGLALDTKGPEIRTGLFKDGGIALAPGDTVLVTSDEKIGTKEKFYIEYPRLSITVRPGGFIYIDDGVLSLKVLSKEDETLKCYVNNAHFLTDRKGCNLPGCEVDLPAVSEKDREDLKFGVEQGIDMVFASFIRTAEQVQEVREALGEKGK-DILIISKIENHQGVQNIDGIIEASDGIMVARGDLGVEIPAEKVVVAQMILISKCNVAGKPVICATQMLESMTTNPRPTRAEVSDVANAVFNGADCVMLSGETAKGKYPNEVVQYMARICLEAQSATNQAVMFNSIKKMQKMSPEEAVCSSAVNSVYEVRAKALLVLSNSGRSARLASKYRPDCPIICATTRMRTCRQLTITRSVDAVFYDAEDENKEKRVQLGVDCAKKKGYVVPGDLMVVVHADHKV-KGYPNQTRIIYVS................................................................................................................ 513
6 -132.0003e0v_A mol:protein length:539 Pyruvate kinase  ali model follow..  43  47YRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELGVNIAIALDTKGPEIRTGQFVGGDAVMERGATCYVTTDPAKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHEDEQLECTVTNSHTISDRRGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGR-DIMIICKIENHQGVQNIDSIIEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGETAKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHMSADEAVCSSAVNSVYETKAKAMVVLSNTGRSARLVAKYRPNCPIVCVTTRLQTCRQLNITQGVESVFFDADDWGKEHRVAAGVEFAKSKGYVQTGDYCVVIHA-DHKVKGYANQTRILLV................................................................................................................. 526
7 -131.0004hyv_A mol:protein length:499 Pyruvate kinase 1  ali model follow..  42  19HRANRIVCTIGPSTQSVEALKNLMKSGMSVARMNFSHGSHEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGEVSFAPGDIVCVTTDEKVGTKEKFYIDYPQLTNAVRPGGSIYVDDGVMTLRVVSKEDRTLKCHVNNHHRLTDRRGINLPGCEVDLPAVSEKDRKDLEFGVAQGVDMIFASFIRTAEQVREVRAALGEKGK-DILIISKIENHQGVQNIDSIIEASNGIMVARGDLGVEIPAEKVCVAQMCIISKCNVVGKPVICATQMLESMTSNPRPTRAEVSDVANAVLNGADCVMLSGETAKGKYPNEVVQYMARICVEAQSATHDTVMFNSIKNLQKMCPEEAVCSSAVASAFEVQAKAMLVLSNTGRSARLISKYRPNCPIICVTTRLQTCRQLNVTRSVVSVFYDAADKDKEKRVKLGLDFAKKEKYASTGDVVVVVHADHSV-KGYPNQTRLIYL................................................................................................................. 498
8 -129.0003eoe_A mol:protein length:511 Pyruvate kinase  ali model follow..  44  29AHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAKQRPEARLAILLDTKGPEIRTGFLKDHKITLQQGATLKIVTDNLIGDETTIACSYGALPQSVKPGNTILIADGSLSVKVVEVGSDYVITQAQNTATIGERKNMNLPNVKVQLPVIGEKDKHDILFGIPMGCNFIAASFVQSADDVRYIRGLLGPRG-RHIRIIPKIENVEGLVNFDEILAEADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETANGEFPVITVETMARICYEAETCVDYPALYRAMCLAVPISTQEAVARAAVETAECVNAAIILALTETGQTARLIAKYRPMQPILALSASESTIKHLQVIRGVTTMQVPSF-QGTDHVIRNAIVVAKERELVTEGESIVAVHGMKEEVAGSSNLLKVLTV................................................................................................................. 504
9 -129.0001a3w_A mol:protein length:500 PYRUVATE KINASE  ali model follow..  41  18LRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEEYPGRPLAIALDTKGPEIRTGTTTNDDYPIPPNHEMIFTTDDKYCDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQVLEVDDKTLKVKALNAGKICSHKGVNLPGTDVDLPALSEKDKEDLRFGVKNGVHMVFASFIRTANDVLTIREVLGEQGK-DVKIIVKIENQQGVNNFDEILKVTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDNCTPKPTSTTETVAASAVAAVFEQKAKAIIVLSTSGTTPRLVSKYRPNCPIILVTRCPRAARFSHLYRGVFPFVFEKETDDVEARINFGIEKAKEFGILKKGDTYVSIQGFKAG-AGHSNTLQVSTV................................................................................................................. 500
10 -127.0001pkn_A mol:protein length:530 PYRUVATE KINASE  ali model follow..  44  41ARNTGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFARPVAVALDTKGPEIRTGLIKGSEVELKKGATLKITLDNAYCDENILWLDYKNICKVVEVGSKVYVDDGLISLQVKQKGPDFLVTEVENGGFLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVDEDVDMVFASFIRKAADVHEVRKILGEKG-KNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMIIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAMFHRKLFEERSSSHSTDLMEAMAMGSVEASYKCLAAALIVLTESGRSAHQVARYRPRAPIIAVTRNHQTARQAHLYRGIFPVVCKDPAEDVDLRVNLAMNVGKAAGFFKKGDVVIVLTGWRPG-SGFTNTMRVVPV................................................................................................................. 529
11 -127.0001pkm_A mol:protein length:530 M1 PYRUVATE KINASE  ali model follow..  44  41ARNTGIICTIGPASRSVEILKEMIKSGMNVARLNFSHGTHEYHAETIKNVRAATESFARPVAVALDTKGPEIRTGLIKGSEVELKKGATLKITLDNAKCDENVLWLDYKNICKVVEVGSKVYVDDGLISLLVKEKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKG-KNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAMFHRKLFEERGSSHSTDLMEAMAMGSVEASYKCLAAALIVLTESGRSAHQVARYRPRAPIIAVTRNHQTARQAHLYRGIFPVVCKDPAEDVDLRVNLAMNVGKARGFFKHGDVVIVLTGWRPG-SGFTNTMRVVPV................................................................................................................. 529
12 -126.0004ima_A mol:protein length:543 Pyruvate kinase  ali model follow..  45  54ARSTSIIATIGPASRSVERLKEMIKAGMNIARLNFSHGSHEYHAESIANVREAVESFYRPVAIALDTKGPEIRTGILQGGEVELVKGSQVLVTVDPTRGNANTVWVDYPNIVRVVPVGGRIYIDDGLISLVVQKIGPEGLVTQVENGGVLGSRKGVNLPGAQVDLPGLSEQDVRDLRFGVEHGVDIVFASFVRKASDVAAVRAALGPEG-HGIKIISKIENHEGVKRFDEILEVSDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNLAGKPVVCATQMLESMITKARPTRAETSDVANAVLDGADCIMLSGETAKGNFPVEAVKMQHAIAREAEAAVYHRQLFEERAAPLSRDPTEVTAIGAVEAAFKCMAAAIIVLTTTGRSAQLLSRYRPRAAVIAVTRSAQAARQVHLCRGVFPLLYREPADDVDRRVQFGIESGKLRGFLRVGDLVIVVTGWRPG-SGYTNIMRVLSIS................................................................................................................ 543
13 -126.0003n25_A mol:protein length:531 Pyruvate kinase isozymes M1/M2  ali model follow..  44  42ARNTGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFARPVAVALDTKGPEIRTGLIKGSEVELKKGATLKITLDNAKCDENILWLDYKNICKVVDVGSKVYVDDGLISLQVKQKGPDFLVTEVENGGFLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKAADVHEVRKILGEKG-KNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMIIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAMFHRKLFEERASSQSTDLMEAMAMGSVEASYKCLAAALIVLTESGRSAHQVARYRPRAPIIAVTRNHQTARQAHLYRGIFPVVCKDPAEDVDLRVNLAMNVGKARGFFKKGDVVIVLTGWRPG-SGFTNTMRVVPV................................................................................................................. 530
14 -126.0004jpg_A mol:protein length:556 Pyruvate kinase isozymes M1/M2  ali model follow..  44  61ARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFARPVAVALDTKGPEIRTGLIKGSEVELKKGATLKITLDNAKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKG-KNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEERLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPG-SGFTNTMRVVPV................................................................................................................. 549
15 -125.0003srd_A mol:protein length:551 Pyruvate kinase isozymes M1/M2  ali model follow..  44  56ARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFARPVAVALDTKGPEIRTGLIKGSEVELKKGATLKITLDNAKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKG-KNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEERLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPG-SGFTNTMRVVPV................................................................................................................. 544
16 -125.0003srf_C mol:protein length:551 Pyruvate kinase isozymes M1/M2  ali model follow..  44  56ARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFARPVAVALDTKGPEIRTGLIKGSEVELKKGATLKITLDNAKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKG-KNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAMFHRKLFEERASSHSTDLMEAMAMGSVEASYKCLAAALIVLTESGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPG-SGFTNTMRVVPV................................................................................................................. 544
17 -123.0001t5a_A mol:protein length:567 Pyruvate kinase, M2 isozyme  ali model follow..  44  72ARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFARPVAVALDTKGPEIRTGLIKGSEVELKKGATLKITLDNAKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKG-KNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQNLIAREAEAAIYHLQLFEERLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPG-SGFTNTMRVVPV................................................................................................................. 560
18 -123.0004drs_A mol:protein length:526 Pyruvate kinase  ali model follow..  44  43QRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAKARPHSTVGIMLDTKGPEIRTGMLEGGKIELKAGQTLKITTDSMLGNSECISCSYSLLPKSVQIGSTVLIADGSLSTQVLEIGDDFIVCKVLNSVTIGERKNMNLPGCKVHLPIIGDKDRHDIVFALKYNLDFIALSFVQNGADVQLCRQIISENTPSSIKIISKIENLEGVINFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDCVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHSSVPVAVPEAIACSAVESAHDVNAKLIITITETGNTARLISKYRPSQTIIACTAKPEVARGLKIARGVKTYVLNSI-HHSEVVISNALALAKEESLIESGDFAIAVHGVKESCPGSCNLMKIVRC................................................................................................................. 525
19 -123.0003ma8_A mol:protein length:534 Pyruvate kinase  ali model follow..  44  45QRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAKARPHSTVGIMLDTKGPEIRTGMLEGGKIELKAGQTLKITTDSMLGNSECISCSYSLLPKSVQIGSTVLIADGSLSTQVLEIGDDFIVCKVLNSVTIGERKNMNLPGCKVHLPIIGDKDRHDIVFALKYNLDFIALSFVQNGADVQLCRQIISENTPSSIKIISKIENLEGVINFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDCVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHSSVPVAVPEAIACSAVESAHDVNAKLIITITETGNTARLISKYRPSQTIIACTAKPEVARGLKIARGVKTYVLNSI-HHSEVVISNALALAKEESLIESGDFAIAVHGVKESCPGSCNLMKIVRC................................................................................................................. 527
20 -117.0003qtg_A mol:protein length:461 Pyruvate kinase  ali model follow..  27  14RNLTKRVATLGPSTDVLRPDELIFLDLVDGVRINLAHASPNEVKFRIEAVRSYEKAKNRPLAVIVDLKGPSIRVGST--SPINVQEGEVVKFKLSD-KSDGTYIPVPNKAFFSAVEQNDVILMLDGRLRLKVTNTGSDWIEAVAESSGVITGGKAIVVEGKDYDISTPAEEDVEALKAPIRDNIDYVAISLAKSCKDVDSVRSLLTELGF-QSQVAVKIETKGAVNNLEELVQCSDYVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLTNETASGKYPLAAVSWLSRILMNVEYQIPQSPLLQ--------NSRDRFAKGLVELAQDLGA-NILVFSMSGTLARRIAKFRPRGVVYVGTPNVRVARSLSIVWALEPLYIPA--ENYEEGLEKLIS-------LKGTTPFVATYGIR----GGVHSVKVKL.................................................................................................................. 461
21 -17.3002ols_A mol:protein length:794 Phosphoenolpyruvate synthase  ali model follow..  22  16............................................................................................................................................................DVERVGGKNASLGEMISQLTEKGVRVPGGFATTAFLAHNGLSERISAALAKLDVEDVAELARV-----------------GKEIRQWILDTPFPEQLDAEIEAAWNKMVADAGGADISVA------------SSATAEDLPDASFAGQQETFLN---------INGLDNVKEAMHHVFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRDSGASGVMFTTESGYVVFVTSSYGLGENVVAVNPDEFYVFKPTLKAGKPAILRKTMGSKHIKMINVDVPEEDRNRFSITDEEITELAGRPMGLDGKLYILQINGDKTVLCEGRAIGQKVGQGKVRLIKDASE-MDSVEAGDVLVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLKNGQEVTVEGDTGFIYAGLLD.. 469
22 -15.8001vp8_A mol:protein length:201 hypothetical protein AF0103  ali model follow..  11  15...........................................................................................................................................................................................................................................................................................................................................................NKPGRENTEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVEEELRKRGAKIVR------QSHILSGLERSISRKLGGVSRTEAIAEALRSLFGH-GLKVCVEITIMAAVAVGGRSRGADTA---VVIRPAHMNNFFDAEIKEIICMPRNKR.................................................................... 195
23 -15.4005hv1_A mol:protein length:883 Phosphoenolpyruvate synthase  ali model follow..  15  128............SSATAEDLPHASFAGQHDTYLN------------IIGKDALLQHISMCWASLFTERAIIYRIQNFDHRKVQLAEASGILFTADPITSNRKSLSID--GLGEALVSGDSYTVRENTI----KIIATKKLAIYSLKEG---GTETRILEKSQQTKQTLTDQQIIQLAFGKPQDIEWCLAEYIVQSRPITTLYPIPEVNEPGN-RVYISVAHQQMMTDAMKPLGLSATMYTAGGRLFVDITQSLSAKVSRDMMVNSLGQSDPLISGSDLFDFIVEDPNNITSQMGDVADVIRPYPAVRAYLEQTKNPDFPLTLIPLILSNIKNFDSSASMHAQGEKEAFHKEQEILRRLQELPDGEQKAMETKEKIDILRHFIGYREYPKYGMINRYFIYKLALLRAGEQLVKDGILQEHEDIYFLYFEELREVVRTGQVDYELINA-PRILTSDGEMI-----NGEYKRENLPKDAILGLPVSSGTVEGRARVILEMEKA--DLEDGDILVTAYTDPSWTPAFVSIKGLVTEVGGLMTHGAVIAREYGLPAVVGVENATTIIKDGQQIRINGTEGYI........ 873
24 -11.1002x0s_A mol:protein length:913 PYRUVATE PHOSPHATE DIKINASE  ali model follow..  14  4...........................................KKWVYYFGGGNADGNKNMKELLGGKGANLA----EMVNLGIPVPPGFTITTEACKTYQETETIP-QEVADQVRENVSRV--EKEMGAKFGDPANPLLFS-------VRSGAAASMPGMMDTV-GLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADI--VMQVGREDFEEALSRMKERRGT-KFDTDLTASD--ELFELKTGCSFPQDPVMQLRATIYRRMNNITGLLGTAVNVQAMVFGNINDRSA--TGVAFSRSPSTGENFFFGENAQGEDVVAGIRTPQQINHSLSLRWAKAHGVGEEERRKRYPSMEEAMPENYRLLCDV--------------RKRLENHYRDMQDLEFTVQDGRLWLLQCRNG---------KRTIHAAVRIAIDMVNEGLISREEAVLRIDPYQVDHLMHPNLEPGAEKANKPIGRGLAASPGAAVGQVVFDAESAKEWSGRGKKVIMVRLETSPEDLAGMDAACGILTARGGMTSHAAVVARGMGKCCVSGCGDMVSVFREGDYITIDGSKGLIYAGKLKLR 539
25 -10.5001vbg_A mol:protein length:876 pyruvate,orthophosphate dikinase  ali model follow..  16  3...........................................KKRVFHFGKGKSEGNKTMKELLGGKGANLA----EMASIGLSVPPGFTVSTEACQQYQDAGCALPAGLWAEIVDGLQWV--EEYMGATLGDPQRPLLLS-------VRSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGERFAYDSFRRFLDMFGNV--VMDIPRSLFEEKLEHMKESKGL-KNDTDLTASD--EVYLSAKGEPFPSDPKKQLRAKKYRSINQITGLRGTAVNVQCMVFGNMGNTSG--TGVLFTRNPNTGEKKLYGENAQGEDVVAGIRTPEDLDAMKNLMPQAYDELVENCNILESHYKE---MQDIEFTVQENRLWMLQCRTGKRTGKSAVKIAVDMVNEGLVEPRSAIKMV-------------EPGHLDQLLHPQFENPSAYK------------------------------DQVIATGLPASPGAAVGQVVFTAEDAEAWHSQGKAAILVRAETSPEDVGGMHAAVGILTERGGMTSHAAVVARGWGKCCVSGCSGIRHVLREGEWLSLNGSTGEVILGKQPLS 516
26 -10.3001dik_A mol:protein length:874 PYRUVATE PHOSPHATE DIKINASE  ali model follow..  17  9......................................................EEGNASMRNLLGGKGCNLA----EMTILGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWL--EELNGKKFGDTEDPLLVS-------VRSAARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDFIQMYSDV-----VMEVPKSHFEKIIDAMKEEKGV-HFDTDLTADD--VYKEAMNGEEFPQEPKDQLRAIVYRRMNDIPGDWGTAVNVQTMVFGNKGETSG--TGVAFTRNPSTGEKGIYGENAQGEDVVAGVRTPQPITQLENDMPDCYKQFMDLAMKLEKHFRD---MQDMEFTIEEGKLYFLQTRNGKRTAPAALQIACDLVDEGMITEEEAVVRI-------------EAKSLDQLLHPTFNPAALKA------------------------------GEVIGSALPASPGAAAGKVYFTADEAKAAHEKGERVILVRLETSPEDIEGMHAAEGILTVRGGMTSHAAVVARGMGTCCVSGCGEIKHTFAEGDYISLDGSTGKIYKGDIETQ 513

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;