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Query: IDP00011 alcohol dehydrogenase, iron-containing BA_2222 [Bacillus anthracis str. Ames], from CSGID

Results of FFAS03 search in PDB0516
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPKSVLYGRNSLEKLWEQSKKFGKRAFIVTDTIMEDLGYVERCIQQLNTKGITVITYNKVNAEPTNIHVLEALTICKEGKCDFIIGLGGGSCIDAAKAVAVLYTNGGEVEDYVQKDREIDNDPLPLIAIPTTSGTGSEVTSVAVITNKRTDVKMMMKHPSFTPQVAIIDPILTRSVPPHITAATGIDALCHAVEAYISKVSQSLTDVLALSAIESIMKYLRIAYEDGENMEAREAMMIASLQAGIAFSNASVTLVHGMSRPVGALFHVPHGISNAILLPTVLEYTKGSAVKRLAEIGRCLNKDLYSYCDEEVADYTLGEIKKLCFDLHIPNLKEYGIGELEFEKAISKMASDAIESGSPANNPRVPSYDEIKQLYRECFHYKYEDSIKTLGDLast
1 -99.6003owo_A mol:protein length:383 Alcohol dehydrogenase 2  ali model follow..  39  8IPFVNEMGEGSLEKAIKDLNGSGKNALIVSDAFMNKSGVVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSPHDCAKAIALVATNGGEVKDYEGIDK-SKKPALPLMSINTTAGTASEMTRFCIITDEVRHVKMAIVDRHVTPMVSVNDPLLMVGMPKGLTAATGMDALTHAFEAYSSTAATPITDACALKAASMIAKNLKTACDNGKDMPAREAMAYAQFLAGMAFNNASLGYVHAMAHQLGGYYNLPHGVCNAVLLPHVLAYNASVVAGRLKDVGVAMGLDIANLGDKEGAEATIQAVRDLAASIGIPNLTELGAKKED----VPLLADHALKDACALTNPRQGDQKEVEELFLSAF............. 383
2 -99.3003bfj_A mol:protein length:387 1,3-propanediol oxidoreductase  ali model follow..  35  10VPNVNFFGPNAISVVGERCQLLGKKALLVTDKGLIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGIET-LTNPLPPIVAVNTTAGTASEVTRHCVLTNTETKVKFVIVSWRNLPSVSINDPLLMIGKPAALTAATGMDALTHAVEAYISKDANPVTDAAAMQAIRLIARNLRQAVALGSNLQAREYMAYASLLAGMAFNNANLGYVHAMAHQLGGLYDMPHGVANAVLLPHVARYNLIANPEKFADIAELMGENITGLSTLDAAEKAIAAITRLSMDIGIPHLRDLGVKETD----FPYMAEMALKDGNAFSNPRKGNEQEIAAIFRQAF............. 387
3 -99.0004fr2_A mol:protein length:401 1,3-propanediol dehydrogenase  ali model follow..  33  15MPSVNFFGPGVISKIGERAKMLGKKPVIVTDKFLLKNGAVAQTLASLKKSGVDYVVYNGVEPNPKIHNIKEVKTLYEKEDADSIITVGGGSAHDTGKGAGIIMTNGDDITKLAGIET-LKNPLPPLIAVNTTAGTGSELTRHAVITNEETHLKFVVVSWRNIPLVSFNDPTLMLDIPKGLTAATGMDAFVQAVEPYVSVDHNPITDSQCIQAIKLIESSLREAVANGHNLQARTKMVEAEMLAGMAFNNANLGYVHAMAHQLGGQYDAPHGVCCALLLPYAEEYNLIADPERFAELARIMGENTDGLSTRDAAELSIKAMKQLSEDVGIPSIKDIGAKPED----FDLMAENALKDGNAFSNPRKGTKEDIVKIFQEAYDAK.......... 395
4 -97.1002bi4_A mol:protein length:392 LACTALDEHYDE REDUCTASE  ali model follow..  32  11LNETAWFGRGAVGALTDEVKRRGQKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAIGIISNNPADVRSLEGLSP-TNKPSVPILAIPTTAGTAAEVTINYVITDEEKRRKFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGSVAG--DKDAGEEMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTGEKYRDIARVMGVKVEGMSLEEARNAAVEAVFALNRDVGIPHLRDVGVRKED----IPALAQAALDDVCTGGNPREATLEDIVELYHTAW............. 386
5 -96.7005br4_A mol:protein length:391 Lactaldehyde reductase  ali model follow..  32  8LNETAWFGRGAVGALTDEVKRRGQKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAIGIISNNPADVRSLEGLSP-TNKPSVPILAIPTTAGTAAEVTINYVITDEEKRRKFVCVDPHDIPQVAFIDADMMDGCPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGSVAG--DKDAGEEMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTGEKYRDIARVMGVKVEGMSLEEARNAAVEAVFALNRDVGIPHLRDVGVRKED----IPALAQAALDDVCTGGNPREATLEDIVELYHTAWL............ 384
6 -91.3001o2d_A mol:protein length:371 Alcohol dehydrogenase, iron-containing  ali model follow..  30  12MPTDVFFGEKILEKRGNIIDLLGKRALVVTKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRNDSFDFVVGLGGGSPMDFAKAVAVLLKEKDLSVEDLYDREKVKHW-LPVVEIPTTAGTGSEVTPYSILTDPEGNKRGCTL---MFPVYAFLDPRYTYSMSDELTLSTGVDALSHAVEGYLSRKSTPPSDALAIEAMKIIHRNLPKAIEG--NREARKKMFVASCLAGMVIAQTGTTLAHALGYPLTTEKGIKHGKATGMVLPFVMEVMKEEIPEKVDTVNHIFG----------------GSLLKFLKELGLY--EKVAVSSEE----LEKWVEKGSRAKHLKNTPGTFTPEKIRNIYREALG............ 364
7 -90.6001vhd_A mol:protein length:371 alcohol dehydrogenase, iron-containing  ali model follow..  31  8MPTDVFFGEKILEKRGNIIDLLGKRALVVTKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRNDSFDFVVGLGGGSPMDFAKAVAVLLKEKDSVEDLYDREKV--KHWLPVVEIPTTAGTGSEVTPYSILTDPEGNKRGCTL---MFPVYAFLDPRYTYSMSDELTLSTGVDALSHAVEGYLSRKSTPPSDALAIEAMKIIHRNLPKAIEG--NREARKKMFVASCLAGMVIAQTGTTLAHALGYPLTTEKGIKHGKATGMVLPFVMEVMKEEIPEKVDTVNHIFG----------------GSLLKFLKELGLY--EKVAVSSEE----LEKWVEKGSRAKHLKNTPGTFTPEKIRNIYREALGVEGGS....... 365
8 -87.1003rf7_A mol:protein length:375 Iron-containing alcohol dehydrogenase  ali model follow..  22  21CVPKMIFGRGSFVQLDTVLEQERDFVVFLVDDVHQHKPLAAR----VPNKAHDLVIYVNVDDEPTTVQVDELTAQVKAFNTKLVVGLGGGSTMDLAKAVSLMLTNPGSSSEYQGWDL-IKNPAVHHIGIPTVSGTGAEASRTAVLCGPVR--KLGLNSDYTVFDQIIMDSELIAGVPTDQWFYTGMDCFIHCVESLQGTYLNEFAKAFAEKSMDLC-----REVYLDDHPEKDDKLMMASYMGGMSIAYSQVGACHAVSYGLGYVLGYHHGIGNCLAFDVLEEFYPEGV-AEFRKMMEIHNITLPKNICKDLPDETIAKMVAVTKSMGPDNVYGKGWEEKV----TDEMLTKLFRR.................................... 368
9 -80.6003zdr_A mol:protein length:433 ALCOHOL DEHYDROGENASE DOMAIN OF THE BIFUNCTIO  ali model follow..  37  23VPPKIYFEKNAVQYLAKMPDI--SRAFIVTDPGMVKLGYVDKVLYYLRRRPVHSEIFSEVEPDPSIETVMKGVDMMRSFEPDVIIALGGGSPMDAAKAMWLFYEHPALKQKFLDIRKRVYKQKAKFVAIPTTSGTGSEVTSFAVITDKKTNIKYPLADYELTPDVAIVDPQFVMTVPKHVTADTGMDVLTHAIEAYVSNMANDYTDGLAMKAIQLVFEYLPRAYQNGADELAREKMHNASTIAGMAFANAFLGINHSLAHKLGAEFHIPHGRANTILMPHVIRYNAAKADQRYAEIARMLGLP--ARTTEEGVESLVQAIIKLAKQLDMPSIEACGVSKQEFESKVEKLAELAFEDQCTTANPKLPLVSDLVHIYRQAFKG........... 426
10 -75.0003iv7_A mol:protein length:364 Alcohol dehydrogenase IV  ali model follow..  23  13LPQKVMFGYGKSSALKQEVERRGAKVMVIAGE--REMSIAHKVASEIEVAI----WHDEVVMHVPIEVAERARAVATDNEIDLLVCVGGGSTIGLAKAIAMTTA-------------------LPIVAIPTTYA-GSEATNVWGLTEAAR--KTTGVDLKVLPETVIYDSELTMSLPVEMSVASGLNGLAHCIDSLWGPNADPINAVLAAEGIRALNQGLPKIVANPHSIEGRDEALYGAYLAAVSFASAGSGLHHKICHTLGGTFNLPHAQTHATVLPYVLAFNAGDAPEAERRAAAAFG-----------TDTALEGLQRLRLSVNAPRLSDYGFEASG----IAEAVDVTLEKV-PANNPRPVTRENLSRLLEAALNGEDPAVLSAVLS 363
11 -75.0003hl0_A mol:protein length:353 Maleylacetate reductase  ali model follow..  23  11APARIVFSAGSSADVAEEIRRLGSRALVLSTPQQK--GDAEALASRL--GRLAAGVFSEAAMHTPVEVTKTAVEAYRAAGADCVVSLGGGSTTGLGKAIALRT-------------------DAAQIVIPTTY-AGSEVT--PILGQTENGVKTTMRGPEILPEVVIYDAELTLGLPVAISMTSGLNAMAHAAEALYARDRNPIASMMAVEGLRAMIEALPVVRQAPHDIGARETALYGAWLCGTVLGAVGMSLHHKLCHTLGGSLDLPHAETHAVLLPHTIAYVEEAAPNLLAPLAALVGGR------------AGAGLFDFAARLGAPSLAALGVGADD----LDPMAELATAN--PYWCPRPIEKTAIRDLLQRAFEGA.......... 350
12 -74.1003jzd_A mol:protein length:358 Iron-containing alcohol dehydrogenase  ali model follow..  23  13HAARVVFGAGSSSQVAAEVERLGKRALVLCTP--NQQAEAERIADLL--GPLSAGVYAGAVMHVPIESARDATARAREAGADCAVAVGGGSTTGLGKAIAL-------------------ETGMPIVAIPTTY-AGSEVTPVYGLTEA--GTKRTGRDPRVLPRTVIYDPALTVGLPRGLSVTSALNAIAHAAEGLYARDANPVMSLMAEEGIRALAAGIPAVFNDPADLDARSQCLYGAWLCGTVLGGVGMALHHKLCHTLGGSFNLPHAETHTIVLPHALAYNAAAVPEAMARIRRATGAGEQS---------AAATLFDLAQRHGAPALRDIGMREED----LDRAADIALAS--PYWNPRPIEREPIRALLQAAYEGV.......... 355
13 -73.2003w5s_A mol:protein length:371 Maleylacetate reductase  ali model follow..  23  23APARIVFGTGSSVGVAEEIRRLGSRALVLSTPHQK--GDAEALAARL--GPLAAGVFSDAAMHTPVEVTKRAVEAYRAAGADCVVSLGGGSTTGLGKAIALRT-------------------DAPQIVIPTTY-AGSEVT--PILGQTENGVKTTLRGPEILPEVVIYDAELTLGLPVGISMTSGLNAMAHAAEALYARDRNPIASMMAVEGLRAMIEALPGVRMEPQDTKARETALYGAWLCGTVLGAVGMSLHHKLCHTLGGSLDLPHAETHAVLLPYTIAYVEQAVPDQLAPLAALVGGR------------AGTGLYDFAARLGAPSLAALGVGGED----LDAMAELATAN--PYWCPRPVEKTAIRALLQRAFEGA.......... 362
14 -54.7001vlj_A mol:protein length:407 NADH-dependent butanol dehydrogenase  ali model follow..  24  15.PTKIVFGRGTIPKIGEEIKNAGIRKVLFLGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGGSVVDSAKAVAAGALYEGDIWDAF-IGKYQIEKALPIFDVLTISATGTEMNGNAVITNEKTKEKYGVSSKALYPKVSIIDPSVQFTLPKEQTVYGAVDAISHILEYYFDGSSPEISNEIAEGTIRTIMKMTERLIEKPDDYEARANLAWSATIALNGTMAVGRRACHRIEHSLSALYDIAHGAGLAIVFPAWMKYVYRKNPAQFERFAKKI-----EGEGEELILKGIEAFKNWLKKVGAPSLKDAGIPEEDIDKIVDNVMLLVEKNLKPKGASMVLEREDVREILKLAAK............ 401
15 -47.5001oj7_A mol:protein length:408 HYPOTHETICAL OXIDOREDUCTASE YQHD  ali model follow..  21  24.PTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKTGVLDQVLDALK--GMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTKFIAAAAPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTTGDKQAFHSAHVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPVDKIHDRFAEGILLTLIEDGPKALKEPENYDVRANVMWAATQALNGLIGAGV-ATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRDTKRAKLLQYAERV--NITEGSDDERIDAAIAATRNFFEQLGVPTLSDYGLDGSSIPALLKKLEEHGMTQ----GENHDITLDVSRRIYEAA.............. 401
16 -47.4004qgs_A mol:protein length:398 Alcohol dehydrogenase YqhD  ali model follow..  21  14.PTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKTGVLDQVLDALK--GMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTKFIAAAAPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTTGDKQAFHSAHVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPVDKIQDRFAEGILLTLIEDGPKALKEPENYDVRANVMWAATQAENGLIGAGV-ATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRDTKRAKLLQYAERV--NITEGSDDERIDAAIAATRNFFEQLGVPTLSDYGLDGSSIPALLKKLEEHGMTQ----GENHDITLDVSRRIYEAA.............. 391
17 -29.7001jpu_A mol:protein length:370 glycerol dehydrogenase  ali model follow..  20  10.PAKYVQGKNVITKIANYLEGIGNKTVVIADEIVWKI-AGHTIVNELKKGNIAAE-EVVFSGEASRNEVERIANIARKAEAAIVIGVGGGKTLDTAKAVA-------------------DELDAYIVIVPTAASTDAPTSALSVIYSDDGVFESYRFYKK--PDLVLVDTKIIANAPPRLLASGIADALATWVEARSVIKSGGKTTIAAEAIAEKCEQTLYESVKAKVVTPALEAVVEANLLSGLGFESGGLAAAHAIHNGFGEIHHLTHGVAFGTLVQLALE---------------------------EHSQQEIERYIELYLCLDLPTLEDIKLKDAS-REDILKVAKAATAEGETIHNAFNVTADDVADAIFAA.............. 357
18 -29.0001kq3_A mol:protein length:376 glycerol dehydrogenase  ali model follow..  19  14.PGRYVQGAGAINILEEELSRFGERAFVVIDDFVDKNVLGENFFSSFTKVRVNKQIFGGECSDEEIERLSG----LVEEETDVVVGIGGGKTLDTAKAVA-------------------YKLKKPVVIVPTIASTDAPCSALSVIYTPNGEFKRYLFLPR--PDVVLVDTEIVAKAPARFLVAGMGDALATWFEAESCKQKYAPNSMTAYALARLCYETLKRSVEEKSVTPALEKIVEANLLSGLGFESGGLAAAHAIHNGLTVLHKYLHGVAIGVLASLFLT---------------------------DKPRKMIEEVYSFCEEVGLPTLAEIGLDGVSDEDLMKVAEKACDKNETIHNEPQPVTSKDVFFALKAA.............. 359
19 -28.8004mca_A mol:protein length:367 Glycerol dehydrogenase  ali model follow..  20  8.PGKYIQGANALAAVGQYAKSLADHYLVIADDFVMKL-AGDTLMGSLQQHGVKHH-AALFNGECCHKEIDRLGRELKAHGCRGVIGVGGGKTLDTAKAIA-------------------HYQQLPVVLIPTIASTDAPTSALSVIYTEQGEFAEYLIYPR--PDMVVMDVAIIAKAPVRLLVAGMGDALSTYFEAQACFDAQATSTLAALSLARLCYDTLKLAVEAGVVTEAVERIIEANYLSGIGFESSGLAAAHAIHNGFTVLHHLYHGVAFGTLAQLVLQ---------------------------NSPMAQIETVLAFCHRIGLPTLAEMGVSGDAVEKIMAVAQASCAAGETIHNMPFKVTPAGVQAAILTA.............. 355
20 -28.1003uhj_A mol:protein length:387 Probable glycerol dehydrogenase  ali model follow..  18  25.PNKYIQRAGEIDKLAAYLAPLGKRALVLIDRVLFDALSERIGKSCGDSLDIRFERFGG---ECCTSEIERVRKVAIEHGSDILVGVGGGKTADTAKIVA-------------------IDTGARIVIAPTIASTDAPCSAIAVRYTEHGVYEEALRLPR--PDAVVVDSALVAAAPARFLVAGIGDALSTWFEARSNIESRTDNTEAGMAIARHCQDVLKIAVEAGLLTPAVENIIEANLLSGLGFENCGCSAAHGIHDGLTVLHGYFHGVAFGTLCLLMLE---------------------------NRDRAEIEAMIRFCRSVGLPKLADLGIVDDVPAKIGRVAEAACRPGNIIYATPVTITVPAVRDAILAL.............. 373
21 -26.7001ta9_A mol:protein length:450 glycerol dehydrogenase  ali model follow..  20  69.PQKYVQGRHAFTRSYMYVKKWATKAVVLADQNVWNI-CANKIVDSLSQNGMTVT-KLVFGGEASLVELDK-LRKQCPDDTQVIIGVGGGKTMDSAKYIA-------------------HSMNLPSIICPTTASSDAATSSLSVIYTPDGQFQKYSFYPL--PNLIFIDTDVIVRAPVRFLISGIGDALSTWVETESVIRSNSTSSIAGRYIARACKDTLILSNTRGVCTEAFENVVEANLMSGLGFENGGLAAAHAIHNGMGPVHRLMHGVAYGTLVQVVLE---------------------------DWPLEDFNNLASFMAKCHLPTLEELGIPNVTDEELLMVGRATLRPDESIHNMSKKFNPSQIADAIKAV.............. 417
22 -24.6003ce9_A mol:protein length:354 Glycerol dehydrogenase  ali model follow..  17  11IPLILEVGNNKIYNIGQIIKKGNKRVSLYFGEGIYEL-FGETIEKSIKSSNIEIEAVE-TVKNIDFDEIGT-NAFKIPAEVDALIGIGGGKAIDAVKYMAFLRK-------------------LPFISVPTSTSNDGFSSPVASLLINGKRTSVPAK----TPDGIVVDIDVIKGSPEKFIYSGIGDLVSNITALYDWKFEEENHKSIIDDFAVMISKKSVNSFVRTDFKSIKDEVFLKELVDSLTMNGIAMEIAGNSSPASGAEHLISHAL------------------DKFLPNPQLHGVGVATYIMSKVHKHREERIKKILSDTGFFYVKGLNMKKSDFKRAISE............................................ 318
23 -22.5004rgq_A mol:protein length:368 Glycerol-1-phosphate dehydrogenase  ali model follow..  18  32TPRYTIIEDGAINKIEEILKKLNKNPLVITGKNTKKY-CRFFYDIVYYDEILN----------------NLEIELKKYTAYDCVIGIGGGRSIDTGKYLAYKLG-------------------IPFISVPTTASNDGIASPIVSIRQPSFMVD--------APIAIIADTEIIKKSPRRLLSAGMGDIVSNITAVLDWKLAYKEKSESSAIFSKTIAKELISYVLNSDLSEYHNKLVKALVGSGIAISRPASGSEHLFSHALDKLKNSLHGCGIGTIMMSYLH------------------------KENKKLSGLHEKIKMSLKKVDAPTAKELGFDEDIIIEALTMAHK......................................... 335
24 -22.1004rfl_A mol:protein length:371 Glycerol-1-phosphate dehydrogenase [NAD(P)+]  ali model follow..  18  35TPRYTIIEDGAINKIEEILKKLNKNPLVITGKNTKKY-CRFFYDIVYYDEILN----------------NLEIELKKYTAYDCVIGIGGGRSIDTGKYLAYKLG-------------------IPFISVPTTASNDGIASPIVSIRQPSFMVD--------APIAIIADTEIIKKSPRRLLSAGMGDIVSNITAVLDWKLAYKEKSESSAIFSKTIAKELISYVLNSDLSEYHNKLVKALVGSGIAISRPASGSEHLFSHALDKLKNSLHGCGIGTIMMSYLH------------------------KENKKLSGLHEKIKMSLKKVDAPTAKELGFDEDIIIEALTMAHK......................................... 338
25 -15.9001xag_A mol:protein length:354 3-dehydroquinate synthase  ali model follow..  13  14....IYVEHGAIKYIGTYLNQ-FDQSFLLIDEYVNQY-FANKFDDILSYENVHKVIIPAGEKTKTFEQYQETLEYILSHHVTAIIAVGGG------------------TGDFAGFVAATLLRGVHFIQVPTTILAHDSSVGGKVGINSKQGKNLI--GAFYRPTAVIYDLDFLKTLPFKQILSGYAEVYKHALESATQDIEQHFKDREILQSLNGMDKYIAKGIETKLDIVVADEKEQGV--------RKFLNLGHTFGHAVEYYHKIPHGHAVMVGIIYQFIVASKHDISHYIQYLIQLGYPLTDLDFETLYQYMLSDKKNDKQGVQMVLMRQFGVDQLTLQHACEQLKT......................................... 351
26 -12.7004p53_A mol:protein length:420 Cyclase  ali model follow..  14  38....VVVQPRLLDPANPALADAPARRLIVIDATVRSL-YGEQLAAYLAGHDVEFHVIDAHESAKVMETVFEVVDAMDAFGVPPVLAMGGG------------------LTDIVGLAASLYRRATPYVRIPTTAGIGAK-------TGVNFREHKNRLGTYHPSSLTLIDPGFLATLDARHLRNGLAEILKVALASLVEQRMQPGEGGTGGAALTVLRRAVQGMLENLWEHQLRRLVDFGHSFSPSVEMAALPELLHGEA--------VCIDMALSSVLAHHRGLLTEAELGRVLDVMRLLHLPVPVCTPDLMRAALADTVKHRDGWQHMPLPRGIGVTQREIEAALLTLAERD....................................... 398
27 -12.1002d2x_A mol:protein length:368 2-deoxy-scyllo-inosose synthase  ali model follow..  10  15....FAFGEHVLESVESYIPRDFDQYIMISDSGVPDSIVHYAAEYFGKLAPVHILRFQGGEEYKTLSTVTNLQERAIALGANAIVAVGGG------------------TGNVAGVAAGMMFRGIALIHVPTTAASDSVLSIKQAVNLTSGK----LVGFYYPPRFVFADTRILSESPPRQVKAGMCELVKNMLENDNKEFTEDDLNSANVYSPKQLETFINFCISAKMSVLSEDIYEKKK--------GLIFEYGHTIGHAIAEQGGITHGEAIAVGMIYA------------AKIANRMNL---------MPEHDVSAHYWLLNKIGALQDIPLKSDPDSIFHYL.............................................. 317
28 -11.8003qbd_A mol:protein length:368 3-dehydroquinate synthase  ali model follow..  17  17.PYPVVIGTGLLDELEDLLAD-RHKVAVVHQPGLAET--AEEIRKRLAGKGVDAHRIEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGGGAATDVAGFAAATWLRG-----------------VSIVHLPTTAAVGGK-------TGINTDAGKNLVGAFHQPLAVLVDLATLQTLPRDEMICGMAEVVKAGIEADPQAALDPAGDVLPELIRRAITVKAEVVAADEKESELREILNYGHTLGHAIERRERYRWRHGAAVSVGLVF---------------------------AELARLAG----------LDDATAQRHRTILSSLGLPVLEIMAGDKKTRAGVLRFVVLDGLAKPGRMVGPDPGLLVTAYA................... 357
29 -10.8003clh_A mol:protein length:343 3-dehydroquinate synthase  ali model follow..  12  26......................KQKALIISDSIVAGL-HLPYLLERLKALEVRVCVIESGEKYKNFHSLERILNNAFEMQLNLMIALGGG------------------ISDMVGFASSIYFRGIDFINIPTTLLAQVDASV----TGINTPYGKNLIGSFHQPKAVYMDLAFLKTLEKREFQA----GVAEIIKMAVCFDKNLVERLETKDLKDCLEEVIFQSVNIKAQVVVQDEKEQNI-----AGLNYGHTFGHAIEKETD-YERFLHGEAIAIGMRMA------------NDLALSLGM---------LTLKEYERIENLLKKFDLIFYERLFLDKKSENKTIKFILPKGVGAFEVASHIPKETIIKVLEKWH................ 343
30 -10.6001ujn_A mol:protein length:348 dehydroquinate synthase  ali model follow..  16  14....ILVGEGVLKEVPP----LAGPAALLFDRRVEGF-AQEVAKALGVRHLLGLPGGEAAKSLEVYGKVLSWLAEKGLPRNATLLVVGGGTLTDLGGFVAATYLRG-----------------VAYLAFPTTASVGGK-------TGINLPEGKNLVGAFHFPQGVYAELRALKTLPLPTFKEGLVEAFKHGL----------IAGDEALLKVERLEAFLARAVAVKVRVTEEDPLEKGK-----RLLNLGHTLGHALEAQTR--HALPHGMAVAYGLLYA------------ALLGRALG-----------GEDLLPPVRRLLLWLSPPPLPYLLRDKKKVSESLHWVVPLAPGRLVVRPLPEGLLREAFAAWREEL.............. 341
31 -10.6005hvn_A mol:protein length:362 3-dehydroquinate synthase  ali model follow..  13  20....IIVDSVLDFSHILEYVT-NKQVLVVTNTTVAKLYLTKFLAALVDDLDVRTCILEDGEQYKSQQSLDKILSTLLENHFTVLVALGGG------------------IGDITGFAAAIYQRGIDFIQIPTTLLSQVDSSV----TAINHQLGKNMIGAFYQPKVVYTSIEFYKTLPQREYIAGMAEVVKYAISKDFYLWLDSNRDKILAKDSVTLIEMVKRSCQIKAQVVAMDEKELTGARAIL---NFGHTFGHAIEKCQN-YRGLKHG--EAVGVGMAQA----------IDFSHYLG----------ISQQQAKDFNDFIVSFGISIDFPNDICQKEFLEAM.............................................. 322
32 -10.5003zok_A mol:protein length:378 3-DEHYDROQUINATE SYNTHASE  ali model follow..  14  28....IYIGSGLLDQPDLLQRHVGKRVLVVTNSTVAPI-YLDKVVGALTNENPNVSVESVILPDDTLMKVFDKAIESRLDRRCTFVALGGG------------------IGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSV----TGINHRLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVVKYGLDANFFEWQEKNMPALMARDPSALAYAIKRSCENKAEVVSLDEKESGL-----ATLNLGHTFGHAIETGFG------HG--EAVAAGMVMA----------VDMSYRLG----------IDESIVNRAHNILQQAKLPTAPPETMTVEMFKSVM.............................................. 334
33 -10.2003okf_A mol:protein length:390 3-dehydroquinate synthase  ali model follow..  16  38....ISIGAGLFANPALLSLSAKQKVVIVTNHTVAPL-YAPAIISLLDHIGHALLELPDGEQYKTLETFNTVMSFLLEHNYSVVIALGGG------------------IGDLVGFAAACYQRGVDFIQIPTTSQVDSSVGGKTAVNHPLGK----MIGAFYQPKAVVIDTDCLTTLPAREFAAGMAEVIKYGIDSAFFDWLEAQMEALYALDEQALTYAIARCCQIKAEVVAQDEKESGI-----ALLNLGHTFGHAIEAHMG------HG--EAVSAGTVMA----------AKTAQLQG----------IDASQFERILAILKKAHLPVRTPENMTFADFMQHM.............................................. 341
34 -9.9005eks_A mol:protein length:368 3-dehydroquinate synthase  ali model follow..  17  17....IFIGSQLDPKQLLEPYIHGQQVMIVSNVTVAPL-YLSHYQEALESLGKTVATCEKYKDIQHLNLIFDALLEAGFNRDCTVLALGGG------------------IGDMAGFASACFQRGVYFVQVPTTLLSQVDSSV----TGINHPLGKNMLGAFQQPQVVLADMAQLNTLPERELSAGLAEVIKYALDEDFLVWLEENMDGLVARDADLLAEAVYRSCAHKARIVANDEKEQGE-----ALLNLGHTFGHAIESYLG----VATGMVMAADLSQRLGWISNEDVARTKKIIQRANLPISQIPLDDFLGYMAHDKKVLNGQLRLVLLKQLG........................................................ 339

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;