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Query: [G] COG4282 Protein involved in beta-1,3-glucan synthesis, from COG0312

Results of FFAS03 search in COG0312
Master-slave alignment does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSKNSFSSMANSVTSFFQSLTTPNRHADPSFRPSRREKQSRLPTPLQSVAASAYSGVNASQTGLLNDSRANSVTNLPNSSNTSQVGLNNISPAPVGYVPGSKTNELANNSMEMQEISPNGSASLPPPVSESWRRIDRWAEENYYELYCQLCYGATVADVDSLEYELECTLPRDVRESLYIHDGQDRGGQPTGILFGVTLLDIEEIEEESELWRRVAQSYAEATLAGKIDQAVASRQASFPPGAVQCVYAHPGWIPLAKDFVGNNIAIDLAPGPAGQWGQVILFGRDQDTKYVVARSWADFLAIVAYDMENGKWLVDEDDNSLRLIYGPPREQWSYLDILKYRARKAERRKFKKRDGKRTTRPIPKSIAKEDVTNSANSTAPSTGTTVLDDGLDNNYEDIPLYGPSKDEELIKKEELEADTDLGLINTSEINQPANLPDEPTAETSNPVSATTVEAVTTTADNKDEEKNDHVTEDVSQNSTIAEASSLQAQEEEKEIETTSVKQELast
1 -152.000[G] COG4282 Protein involved in beta-1,3-glucan synthesis  ali  100  1MSKNSFSSMANSVTSFFQSLTTPNRHADPSFRPSRREKQSRLPTPLQSVAASAYSGVNASQTGLLNDSRANSVTNLPNSSNTSQVGLNNISPAPVGYVPGSKTNELANNSMEMQEISPNGSASLPPPVSESWRRIDRWAEENYYELYCQLCYGATVADVDSLEYELECTLPRDVRESLYIHDGQDRGGQPTGILFGVTLLDIEEIEEESELWRRVAQSYAEATLAGKIDQAVASRQASFPPGAVQCVYAHPGWIPLAKDFVGNNIAIDLAPGPAGQWGQVILFGRDQDTKYVVARSWADFLAIVAYDMENGKWLVDEDDNSLRLIYGPPREQWSYLDILKYRARKAERRKFKKRDGKRTTRPIPKSIAKEDVTNSANSTAPSTGTTVLDDGLDNNYEDIPLYGPSKDEELIKKEELEADTDLGLINTSEINQPANLPDEPTAETSNPVSATTVEAVTTTADNKDEEKNDHVTEDVSQNSTIAEASSLQAQEEEKEIETTSVKQE 504
2 -18.700[Z] KOG3756 Pinin (desmosome-associated protein)  ali follow..  10  553...................................................................................................................................................................................................................................................................................................................................................KSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKRR 717
3 -14.100[P] KOG4408 Putative Mg2+ and Co2+ transporter CorD  ali follow..  10  66.................................................................................................EEKTQKNQCWKSLFIDTYSDVGRYIDHYAAIKKAWDDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPDDYRCSYRIHNGQKLVVPGSNHYRSEDLLDVDTAAGGFQQRQGLKYCLPLT----------------------------------FCIHTGLSQYIAVEAAEGRNKNEVFYQCPDQIDMFIIGATFTDWFTSYVKNVVSGGFPIIRDQIFRYVHDPECVATTGDITVSVSTSFLPELSSVHPPHEMSKDALPEKACQLDSRYWRITNAKGDVEEVQGPGVVGEFPIISPGRVYEYTSCTTFSTTSGYMEGYYTFHFLYFKDKIFNVAIPRFHMACPTFRVSIA.................................................. 411
4 -13.800[A] KOG4849 mRNA cleavage factor I subunit/CPSF subunit  ali follow..  8  531...................................................................................................................................................................................................................................................................................................................................................SHRSRQRRERSTSRYRERSRERERDRDRERERDGGRSVRPRKSPEPVVAEAAEAPSSKRYYEDRERYRSSDRERRDRDRDRDRERERDRDRHFTNDGRGLPLDPSNFTSQNPGNIKTGRPKSAAVAGGSMEKPRGQSAWDIIDTDAHWIIKQQTTSIPAPPSSQQ 695
5 -13.800[S] KOG4051 Uncharacterized conserved protein  ali follow..  6  240...................................................................................................................................................................................................................................................................................................................................................PVRKSQRLKRSKEVKFEDEEKEEIEEDNTKDEEQKEKKEEIQEPKITHNEEVDKEKNENEEGDDEREKSTSYENTNGSESEGVDEGVDEELGYESEREAEGKGKQIESEGGNLKKKTENKKGDDQQDDTKKDSKDKNEPLAKRTRHSSSTGNTSNETSPKRKRRK 404
6 -13.800[S] KOG4851 Uncharacterized conserved protein  ali follow..  7  2........................................................................................................................................................................................................................................................................................................................................................KKFYQNADHETDKSKSAETKKRKNMRRLGGGGLSLQTFANMKSENNRYNPSLIKKQKEFYKNAKYVSKFRKSLKQQNIPDKNETGETSKVGDDDDDDKRKGKSNKRIGVEDLYKQTREEMERVRKEREAMFQAKKEAKEEAESRRKEAKGKMLRKTRHGQ 161
7 -13.500[S] KOG4791 Uncharacterized conserved protein  ali follow..  10  520...................................................................................................................................................................................................................................................................................................................................................EKKLQEGNEVDFLSRVRMEATEASVETTGVDITKIQVKRCEIMRETRMQKQQEREKSVLTPLQGDVASCNTQVAEKPVLTAVPGITWHLTKQLPTKSSQKVEVETSGIADSLLNVKWSAQTLEKRGEAKPTVNVKQSVVKVVSSPKLAPKRKAVEMHPAVTAAVK 684
8 -13.500[S] KOG4829 Uncharacterized conserved protein  ali follow..  9  1..................................................................................................................................................................................................................................................................................................................................................MARTELEKKVKRQGKKRKHEVTKNPEHAASDDEVANKSLILAPQVDQQEVPTDKPAKRRHKESEVSATKKQSRKNQAEEQVATSGSDESLPQKPQKRKQVQDANETKKLKRSKTQENNSDEDDDVDSQPTAAQLKEAARPENAYAVVTVRQKKKQKHQQRLEAQKS 166
9 -13.000[L] KOG0981 DNA topoisomerase I  ali follow..  7  2.....................................................................................................................................................................................................................................................................................................................................................SSSDSDSVSLSIRRRQRRGSSKRISMKESDEESDSSENHPLSESLNKKSKSESDEDDIPIRKRRASSKKNMSNSSSKKRAKVMGNGGLKNGKKTAVVKEEEDFNEIAKPSPKHKRVSKANGSKNGAKSAVKKEESDTDDSVPLRAVSTVSLTPYKSELPSGAS 164
10 -13.000[M] COG3064 Membrane protein involved in colicin uptake  ali follow..  8  66...................................................................................................................................................................................................................................................................................................................................................RQQDQQASARRAEEERKKLQQQQAEELQQKQAAEQERLKQLEKERLAAQEQQKQAEEAAKLAQQQQQQAEEAAKAAADAKKKAEAEAAKAAADAKKKAEAEAVKAAADAKKKAEAEAAKAAADAKKKAEAEAAKAAAEAKKKAEAEAAKAAAEAKKKADAEAAKA 230
11 -12.900[A] KOG4676 Splicing factor, arginine/serine-rich  ali follow..  7  320...................................................................................................................................................................................................................................................................................................................................................KKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQVTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDMDMSD 484
12 -12.900[S] KOG4691 Uncharacterized conserved protein  ali follow..  9  39...............................................................................................................................................................................................................................................................................................................................................................PVAKSKMFRVPERKKQSEEERTELMRLHNQYKTQLRSVRQFLREEVVRHEETSTADHIVLTPEQEEAEFQKCLDANAAWNAAIAKERDQRLAKKREEKVAYIQERLEAQQLREEERKEQANQRVLLEIERSKNYITRENLDAAIETALANPVD 191
13 -12.600[D] COG3115 Cell division protein  ali follow..  7  28...................................................................................................................................................................................................................................................................................................................................................SRKERSSMFRDRPLKRMKSKRDDDSYDEDVEDDEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPPYASAQPRQPVQQPPEAQVPPQHVPRPAQPVQQPAYQPQPEQPLQQPVSPQVAPAPQPVHSAPQPAQQAFQPAEPVAAPQPEPVAEPAPVMDKPKRKE 192
14 -12.500[BD] KOG4563 Cell cycle-regulated histone H1-binding protein  ali follow..  11  151...................................................................................................................................................................................................................................................................................................................................................MGEKEEAKKTEDKSLAKPETDKEQDSEMEKGGREDMDISKSAEEPQEKVDLTLDWLTETSEEAKGGAAPEGPNEAEVTSGKPEQEVPDAEEEKSVSGTDVQEECREKGGQEKQGEVIVSIEEKPKEVSEEQPVVTLEKQGTAVEVEAESLDPTVKPVDVGGDEPE 315
15 -12.400[R] KOG3175 Protein phosphatase 4 regulatory subunit 2 related protein  ali follow..  12  262............................................................................................................................................................................................................................................................................................................................................................QTTSSEISSVMVGETEASSSSQDKDKDSRCTRQHCTEEDEEEDEEEEEESFMTSREMIPERKNQEKESDDALTVNEETSEENNQMEESDVSQAEKDLLHSEGSENEGPVSSSSSDCRETEELVGSNSSKTGEILSESSMENDDEATEVTDEPMEQD 417
16 -12.400[Z] KOG4462 WASP-interacting protein VRP1/WIP, contains WH2 domain  ali follow..  7  84..............................................................................................................................................................................................................................................................................................................................................................TSSNNTQQAEERPSMPALGGLFAGGMPKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPK 237
17 -12.300[S] KOG4356 Uncharacterized conserved protein  ali follow..  3  541....................................................................................................................................................................................................................................................................................................................................................QYHVKSKGKVNAKKDNAPLDVKFERNQEGHALKVTIRPGTKEEEEDKENQDQEPESDQQQQQQVQNKKPGKKQRKKNKKERSLSESACADMILQEPLAKTNELQPRATFKLPPQRKQRSYSECNDSTGRSHRGILKRFSRYGPRPSMSDSWSSIDDSSSYSCSV 704
18 -12.000[R] KOG2295 C2H2 Zn-finger protein  ali follow..  10  279...................................................................................................................................................................................................................................................................................................................................................KDPVVYERKAEQMQSVKEVEKTINSPKEEMSEADPVSTQRKPVRPVNSDGENWDDDDAENSAPKKELAEDSKDSDSKPEDKQLNKKKTKKRKRNSSDDDSSSSESSSSSDEEKLKEKYDVEDGLRAEQKTEAEKDRQEATKAKQGPQSPKLDEDEGNENTEPKGL 443
19 -12.000[Y] KOG2992 Nucleolar GTPase/ATPase p130  ali follow..  13  126.............................................................................................................................................................................................................................................................................................................................................................VGKKAKSSSEDSSSEEEAPKKAAPVKAPPAKAAPAKKVESSSEDSSSEEEPAKPAVKATTTKVAPAKKADSSSEESSSDEETKPAAKPVAKAAPAKKAASSSEESDSDDEPAAKKPAVQPAAKPAPKAAASSSEDSSSEEEVKPAAKSAAKLAPA 280
20 -11.900[S] KOG2673 Uncharacterized conserved protein, contains PSP domain  ali follow..  10  535...................................................................................................................................................................................................................................................................................................................................................ERSKEVQGSSTSKSAKPKVIKVYSFADVVTTTKKGNIQTEESSLNHEKKLGTVVDIIEPMKCDERSKEVQGSSTSKSAKLKVIKVYSFADVVTTTKKGNIQTEESSLNHEKKLGTVVDIVEPMKCDERSKEVQGSSTSKSEKPKDVVTTTKKGNIQTEESSLNHE 707
21 -11.700[A] KOG0150 Spliceosomal protein FBP21  ali follow..  9  175.......................................................................................................................................................................................................................................................................................................................................................KPPKEGYLSYEEYERINQLAIDQQQISQAEESLKFRANVDEEVARVNREKMKAFRRTDNPKEKKQKEERRQTFKTEEEAATKEIGQWQTVEVKAPEQPIDWQLPKTDYYSAAPVVSASSEPEPPVKKFKEKTIGGLDEEIAATAPATFKRKFIRKGNSRQR 335
22 -11.700[MOU] KOG2629 Peroxisomal membrane anchor protein (peroxin)  ali follow..  8  298.............................................................................................................................................................................................................................................................................................................................................................MPPNPNQPLSDPRIAPKSKPWDYGQAPQDESSNGQWWQQKNPRSTDFGYETTTAARFTANQNETSTMEPAAFQRQRSWVPPQPPPVAMAEAVEAIRRPKPQAKIDQEAAASDGQSGVSDELQKITKFSESGGDGSGGIKIAEIQEETEQQHISQE 452
23 -11.600[TV] KOG3966 p53-mediated apoptosis protein EI24/PIG8  ali follow..  2  349.......................................................................................................................................................................................................................................................................................................................................................................GGNPWSKANRLSAMQRQQYELQQRQRLLQRDEQLLKQRKQQYVQQQRLQQEQLMRRDRSHSRSQTPQLGHPHRYAQAPVFDAGRVRDSSASSTHSSNAPSINSHRPPPYYGSSLRGAAPLVPTPVPGAPRAPLTPPVIRQESGPD 493
24 -11.600[K] KOG4134 DNA-dependent RNA polymerase I  ali follow..  6  210.....................................................................................................................................................................................................................................................................................................................................................................................VSEEVTENGTEEAAKKPKKKKKKKDPETYEVDSGTTKLADDADDTPMEESALQNTNNANGIWEEEPKKKKKKKKHQEVQDQDPVFQGSDSSGYQSDHKKKKKKRKHSEEAEFTPPLKCSPKRKGKSN.... 336
25 -11.400[R] KOG2897 DNA-binding protein YL1 and related proteins  ali follow..  7  36..............................................................................................................................................................................................................................................................................................................................................................QEDEEDKEYEQKDEEEDVVDSDFSIDENDEPVSDQEEAPEKKRKRGVVNTKAYKETKPAVKKETKATPALHKKRPGGGVTKRRPRPRFTVLDSGRKSIRTSTAIKTQATKIRLKELDDARKRKKKKVRVEDYMPTQEELLEEAKITEEENTKS. 188
26 -11.200[A] KOG1295 Nonsense-mediated decay protein Upf3  ali follow..  9  108...................................................................................................................................................................................................................................................................................................................................................KKEKRREEARRRNEEKRKQREEQKLLRLAAQSDASKLKEAEGGGGGGDTKKPAKKDVKDPQSSGSQANDAKASRSKRRTERDQRRREEHEQRKLVKRDKKKDDGQGKQDKQDKQDKGKPSSGKQNKNSKSMDIVILKKANKPESNESLDVPSTSNAAEASKEKPA 272
27 -11.100[S] KOG4610 Uncharacterized conserved protein  ali follow..  10  328...........................................................................................................................................................................................................................................................................................................................AKSRQFQSRRKVQDADQNSIYMISNERGGDVKKKIKRAKDKDYAEQEAVYSKKKKDKKDKKKRKRKDTGYSTASSQNLYSTKASGTDKDTRRKDKKGKKSKRTCSSSPSDCDLAKKQKRKNADKNDKKKSRKIEAVVEESSSSSSSSSDSSNSTLPSYEVIDEKKARRRKHRGSSSDTSSGDSSSSSSS 516
28 -11.100[B] KOG2266 Chromatin-associated protein Dek and related proteins, contains SAP DNA binding domain  ali follow..  7  521.......................................................................................................................................................................................................................................................................................................................................................DESEEEKEEEEKQEEEKAEEKEEKKEEENENGIPDKSEDEAPQPSESEEKDESEEHSEEETTKKKRGSRLSAGKKESAGRARNKKAVVAAKSSPPEKITQKRSSAKRKKTDDDSDTSPKASSKRKKSENPIKASPAPSKSASKEKPVKRAGKGKDKPSDKV 681
29 -11.000[Z] KOG1425 Microfibrillar-associated protein MFAP1  ali follow..  7  154...................................................................................................................................................................................................................................................................................................................................................EIQEEEEEEEESEYETDSEDDMPGIALIKPVFVPKAERDTIAERERLEAEEEALEELAKRKLEQRKIETKQIVVEEVRKDEEIRKNILLEEANIGDVETDDELNEAEEYEVWKTREIGRIKRERDAREAMLREREEIEKLRNMTEQERRDWERKNPKPSSAQPKK 318
30 -10.900[R] KOG4299 PHD Zn-finger protein  ali follow..  6  2.......................................................................................................................................................................................................................................................................................................................................DAKPWNHTSEAFQASILEDLKIIQKAGAERNAKSSHGSINSRSASPNKATSRRNRAQNGNSNGRASVDNSDDGSKDDLDYSPSVKRKHVNGEGAEKGDHDTSNNGPSITKLRRKVRRTYDTKDGFVAWNTLDDDFRPIVPDQERSRKINPQKGNNNNLLKENKSLKTTAKDLSDISS 178
31 -10.900[S] COG3976 Uncharacterized protein conserved in bacteria  ali follow..  10  6......................................................................................................................................................................................................................................................................................................................................................................RGGPDGPPCEISTWKHNSMKQIALSLFVIAASGAYVWDQAGKNPANDMLGEALPADAAEAPTVQPKEPASAAALPVLRTSPAPLDPRFRTRLPIARETTAGIAVPAERPNDPVKQTVVPVAPQPSPAPPAQPVTPAVTDPASSTP. 150
32 -10.700[S] KOG2690 Uncharacterized conserved protein, contains BSD domain  ali follow..  4  300...............................................................................................................................................................................................................................................................................................................................................................STYSVAKVSTQDEVTSADSVTEVSNVGLKTDKDSEEKKETDSEEVPEEKSFVDAAPPASDEAPIQDSVKPTSDEAPIQDSVKPKSDEAAPSQDSAKPDVAASSSTQQPSEEDLGWDEIEDMSSIDGKETSRSGGSPNRAELRKRLSAAEEDED 452
33 -10.500[R] KOG2507 Ubiquitin regulatory protein UBXD2, contains UAS and UBX domains  ali follow..  7  212...................................................................................................................................................................................................................................................................................................................................................GSEAEAASPTALAAEKRAAASKVEGSATTSGAAARNFATNNLIPAVPLMTPAVPVPTQRPLEAQDNTESEERLAEVRNILEQKRKERVEEEKRMEKENELRRRRDGREAQSQQARAKEQELKNMQEQIKRERQEELAARERIRAQIAADRAEQAQRFNTPDISST 376
34 -10.400[WV] KOG4848 Extracellular matrix-associated peroxidase  ali follow..  6  100...................................................................................................................................................................................................................................................................................................................................................................................DSHGEKDSRQVMQLETLLKMLEKNRAQKAEELARINAREEDIAKKMEKLTQWKADLHAKIAKREADAAAAIQRKERLVEEVRRHFGFKVDTRDERFKEMLEQKEKEDKKKQKEAKRKAKEEKMMAKLVEKAS. 231
35 -10.300[S] KOG4502 Predicted membrane protein  ali follow..  11  9.......................................................................................................................................................................................................................................................................................LLLWSSIAGSL--LAPA-ADFSKLLKEAHQTDLMPVVEEDELQSLRHNGFQVFYTFHEQLHHLRQKTVGRNSATITEEMARIRNSIEDISEFSLDSNEVDEAINDITVPYGTKMKKSSKFAELSEIHNTDSSNKALPPFAFSEDQQESVDVVEKVEAVPPTTTTTKLTTLPSTTQSTTTRTTTQPSTIVSTRQKYVNVDGDIYVPGKTVISVSSTPIVDRTGTTT 236
36 -10.200[A] KOG4746 Small nuclear RNA activating complex (SNAPc), subunit SNAP43  ali follow..  8  270...........................................................................................................................................................................................................................................................................................................................................DQAHSAALKFSRTRRHRSVKPVIVPAETFEYAPDPKKKKEAQETMPVSGRNGRKRGRPKSVPKSKVSNPARILYEKLAEDMISEHLSTDLTEQEAFTDRPQSSLEPQKNELFNWDAAPQDAQISNQTTEPSCGEDIFIEDFGEFKSQDDVMFTAEDFNDSLIPPLADSDSDLE 442
37 -10.200[S] KOG2117 Uncharacterized conserved protein  ali follow..  9  20..............................................................................................................................................................................................................................................................................................................................................................RKTLSKKVLPIAPILGEDEEDNDVDKEISRQASKTKSLKKFEEQHKKALEEDPCAFAYDEVYDDTKQEAPLPRLHERQECNKPIYNQLMKEKADRRQKEREIVYERKLAKERAKEQHLFPDQVKVVTGSYKRKLEERDQWLSEERLRELGEEKD 173
38 -10.100[K] KOG2478 Putative RNA polymerase II regulator  ali follow..  5  367...................................................................................................................................................................................................................................................................................................................................................RKAQLENHEPEEEEEEEMETEEKEAGGSDEEQEKGSSSEKEGSEDEHSGSESEREEGDRDEASDKSGSGEDESSEDEARAARDKEEIFGSDADSEDDADSDDEDRGQAQGGSDNDSDSGSNGGGQRSRSHSRSASPFPSGSEHSAQEDGSEAAASDSSEADSDSD 531
39 -10.100[S] KOG4819 Uncharacterized conserved protein  ali follow..  6  2.....................................................................................................................................................................................................................................................................................................................................................................................................KPRSQKSQGKPNGKPNRGAGKVGHNQKPYFKNKNNQKAKGEKPNKPEIRNMKRKEKAAQEAAEREKVRADRDAQVKAYKKKRLEKTKAISKRTQKGQPLMKDRMQLLLKQIEEMK 116
40 -10.000[A] KOG2242 Scaffold/matrix specific factor hnRNP-U/SAF-A, contains SPRY domain  ali follow..  9  6..................................................................................................................................................................................................................................................................................................................................................LKVNELREELQRRGLDTRGLKTELAERLQAALEAEEPDDERELDADDEPGRPGHINEEVETEGGSELEGTAQPPPPGLQPHAEPGGYSGPDGHYAMDNITRQNQFYDTQVIKQENESGYERRPLEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSR 171
41 -9.850[K] COG5296 Transcription factor involved in TATA site selection and in elongation by RNA polymerase II  ali follow..  8  15.......................................................................................................................................................................................................................................................................................................................................................DDSDVASNRKRAHDDLDDVLSSSSDEDNNENVGQDYAEESGGEGNEKSEDEFEEKFKNPYRLEGKFKDEADRAKIMAMTEIERESILFEREEEISKLMERRELAIRLHQQNAQYMAQSTRRSTRDKPLTSAAAGKRDKLTELKKRRQERSARSVSERTRKR 175
42 -9.850[K] KOG2402 Paf1/RNA polymerase II complex, RTF1 component (involved in regulation of TATA box-binding protein)  ali follow..  8  15.......................................................................................................................................................................................................................................................................................................................................................DDSDVASNRKRAHDDLDDVLSSSSDEDNNENVGQDYAEESGGEGNEKSEDEFEEKFKNPYRLEGKFKDEADRAKIMAMTEIERESILFEREEEISKLMERRELAIRLHQQNAQYMAQSTRRSTRDKPLTSAAAGKRDKLTELKKRRQERSARSVSERTRKR 175
43 -9.760[R] KOG4095 Uncharacterized conserved protein (tumor-specific protein BCL7 in humans)  ali follow..  8  54.............................................................................................................................................................................................................................................................................................................................................................SKEKEKSKSNSSAAREPNGFPSDASANSSLLLEFQDENSNQSSVSDVYQLKVDSSTNSSPSPQQSESLSPAHTSDFRTDDSQPPTLGQEILEEPSLPSSEVADEPPTLTKEEPVPLETQVVEEEEDSGAPPLKRFCVDQPTVPQTASES...... 202
44 -9.690[K] KOG2393 Transcription initiation factor IIF, large subunit (RAP74)  ali follow..  8  301...................................................................................................................................................................................................................................................................................................................................................GNDPEEREDLLAPEIPAPPEIKQDEDDEENEEEEGGLSKSGKELKKLLGKANGLDESDEDDDDDSDDEEETNYGTVTNSKQKEAAKEEPVDNAPAKPAPSGPPRGTPPAKPSKGKRKLNDGDSKKPSSSVQKKVKTENDPKSSLKEERANTVSKSNTPTKAVKAE 465
45 -9.640[N] KOG4794 Thymosin beta  ali follow..  9  90...............................................................................................................................................................................................................................................................................................................................................................SEDRKNVRENQPVFSVEVKFDRSKLKKTNTGEKNRLSSKETIQQEKYGPSFRSQKAEEKLPQGGASGRADPGDLTLRRLERRIHTTQLFAAGTRRPAGDPALEKRQRRGLASWRGARTTRARLAAPASLPRKQGAPRCARGFPRPTPAPLRAE 252
46 -9.620[A] KOG2253 U1 snRNP complex, subunit SNU71 and related PWI-motif proteins  ali follow..  8  82...................................................................................................................................................................................................................................................................................................................................................DREAKNRPEASKRSRRSRSSSNSSSESDSSSSRSSSYSSRSRSRTPQRSRTSKRRRSNSHASEDSDDAREKRAFKQMMLDKKQAYLARLKRWESRERQMSKRYEREERKEKDRKKTLQKEGKRLKLFLEDYDDEKDDPKYYTSSQFFQRKRDYEREREADQKDRM 246
47 -9.620[S] COG5291 Predicted membrane protein  ali follow..  9  212.................................................................................................................................................................................................................................................................................................................................................................................NEHPSSCCKARKGITIREGRERHERNMGYSNASTTSGDSMASLTDMADTKSSTENSAVTEESQCCAESFKDSSVVSSQKSMAVSTVVGSSTEAKNNYLDFTEALCDKEVVAEQNPESQSNEEWDEKWGDSDNESE 346
48 -9.620[KTDL] KOG2043 Signaling protein SWIFT and related BRCT domain proteins  ali follow..  3  370...................................................................................................................................................................................................................................................................................................................................................LEQQVNHSQQGHTNANAVLFSQVKVTPETHMLQQQQQAQQQQQQHPVLHLQPQQIMQLQQQQQQQISQQPYPQQPPHPFSQQQQQQQQAHPHQFSQQQLQFPQQQLHPPQQLHRPQQQLQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQIQQ 534
49 -9.580[R] KOG2950 Uncharacterized protein involved in protein-protein interaction, contains polyproline-binding GYF domain  ali follow..  9  2...............................................................................................................................................................................................................................................................................................................................................................KRTLRNPGNSSTVGDVHDVFFEYDVSNVGRKRPRTKEEGYYESESEEDEDQILNKEKKEGQSEDMFSDTSEDEKRTLPNDEAQKRRDFIENGDAERLAHKGLRNKEVLNDDSDDEDDNGKYSKLRYEDIEGQEDTNQANDLDADEEGSEISVP 154
50 -9.490[S] KOG2885 Uncharacterized conserved protein  ali follow..  10  39...................................................................................................................................................................................................................................................................................................................................................AKKKTKEQSKNDKLKKLDPEQRDDETSSTLEVMKKKEKDAKPVVLPGEKFKHMKMQKQKEATSKVEGDSDLNVEVNDPMIIAPDEDEEEEEDIKVIFDDEGNEIPLESKKDTTEPDRSVEKKSITEEEKLQRKKNLEALRSKLQAKISDMKSKRKAPGSREAILA 203
51 -9.480[O] COG5380 Lipase chaperone  ali follow..  6  122...................................................................................................................................................................................................................................................................................................................................................ARIFSNEAHVAFFADEETYNQFTLERLAIRQDGKLSAEEKAAAIDRLRASLPEDQQESVLPQLQSELQQQTAALQAAGAGPEAIRQMRQQLVGAEATTRLEQLDRQRSAWKGRLDDYFAEKSRIEGNTGLSEADRRAAVERLAEERFSEQERLRLGALEQMRQAE 286
52 -9.480[R] COG1645 Uncharacterized Zn-finger containing protein  ali follow..  7  62................................................................................................................................................................................................................................................................................................................................................................EGEETPAPEPAAEVQVPEARSSPERDRPSPEQDRSSPERGRVPAERDRSSSETRKKIQARRPKTRFGQKAPETEGEEDKVLRFAEEEIPEPSYEAETARSTFPEVQAAPAVRTEKRTEQEVVSSVHGEREELENLLFEKMVNIAASLQNEKN 213
53 -9.420[R] KOG3263 Nucleic acid binding protein  ali follow..  8  30...................................................................................................................................................................................................................................................................................................................................................DRDYREYRRNYRDERSSRRYEDSQRRDYSPARRRDRYERHRESVREESPRRPVEHERNWQPELKHGRERFRERDYEGRRDRKERRDGVSPFSPEGEGLERKREHEKLQAPSPKEEEERPVDQGDKMDGVKEDKDGSLEVGKSHDAMTRTKSAEEEIVEQEDEATA 194
54 -9.390[T] KOG1882 Transcriptional regulator SNIP1, contains FHA domain  ali follow..  7  1..................................................................................................................................................................................................................................................................................................................................................MKAVKSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRD 166
55 -9.330[K] KOG2239 Transcription factor containing NAC and TS-N domains  ali follow..  4  2.................................................................................................................................................................................................................................................................................................................................................................KKAAQMATAAEKLKTAAEKSKTAADNVVAKEKPAEEASPSPSGSGKKGKPKATQKPNVAKALQKEISSSEDALDVKNKPPAGFSGAKGKPHIMGQMDPAYRNKIKKLMSLAKQLPPNVFSLPNSQKEEGASAAKSCVVEDDQSTDSDDAPD 152
56 -9.320[Z] KOG3977 Troponin I  ali follow..  8  2.....................................................................................................................................................................................................................................................................................................................................................YQKKDRACRIRRKQCKLFGDWQKSVITQLKTIQDKNISIHKAFGCMIRLAANLFYAHSKIIHFMSEEAGEDAQRKAAEREAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKALADRTISLPNVDSIDDKGQLEKIYN 164
57 -9.300[DA] KOG2609 Cyclin D-interacting protein GCIP  ali follow..  7  36...................................................................................................................................................................................................................................................................................................................................................FEKQNTGLAKVHEQTREPLDDKRIEEDSSEEEEEEEDNQEPQVDVTQLTGRQKKLFELRLKMNEARKSNQTDVGSEKKKMEAPTETKGISKQKWLEGRKKKIGKLLDANGLDMTQAYMLDTQEAAESKYKKWEKEPTPAGWDVFNQKTLYNAYKKRTKNIQVDLE 200
58 -9.030[L] KOG1929 Nucleotide excision repair factor NEF2, RAD4/CUT5 component  ali follow..  6  601...................................................................................................................................................................................................................................................................................................................................................SFAGKSGCGKGEVYNRLGEIGKEQTFPSKKAKLLRDGQESDVFPVRELPSNCDRPSHSGDGIVTGYDVASGREVPDVADTIEDLLEQTSKIQDQKSPGRILEKTVSLNEQYNTGNHSVTGLSRHWINRVHKNDDMGSPPGDATTDTYGNFSETQTESQVVGYEED 765
59 -9.030[A] KOG2412 Nuclear-export-signal (NES)-containing protein/polyadenylated-RNA export factor  ali follow..  4  84...................................................................................................................................................................................................................................................................................................................................................EPIVAASSIIVPHSTNMPLPRASHSSLLDNAKNSNATAPLLEAIEESFQRKMQNLVLANQKEIQSIRENKRRVEEQRKRKEEEERKRKEAEEKAKREQELLRQKKDEEERKRKEAEAKLAQQKQEEERKKIEEQNEKERQLKKEHEAKLLQQKDKLGKAVTNFDK 248
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Jaroszewski L, Li W, Godzik A. In search for more accurate alignments in the twilight zone. Protein Sci. 2002 Jul;11(7):1702-13.