current user: public


Query: [V] COG4170 ABC-type antimicrobial peptide transport system, ATPase component, from COG0516

Results of FFAS03 search in COG0516
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330
# Score Template Links and tools%idFirst MPLLDIRNLTIEFMTSEGPVKAVDRISMTLTEGEVRGLVGESGSGKSLIAKAICGVSKDNWRITADRFRFNDIDLLQLTPRQRRKVIGHNISMIFQEPQSCLDPSESIGLQLIQAIPGWTYKGRWWQRFHWRKRRAIELLHRVGIKDHKDIMHSYPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLARLNQNNNTTILLISHDLQMMSKWATRVNVLYCGQTVESAVCEDLLSTPHHPYTQALIRAMPDFGRSLPHKSRLNTLPGAIPSLEHLPVGCRLGPRCPYAQKTCIETPRLRLVKNHAFACHFPLNLEEQLast
1 -132.000[V] COG4170 ABC-type antimicrobial peptide transport system, ATPase component  ali  100  1MPLLDIRNLTIEFMTSEGPVKAVDRISMTLTEGEVRGLVGESGSGKSLIAKAICGVSKDNWRITADRFRFNDIDLLQLTPRQRRKVIGHNISMIFQEPQSCLDPSESIGLQLIQAIPGWTYKGRWWQRFHWRKRRAIELLHRVGIKDHKDIMHSYPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLARLNQNNNTTILLISHDLQMMSKWATRVNVLYCGQTVESAVCEDLLSTPHHPYTQALIRAMPDFGRSLPHKSRLNTLPGAIPSLEHLPVGCRLGPRCPYAQKTCIETPRLRLVKNHAFACHFPLNLEEQ 330
2 -121.000[EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component  ali follow..  36  2MSLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNGKIT-GSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKGMGK-----AEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDIFYNPSHPYAEGLLSAIPRLDTE---GEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKRPILLPFGNSRQRACFSDWEAWTK 324
3 -88.100[E] COG4608 ABC-type oligopeptide transport system, ATPase component  ali follow..  34  4.PLLEVKNLTKSFDINGGEVRAVDNLSFSVYEGEVLGIVGESGCGKSTTGKAILRLIEP----SSGEVYFAGTEITALSEGDMRKRR-RDMQIIFQDPYASLNPRHTIEKIIREPLIVHQIGTK-----KEQLERVEELLETVGLS--SDHATRYPHQFSGGQRQRIGIARALAVHPKLVICDEPVSALDVSVQSQILNLMADLKETFALTYIFIAHDLSVVKHISDRVAVMYLGRMVEMATKDQLFENPKHPYTRALLSAVPVPDPDAAKEKIL--LKGDVPSPSNPPEGCAFHTRCPDCMDVCKIPSLHEKEKGHYVACHLYE..... 322
4 -84.600[EP] COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component  ali follow..  33  4.PMLEIRNLSRCFPIHNAEVRAVDDVSFYIERGAVYGLAGESGSGKSTIARLIMGLEKP----SCGEIRIDGEMIAAGAHSRAHG---KKVQMVFQNPGSSLNPRRTVGQSVAVPLDAH------GFPSLQRAKRISELLEMVQLP--ANFAERFPHELSGGQKQRVAIARALAVAPKLLVLDEPTSALDVSVQAKVIDLLVDLGRRLDLTYLFISHDLSLMRNFASRVGILYRGKLVETGKTDEVFYRPQHAYTQLLLASVPVISAEEVMRPKIPLIDGEIPTAEKL---IELRGASAAAQASNAKTPMRNNQDD.............. 308
5 -83.000[P] COG4107 ABC-type phosphonate transport system, ATPase component  ali follow..  30  4.PLLQVHELSKSY----GGIKACDRISFDLYPGQVLGIVGESGSGKSTLLGAIADHIAV----DHGNVTYISRSIFQLAEAKRRLLMRTEWGFVQQNPRDGLRMRVSAGANIGERLLDIGVRHY-----GNIRDEAAHWLREVEID--PTRIDDLPAQFSGGMQQRLQLARVLVTRPRLILMDEPTGGLDVSVQARLLDLLRSLVRNFHLSVIIVTHDIGVVRLLAHRLLVMQQGQVVESGLTDQVLDDPQHPYTQLLVSAAL................................................................... 255
6 -79.800[R] COG4172 ABC-type uncharacterized transport system, duplicated ATPase component  ali follow..  38  6.TILSVKDLRVRFRTLDGAVEAVKGINIHVNAGETVAVVGESGSGKSQTMMAAMSLLASNGE-ATGSVDYRGRNLLTLSKSDLNKVRGAKISMIFQEPMTSLDPLYSIGNQLIEPIRRHRGLNA-----AEAREEALKLLRLVHIPDPERRMKSYPHEMSGGQRQRVMIAMALANDPDILIADEPTTALDVTIQAQILMLLAELQRKLGMAIVFITHDLGIVRRFADRVYVMRQGEVVEEGEAGAIFANPQHAYTKMLLAAEPTGSKAAPPANAPVVLE................................................... 277
7 -79.400[V] COG4167 ABC-type antimicrobial peptide transport system, ATPase component  ali follow..  28  4.TLLEVRNLSKTFRYRTGTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEP----TSGELLIDDHPLHFGDYSFRSQ----RIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEP-----EQRRKQIIETMRMVGLL--PDHVSYYPHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHISDQVLVMHQGEVVERGSTADVLASPLHELTKRLIAGHFGEALTADAWRK........................................................ 266
8 -75.500[R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase  ali follow..  33  29.PLLEVRNLVTEFPLRTGVFRAVNDISFSIEPGKTLCVVGESGSGKSVTARSILQIIDSPGYITSGSIILNKADGLDPRGRAIRAVRGADIAMIFQEPMSSLSPVHTVGDQITEVLRLHLKMSK-----AQARAEAIELLRQVEIPNPEKALDRYAFQYSGGMRQRAMIAMALACKPQLLIADEPTTALDVTTQAEILDLISRLQKAHGMAVLFITHDMGVVAQIADDVLVMHHGVVKEYGTVEQIFHKPQDPYTRMLIGSVLKLEQKAEIRLARPPLDQTAAPILEV.......................................... 317
9 -53.800[P] COG1135 ABC-type metal ion transport system, ATPase component  ali follow..  28  1..MIEIKSVNKVFYQGDKQIHALKDINLFIPQGTIFGVIGSSGAGKS----TLIRCVNMLEKPTSGQVIVDGVDLTTLSNPQLCAAR-RNIGMIFQH---NLLSSRTVFENVALPLEL------AGQSQQHIETKVTELLALVGL---SEKRESYPANLSGGQKQRVAIARALASDPKVLLCDEATSALDPATTQSILELLKEINRQLNLTILLITHEMDVVKSICHEVAIIGGGELVEKGTVGDIFAHPKTELAHQFIRSTLDLSIPEDYQVRLQP..................................................... 259
10 -51.500[Q] COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component  ali follow..  25  5.NSVEVHRLRKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKS----TLLAILAGLDDGSSGEVSLVGKPLHQMDEEARAQLRAQHVGFVFQS---MLIPTLNALENVELPALLR------GENSGQSKAGAKALLEQLGL---GKRLDHLPAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDPA-LAARCDRRLRLVNGQLQEEA......................................................................................... 228
11 -51.200[E] COG1126 ABC-type polar amino acid transport system, ATPase component  ali follow..  26  1..MINFKNVSKHF----GKIQVLHDINLNITQGEVVVIIGPSGSGKSTLLRCINKL-----VITRGQLIVDGLDVNS-PNIDERQIR-LEAGMVFQQ---YLFPHLTALENVAFGPTKVRGTSK-----EEAKKQALALLSKVGLED---RAHHYPAELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLTVMKDLAEE-GMTMVIVTHEVGFAQKVASRLIFIDKGRIAEDGDPDSLISNPPSERLREFLQHV.................................................................... 239
12 -50.500[E] COG4598 ABC-type histidine transport system, ATPase component  ali follow..  23  4.NKLNVIDLHKRY----GEHEVLKGVSLQANAGDVISIIGSSGSGKS----TFLRCINFLEKPSEGSIVVNGQTIKVADKNQLRLLR-TRLTMVFQH---NLWSHMTVLENVMEAPIQVLGLSK-----QEARERAVKYLAKVGI--DERAQGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEE-GKTMVVVTHEMGFARHVSTHVIFLHQGKIEEEGAPEQLFGNPQSPRLQRFLKGS.................................................................... 255
13 -50.200[E] COG4161 ABC-type arginine transport system, ATPase component  ali follow..  25  2..SIQLNGINCFY----GAHQALFDITLDCPQGETLVLLGPSGAGKS----SLLRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDRNVGMVFQQ---NLWPHLTVQQNLIEAPCRVLGLSK-----DQALARAEKLLERLRLKP---YSDRYPLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAET-NITQVIVTHEVEVARKTASRVVYMENGHIVEQGD-ASCFTEPQTEAFKNYLSH..................................................................... 242
14 -46.400[P] COG1118 ABC-type sulfate/molybdate transport systems, ATPase component  ali follow..  23  3...IEIANIKKSF----GRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT----SGHIRFHGTDVSRLHARDRK------VGFVFQH---ALFRHMTVFDNIAFGLTVLPRRER--PNAAAIKAKVTKLLEMVQLAHLADR---YPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPDQVWREPATRFVLEFMGEVNRLQGTIRGGQ......................................................... 251
15 -46.300[Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component  ali follow..  19  5.VAIEVKGLTKSF----GSSRIWEDVTLDIPAGEVSVLLGPSGTGKSVFLKSLIGLLRPE----RGSILIDGTDIIECSAKELYEIR-TLFGVLFQD--GALFGSMNLYDNTAFPLREHTKKKE-----SEIRDIVMEKLQLVGLGGDEKKF---PGEISGGMRKRAGLARALVLDPQIILCDEPDSGLDPVRTAYLSQLIMDINAQIDATILIVTHNVNIARTVPDNMGMLFRKHLVMFGPREVLMSEEKDESTMAEEAALLEAGHYAGGAEEVEGVPPQITVTPGMPKRKAVARRQARVRAMLPTLPK.................... 315
16 -45.600[H] COG3840 ABC-type thiamine transport system, ATPase component  ali follow..  23  1..MLKLTDITWLYHH------LPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTP----ASGALTIDGVDHTTTPPSR------RPVSMLFQE--NNLFSHLTVAQNIGLGLNPGLKLN------AVQQEKMHAIARQMGIDNLMARL---PGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGMTNELLSGKA............................................................................... 222
17 -45.600[R] COG4136 ABC-type uncharacterized transport system, ATPase component  ali follow..  20  1..MLCVKNVSLRL----PESRLLTNVNFTVDKGDIVTLMGPSGCGKSTLFSWMIGALAEQFS-CTGELWLNEQRIDILPTAQ------RQIGILFQD---LLFDQFSVGQNLLLAL-------PATLKGNARRNAVNDALERSGLEGAFHQ---DPATLSGGQRARVALLRALLAQPKALLLDEPFSRLDVALRDNFRQWVFSEVRALAIPVVQVTHDLQDVPADSSVLDMAQWSENYNK.......................................................................................... 215
18 -45.500[P] COG4778 ABC-type phosphonate transport system, ATPase component  ali follow..  21  1..MINVQNVSKTFQQNGVRLPVLNRASLTVNAGECVVLHGHSGSGKS----TLLRSLYANYLPDEGQIQIEWVDLVTAPARKVVEIRKTTVGWVSQ--FLRVIPRISALEVVMQPLL------DTGVPREACAAKAARLLTRLNVP--ERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKTR-GAAIVGIFHDEAVRNDVADRLHPMGAS............................................................................................... 225
19 -45.400[V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component  ali follow..  20  2ANMLEVKHINKTY-KGQVSYQALKQISFSIEEGEFTAVMGPSGSGKT----TLLNIISTIDRPDSGDILINGENPHRLKRTKLAHFRRKQLGFVFQD---NLLDTLTIGENIMLPLTLEK------EAPSVMEEKLHGIAAKLGI---ENLLNKRTFEVSGGQRQRAAIARAVIHKPSLILADEPTGNLDSKATKDVMETLQSLNRDDHVTALMVTHD-PVSASYCRRVIFIKDVVLFNE.......................................................................................... 224
20 -44.600[R] COG4619 ABC-type uncharacterized transport system, ATPase component  ali follow..  22  6.PLLQLQNVGYLA----GDAKILNNINFSLRAGEFKLITGPSGCGKSTLLKIVASLISP----TSGTLLFEGEDVSTLKPEIYRQ----QVSYCAQTPTL-----------FGDTVYDNLIFPWQIRNRQPDPAIFLDFLERFALP--DSILTKNIAELSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEMIHRYVREQNIAVLWVTHDKDEIN-HADKVITLQPHAGEMQEARYEL.................................................................................... 224
21 -44.200[D] COG2884 Predicted ATPase involved in cell division  ali follow..  27  1..MITLDHVSKKY--KSLARPALDNVNVKIDKGEFVFLIGPSGSGKS----TFMRLLLGAETPTSGDVRVSKFHVNKLPGRHIPRLR-QVIGCVFQD---RLLQQKTVYENVAFALEV------IGRRSDAINQVVPDVLETVGL---SGKANRLPDELSGGEQQRVAIARAFVNRPLVLLADEPTGNLDPDTSKDIMDLLERINRT-GTTVLMATHDHHIVDSMRQRVVELSLGRLVRD.......................................................................................... 219
22 -43.900[E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components  ali follow..  22  3.PVVHFKNVNKYY----GGLPAVDDLDLAVESGQFVTLLGPSGCGKSTTLRMLGGFEQP----SSGEIYLEGKPITHLPPNR------RNVNIVFQD---ALFPHLNVGRNIAFGLELKG------LSSDAIHKRTMELLALVKLQDFADR---MPDQLSGGQRQRVALMRALAPDPNVLLLDEPLSALDAKLRQQMQIELKTIQRTTGKTFIFVTHDQEEALTMSDVIVVMNKGRIEQMGGPNELYSRPRSRFVANFIGQSNFLEGKLLSHD......................................................... 249
23 -43.800[E] COG4175 ABC-type proline/glycine betaine transport system, ATPase component  ali follow..  25  22FKYIEKGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEP----TRGQVLIDGVDIAKISDAELREVRRKKIAMVFQS---ALMPHMTVLDNTAFGMELA------GIAAQERREKALDALRQVGLENYA---HAYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGV.................................................................... 268
24 -43.600[P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component  ali follow..  21  16.TAIELKDVQISFRLADGRFDAVAESNLAVAENEFVAIVGPTGCGKSTLLNAVAGLLTP----ASGTVEISGQRLQGL---------NRKAGYLFQQ--DALMPWKTVLENVAIGLEIA------GTPKAKAREQAREWLNKVGLGTFG---DRYPHMLSGGQRKRVGLAQVLIRNPKYLLMDEPFGPLDAQTRVIMGDLLLDLWSQDKKAVMFVTHDLEEAIALADRVVIMSAARIMAEYRIP...................................................................................... 238
25 -43.500[CP] COG4555 ABC-type Na+ transport system, ATPase component  ali follow..  23  1..MITLTDCSRRFQDKKKVVKAVRDVSLTIEKGEVVGILGENGAGKTTMLRMIASLLEP----SQGVITVDGFDTVKQPAEVKQR-----IGVLFGGETG-------LYDRMTAKENLQYFGRLYGLNRHEIKARIEDLSKRFGM---RDYMNRRVGGFSKGMRQKVAIARALIHDPDIILFDEPTTGLDITSSNIFREFIQQLKRE-QKTILFSSHIMEEVQALCDSVIMIHSGEVIYRGALESL.................................................................................... 224
26 -43.500[RK] KOG2355 Predicted ABC-type transport, ATPase component/CCR4 associated factor  ali follow..  15  12.DAIRVSGMQFAY---EVEDPIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGG---KNVVQVLSRSAFHDTQLVCSGDLSYLGGSWSKTVGSAGEVPLQGDFSAEHMI---------FGVEGTDPVRREKLIDLLDINLQWRM-----HKVSDGQKRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFFKEECDQRGATIVYATHIFDGLETWATHLAYIQDGELNRLSKMTDI.................................................................................... 236
27 -42.600[P] COG1121 ABC-type Mn/Zn transport systems, ATPase component  ali follow..  20  4.PILKVENLTVYQ----GNYLAIRDVSFNLLPGTDTAIVGPNGAGKSTLVKAILDLIPR----RVGQIEIFGRPITKLGNLRHLLGYMPQNFIFDRSFPISVEELVGLGWVAEARHQKSSFLSKLRIQSREKSAAIATALKRTDTYHLRNQ------TLSGGQLKRILLAYCLVIPRKILVLDEAFAGVDMQGAADFYAMLNELKQQEGWTVLQVSHDIDMVSRHCDRVLCL--QTVVCTGQPEIALSPQNLLATYG......................................................................... 247
28 -42.400[P] COG4525 ABC-type taurine transport system, ATPase component  ali follow..  27  1..MLNVSGLWAEY----QGKPALQDVSLQIASGQLVVVLGPSGCGKTTLLNLIAGFMTP----SAGVITLDNIPVSG----------SAERGVVFQN---GLLPWRDVVSNVEFGLQLA------GMSKEQRRVTALKMLNRVGLAGFE---HHFIWQLSGGMRQRVGIARALAVDPRLLLLDEPFGALDAFTREQMQELLLTIWRDTGKQILLITHDIEEAVFLASELLLLSPGQVVERLSLN...................................................................................... 216
29 -41.800[E] COG1125 ABC-type proline/glycine betaine transport systems, ATPase components  ali follow..  25  1..MIELDKLSKTFTQKNGKFRAVDSVSLTVEKGEICVFLGPSGCGKTTTLKMINRIIPP----TSGRVLIDGQDTADLDEVTLRR----HIGYVIQQ--IGLFPNMTIEENIMVVPRL------LGWDKARCKEKARELMSMVKL-EPKQYLQRYPRELSGGQQQRVGVIRALAADAPLLLMDEPFGAVDPINRESIQNEFFEMQRKLGMTVIMVSHDIDEAIKLGDKVAVFKSGRLLQYDHPDTLLAHPADEFVSAFTGQ..................................................................... 243
30 -41.500[P] COG3638 ABC-type phosphate/phosphonate transport system, ATPase component  ali follow..  23  23.KVLAVKGLVKAYKSQH---RVLDNINFELHAGEFVAIIGRSGAGKSTLLHILNGTIPTSGEIINYHENGDTQNIAALTTKQMRKWR-AKCGMIFQD---CLVPRLDVITNVLLGRLSYTSTLKSFFKLEQDQARAIELLQWLNM---LPHALQRAENLSGGQMQRVAICRAMMQNPKILLADEPVASLDPKNTTRIMNTLQKISEN-DIAVIVNLHSVDLVKDYCTRVIGIAHGRIIFDGPPSML.................................................................................... 260
31 -39.300[E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component  ali follow..  21  1..MLKLASISKRF----GGLSVLQDVNIEVPQGTIFGLIGPNGAGKTTVFNLITGLLEP----TGGTLTFGGTSLVGKKPHQ---ITQMGIARTFQN--IRIFKEMTLLENVVVGMHRHLDYGGYRAAERRARDRALELLSWVKL---DHKAGDIADNLSYGDQRKLELARALATEPKLLLLDEPVAGMNTGEKVDLMAEIENIRA-RGYTIFMIEHDMRFVMGLCERIAVLNFGRIIAEGPPEAIRNNPQ............................................................................... 241
32 -39.300[G] COG3839 ABC-type sugar transport systems, ATPase components  ali follow..  23  3MSFLKITDLYKSY----GSVSVLKDINIEIDEGGFLVLVGPSGCGKSTLLNTIAGL-----PITSGDIAINGKSVSNLHPSQ------RDIAMVFQS---ALYPNMTVAGNIAFGMEIRK------VPKPERDKAIQQVADMLQI---GHLLDRKPSQLSGGQRRRVAMGRALVRNPQVFLFDEPLSNLDAKLRVDMRTEIKRLHSRMKTTIVYVTHDQIEAMTLATKIAVLKDGVLQQFGTPAEIYNNPANMFVADFMGS-PAMN................................................................ 242
33 -38.600[R] COG1101 ABC-type uncharacterized transport system, ATPase component  ali follow..  20  1..MIRLQDIQVTFNPGTLENRALRGVSLEVPEHQFLTVIGSNGAGKS----TLLGAVTGETPIVGGQVLIDEIDVTKQSVDQ----RANLCARVFQDPLAGTCGALTIEENMALAYMRGKKRGWSLALSNQRRKLFQERISILGL---EDRLGDNIGLLSGGQRQAVSLVMATLSESKLLLLDEHTAALDPRMAAFIIDLTKKIVKEFNLTVMMVTHSMKDALACGDRTVMLHQGQIV............................................................................................ 228
34 -38.000[P] COG4604 ABC-type enterochelin transport system, ATPase component  ali follow..  18  1..MIEINDVNKKY----QQTTVLNEINERIPSGGITSIIGPNGAGKSTLLSIMSRLLAAD----SGNVLFNGLDVAKTSGDKL----ATILSVLRQENHFTSR--LTVSDLVGFGRYPYSR-GRLNKNDRQHIDAAMEFLNLMPLKD------RYLDELSGGQRQRAYVAMVLCQDTSYILLDEPLNNLDMKHCVAMMKQLRRAADELHKTIILVIHDINFASAYSDHIIAMKNGEVIYRGAPAEIMQP................................................................................. 226
35 -37.900[P] COG4559 ABC-type hemin transport system, ATPase component  ali follow..  21  6.PSIRVTDLSYSV----AGRELLSKLKFHLQSGEMLAVLGRNGAGKSTLLKHLTGELGK------SGVELFGQPLRDIKPAEAAKRRA----VLPQQTPLSFA--YEVLDVVLLGRIPHGQ-----RETVQDRAIAAACLERVGLSGYETRDVL---TLSGGEQQRVHFARTLA-GERVLLLDEPTASLDLAHQHATLRLARELCRE-GVGVLAVLHDLNLAAQYADRVLMLAEGHVIACDHPAVALTP................................................................................. 233
36 -36.400[P] COG1117 ABC-type phosphate transport system, ATPase component  ali follow..  24  25...MATEDLHVYY----GDNHAIKGVDLTFPENKVTALIGPSGCGKSTYLRALNRMND-DGCRMEGQILYDGININR-KEVDLYNVR-KEIGMVFQKP----NPFKSIYENVAFGLKRHGMKNK-----KEIMERVEKSLRRAALDEVKDDLGKSALSLSGGQQQRLCIARAVAMQPKVLLLDEPASALDPISTSKIEDLINELKNKY--TIIIVTHNMQQAARVSDYTSFFYLGEVVEFSGTSELFTNPQEKQTEDYISG..................................................................... 268
37 -34.700[H] COG4138 ABC-type cobalamin transport system, ATPase component  ali follow..  19  3.IVMQLQDV--------AESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMTS-----GKGSIQFAGQPLEAWSATKLALHR----AYLSQQQTPPFA-------PVWHYLTLHQ-------HDKTRTELLNDVAGALALDDKLGRS----NQLSGGEWQRVRLAAVVL-AGQLLLLDEPMNSLDVAQQSALDKILSALCQQ-GLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRREEVLTP................................................................................. 223
38 -34.400[E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component  ali follow..  21  1..MLSFDKVSTYY----GKIQALHDVSVEVKKGEIVTLIGANGAGKSTLLMTLCGSPQA----ASGSIRYEGEELVGLPS---STIMRKSIAVVPE------------GRRVFSRLTVEENLAMGGFFTDKDDYQVQMDKVLELFPRLKERYEQRAGTMSGGEQQMLAIGRALMSKPKLLLLDEPSLGLAPIIIQQIFEIIEQLRRE-GVTVFLVEQNANQALKLADRAYVLENGRIVMHDTGAALLTNPK............................................................................... 225
39 -34.300[R] COG4674 Uncharacterized ABC-type transport system, ATPase component  ali follow..  23  4.KILEIQDLTVSF----DGFRALNHLTFSMNPGELRVIIGPNGAGKT----TFLDVITGKVQPTEGRVLFQGKDIRKIPEYR---IARLGVGRKFQTPRVYLNLTVAENLDLAVNRKKSVWGTLMGQATGAEQRSVGGLLETIGL---TPKAHLAAALLSHGEKQRLEIGMLVAQSPTLLLVDEPVAGLTDEETENVGDLLLALAESH--SIIVIEHDMEFVRQIARKVTVLHQGSVLCEGNMDQIQNDPK............................................................................... 237
40 -34.200[PH] COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components  ali follow..  18  3MSAISTETLSLGY----GDAVIIDELNLTIPKGEITVFIGSNGCGKSTLLRSLARLMKP----RGGSVLLEGRAIAKLPTKEV----AKELAILPQGPSAP----LTVHQLVKQGRYPYQNWLKQWSKEDE--EAVERALKATKLEDMADRAVD---SLSGGQRQRAWIAMTLAQETDIILLDEPTTYLDMTHQIEILDLLFELNEKEDRTIVMVLHDLNLACRYAHHLVAIKDKRIYAEGRPEEVITCDLVQNVFSMNCQV.................................................................... 245
41 -33.800[R] COG1137 ABC-type (unclassified) transport system, ATPase component  ali follow..  21  1MSILTAENLAKSYKSR----KVVSDVSLTVNSNEIVGLLGPNGAGKTTTFYMVVGLVRQD----QGKIVIDGEDISLLPMHNRAQR---GIGYLPQE--ASIFRRLTVYENLMAVLEIRKDLTP-----QQRREKADELIEEFNISHIRDNLGQ---ALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVSDIKKIITDLRNR-GLGVLITDHNVRETLDVCERAYIVGAGKIIATGTPEQVMNDEQ............................................................................... 229
42 -33.800[R] COG4586 ABC-type uncharacterized transport system, ATPase component  ali follow..  23  22........LQHFWQRRYRQILAVQDISFTIPPGAMVGFLGANGAGKTTTLKMLTGLIKP----SGGKVRVAGFDPFRRQTAFLRRTMGQKQQLIWDLPTLDSLRINGAIYEIPD------------QVFEQRLGELSEMLDL------TTELKQPVRKLSLGQRMKAELLAALLHHPTVLFLDEPTLGLDVNAQVAVRRFLQEYNRRYQATVLLTSHYMADITTLCERVLLIHQGQLMYDGDLEALVER................................................................................. 243
43 -33.700[R] COG4152 ABC-type uncharacterized transport system, ATPase component  ali follow..  22  1..MLTIDHVTKTF----GDYKAVDGLDLDIPEQQMFGLLGANGAGKTTTFRMILGLLSIT----EGSISWKGRPVNYHISNKI-----------YLPEERGLYPKMKVRDQLVYLARLK------GMEKREAVKELGTWLERFNITD---YENKKVEELAKGNQQKIQFISAVLHKPELLILDEPFSGLDPVNVELLKEAVISLKNS-GVSILFSSHRMEHVEELCENLCILQKGKPVVQGKLKEI.................................................................................... 216
44 -33.600[V] COG1131 ABC-type multidrug transport system, ATPase component  ali follow..  21  3.SILSISGVS---KTYATGFTALKEVNLDIQRGEIFALLGPNGAGKTTLISIVCGIVNR----STGTVTVDGHDIGKDYRAARSL-----IGLVPQE----------LTIDAFESVWATVNYSRGLFGKPPNHGFVEKVLRDLSL----DKKDAKAITLSGGMKRRLMIAKALSHEPRILFLDEPTAGVDVELRQDMWEMVRRLRED-GVTIILTTHYIEEAEAMADRVGVINRGEIILVENKAELMHK................................................................................. 224
45 -33.500[P] COG4148 ABC-type molybdate transport system, ATPase component  ali follow..  25  2........LELNFSQTLGNHCL--TINETLPANGITAIFGVSGAGKTSLINAISGLTRPQ----KGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQD--ARLFPHYKVRGNLRYGMA------------KSMVDQFDKLVALLGI---EPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSS................................................................................ 220
46 -33.500[V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain  ali follow..  23  477...VELKNITFGYSRLEAPL--IENFNLSIKPGQRVALVGGSGSGKSTIAKLVSGLYQP----WTGEIYFDSQPREEISLQLLT----NSVAMVEQE-------ILLFGGTVRDNLTLWDTTVPDKNLMRACQDAAIADVIFSMSGGYDAELIEGAANLSGGQRQRLEIARALVNNPSILVMDEATSALDAETEKIIDQNLRRR----GCTCIIVAHRLSTIRD-CDQIIVLERGKVVQQGTHQELWQV................................................................................. 700
47 -31.000[CO] COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components  ali follow..  24  338....SLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQQLTRAWDP----QQGEILLNDSPIASLNEAALRQ----TISVVPQRV-------HLFSATLRDNLLL--------ASPGSSDEALSEILRRVGLEK-NSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMR--EKTVLMVTHRLRGL-SRFQQIIVMDNGQIIEQGTHAELLAR................................................................................. 562
48 -30.300[R] COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain  ali follow..  20  412..VLESFGVRQRV----VERYVLRDVNLEIKPGEIVAVVGASGSGKT----TFLRLIVGEALKLDDDVYKPSSGMVEVVVDSIAAMIPSE-----------LEPQITEKSILEQIF-----------DITGDIHLAVEVLNRAGISD-AVLYRARFNELSTGQKERFKLAACLAKKPSLMLVDEFAAHLDEMTAVRVARKISELAREAKITLIAVTHRKEVINALSDRILYVGYGGVTES.......................................................................................... 619
49 -30.300[CO] COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components  ali follow..  22  350...IIANDLVVLSPQGK---RLAGPLSFTLQSGKTTALVGPSGAGKTSLINTILGFMP-----YQGSLTINGIELRELDHAQWRQ----TISWVGQNP-------LLLYGTIRDNVTLGKNIADEQVTQTLQAAYAQEFVEQQGL---DYPISDRSAGLSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQ--QRTALFVTHQLQPLQS-VEQILVMENGLLVQAGHFEDLSQQ................................................................................. 571
50 -30.200[G] COG1129 ABC-type sugar transport system, ATPase component  ali follow..  22  227.KVIEVEELQLK--------KGGPVSRFSLRKGEILGFAGLVGSGRTETVLAMLGAHSAS----RRKIKLDGVDTRLSGPDDALM---RGIGLLPESRKEGLITSFSILQNISLNNYRKYRKAHWFLDLKKELEHTTKAMAQVQVKAQGP--YARVDTLSGGNQQKIVIARWLNHDMRVLIFDEPTRGIDVGAKAEIYSLMREFAAR-GHSIIMISSELPEVIGMSDRVCVFRSGGIVATVEGEDI.................................................................................... 454
51 -29.100[A] KOG0063 RNAse L inhibitor, ABC superfamily  ali follow..  17  75LPKDLAKDTTHRY----GANGFKLHRLPIPRPGQVLGLVGTNGIGKSTALKILAGKLKPN-----GRFNTPPDWEEILTHFRGSELQSYFIRVVEENLKTAIKPQHV--DYIKEVVRGNLGKMLEKLDERGLMEEICADMEL------NQVLEREARQVSGGELQRFAIAAVFVKKADIYMFDEPSSYLDVRQRLKAAQVIRSLLRH-DSYVIVVEHDLSVLDYLSDFVCCLYGKPGAYGVVTLPFVREGINVFLAGFIPT..................................................................... 319
52 -28.900[P] COG1122 ABC-type cobalt transport system, ATPase component  ali follow..  22  6.RLIELRVDKYTY---PNGRVGLSDFYATFEGCDF--IIGPTGSGKSTVLKMVNGLIPN-GGTLEGKVRVFG-----------EKPNPRIAFFVKQNPEEMI--STQVIDELVFPL------IQQGFGWGEAKREAEEVCEELGI---GGLLERKTYELSTGELQLVQIAAALASKARILVFDEPFANLSRKNVLKVIKILR------DYPHLVSEHRLEFSSFFEKTINLGLECEDFEIPEVEP..................................................................................... 218
53 -28.200[P] COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA  ali follow..  22  5MSSLQILQGTFRL----SDTKTLQLPQLTLNAGDSWAFVGSNGSGKS----ALARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGP------------GEDDTGRTTAEIIQDEVKDAPRCMQLAQQFGI---TPLLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAERLASLHQS-GITLVLVLNRFDEIPEFVQFAGVLADCTLAETGAKEELLQQ................................................................................. 229
54 -28.200[V] COG1132 ABC-type multidrug transport system, ATPase and permease components  ali follow..  23  341....DIEFRHVTFYYPGKDTPALNDINIHLEAGKTVALVGRSGSGKS----TIANLLTRFYDVSEGSILLDGHDLRDYRLGALRN----QVALVSQN-------VHLFNDTVANNIAYARNEQYSRAEIEEAARMAYAMDFINKMEHGDTVIGENGIMLSGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDELQK--NRTSLVIAHRLSTI-EKADEIVVIEDGRIVERGVHAELLVQ................................................................................. 568
55 -28.100[R] COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog  ali follow..  21  334.SMVSFNSFSKQY----GDGFSLKATGGSLREGEVLGIVGPNGIGKSTFVKVLAGEIKPD----------EGDPGIEVKISYKPQYIKADTPVSVQDFLRGITKRFGTSYYEVE------------------------IANPLQL---ERIYESLLTELSGGELQRVAIAACLSQEADLYILDEPSAHLDVEQRSMVTKVINRFAENNQKTAMVVDHDIYMIDMLSQRL-LVFEGKPSVYGEAHG..................................................................................... 535
56 -27.800[QP] COG4615 ABC-type siderophore export system, fused ATPase and permease components  ali follow..  22  323...LELRNVTFAYQDNA----SVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQP----QSGEILLDGKPVSGEQPEDYRKL----FSAVFTD------------VWLFDQL-LGPEGKPANPQLVEKWLAQLKMAHKLELSNGRIVNL----KLSKGQKKRVALLLALAEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISHDDHYF-IHADRLLEMRNGQLSELTGEERDAAS................................................................................. 539
57 -27.600[O] COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component  ali follow..  20  1..MLEIRNLHARIVDDGTEI--IRGLNLTVKAGEVAAIMGPNGSGKSTLSYILAG--REDYEVTEGDILYNGQSILEMDPAERAT---SGIFLAFQYPME---PGVATMEFLKVAMNEQRKARGEEPLKIPEFLKRVKEAAASLNMDMAMLKRPLNVGFSGGEKKRAEILQMKLLEPKLCVLDETDSGLDIDALKIVSDGVNALRAP-DRAFLVITHYQRLLEHIVDSVHVLYRGQVIKSGDKSLALDLEANGY............................................................................ 243
58 -26.400[O] COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component  ali follow..  20  1..MLEARELLCE----RDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLLRLLTGLSRP----DAGEVLWQGQPLHQVRDSYHQNL-------LWIGHQPGIKTRLTALENLH------------FYHRDGDTAQCLEALAQAGLAGFEDI-----NQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVNGVDRLTQRMAQHTEQGGIVILTTHQPLNVAESKIRRISL................................................................................................... 199
59 -26.100[U] KOG0058 Peptide exporter, ABC superfamily  ali follow..  22  504...VDFENVTFTYRTRPH-TQVLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPL----EGGRVLLDGKPISAYDHKYLHR----VISLVSQEPVL-------FARSITDNISYGLPTVPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQ--KHTVLIIAHRLSTVEH-AHLIVVLDKGRVVQQGTHQQLLAQ................................................................................. 730
60 -25.700[R] COG4618 ABC-type protease/lipase transport system, ATPase and permease components  ali follow..  18  336...LRVENVTIV--PPGERKPTVTGLGFVVTAGNALGIIGPSGSGKSTLARILTGAWMP----AAGKVRLDGASFDQWDRETL----GRHIGYLPQG-------VELFDGTIGENISRFDDNPDPEAIIAAARAAGAHEL-ILRFEKGDSDIGEAGSTLSAGQRQRIGLARALYGDPFIVVLDEPNANLDAEGEAAVVKAITSVKAR-GGIAVVVAHRPSAIGA-VDYILMMEDGRMKAFGPRDEVLSK................................................................................. 562
61 -25.700[R] COG3845 ABC-type uncharacterized transport systems, ATPase components  ali follow..  22  5..AIELIGINKSF----GAVRANRDINLEIARGTIHGIVGENGAGKSTLMSILYGFYQAD----SGEIRVGGKPASIKTPNDAIAL---GIGMVHQHFM--LVDNFSVLENI---ILGAESDALLKSSIAKARSELERLEREYGLEDPDAIIE----ELPVGLQQRVEILKALYRGAEILILDEPTGVLTPAEADHLFRILKQLKEQ-GKTVVLITHKLREIMAITDNVSVMRQGTMVATRETSKTTVGELAELMVGRRVLLRVEKGEAEAGAVKLAVKN.................................................. 262
62 -24.000[EJ] KOG0062 ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b  ali follow..  18  5.IEIVNTDFSLAY----GSRMLLNKTNLRLLKGHRYGLCGRNGAGKSTLMRAIAN------------------QLDGFPDKDTLRTCFVEHKLQGEEGDLDLVSFIALDEELQST----------------SREEIAAALESVGF--DEERRAQTVGSLSGGWKMKLELARAMLQKADILLLDEPTNHLDVS---NVKWLEEYLLEHTDITSLIVSHDSGFLDTVCTDIIHYENKKLAYYKGNLAAFVEQK............................................................................... 212
63 -23.900[R] KOG0927 Predicted transporter (ABC superfamily)  ali follow..  18  384.PVIMVQNVNFRYNDETPWI--YKNLEFGIDLDTRLALVGPNGAGKS----TLLKLLYGDLVPTSGMIRKNSH----------------RIARYHQHLHELLDLDASPLEYMMRA-----------FPDVKEKEEMRKIIGRYGLTGRQQVCPI--RQLSDGQRCRVVFAWLAWQVPHLLLLDEPTNHLDM----ETIDALADAINDFDGGMVLVSHDFRLINQVAEEIWVCEKETV-------TKWKGGILDYKDHLKNKITSENEKKAKAGK........................................................ 611
64 -23.800[O] COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components  ali follow..  22  363...ISFKDVHFAYDPQR---PILRGISFDVPAGKTVAIVGPSGAGKSTISRLLFRFYD----IQSGSITIDGQDVRDVTQESLRK----FIGMVPQD-------TVLFNDTIAYNIRYGRTDASEEDVEKAAELAQIAGFIKHLPDGYKSMVGERGLKLSGGEKQRVAIARTILKAPPILILDEATSALDTATEQEIQSALDIVSR--GRTTLVIAHRLSTVIG-ADEIIVLKDGLIAERGTHRHLLDQ................................................................................. 587
65 -23.200[Q] KOG0061 Transporter, ABC superfamily (Breast cancer resistance protein)  ali follow..  22  108....................TLLNNISGETRDGEIMAVLGASGSGKSTLIDALANRIAKGS--LKGTVKLNGETLQSRMLK-------VISAYVMQDDL--LFPMLTVEETLMFAAEFRLPRS---LPKSKKKLRVQALIDQLGIRNAAKTIDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLKRIAQSGSIVIMSIHQPSHRVLGLLDRLIFLSRGHTVYSGSPASL.................................................................................... 321
66 -22.700[P] KOG0056 Heavy metal exporter HMT1, ABC superfamily  ali follow..  22  576...IEFSNVTFGYSPEK---IVLRNVSFTVPAGKTVAIVGPSGAGKSTIMRLLFRFYD----VQTGAILIDGQNIKLVQQQSLRKAIG-QDTVLFNN---------TIFYNIE-----YAKLGASDEAVYEAARAADIHERILGFPEKETKVGERGLRLSGGEKQRVAIARTLLKAPIIVLLDEATSALDTHTERNIQAALARVCA--NRTTIIVAHRLSTIIH-ADEILVLQQGSIAERGRHEELVLREDGIYAD.......................................................................... 807
67 -22.700[R] COG3910 Predicted ATPase  ali follow..  9  4LDSVAMKEKPEGREEYPFSVPAMRHLERLEFKTPITFFAGNNGSGKSTLLEGLMTAYAIGNHGDVKGDLYLQHAETVAKAFYFARKKYPKIRMFLR--AEDVLGYIRRQNENALDDFRWEREKALKKGEDFPEETPEIFRGIVR--------NNSLDRRSHG-EGFLDIMHRRLHGAGLYFLDEPESPLSPQKQLELAAIIRQAADS-GGQLIIATHSPVLLAIPEATIYYFDEDGITERL......................................................................................... 235
68 -22.600[U] KOG0057 Mitochondrial Fe/S cluster exporter, ABC superfamily  ali follow..  24  439...ISFENVHFSYLPER---KILDGISFEVPAGKSVAIVGSSGSGKSTILRMIFRFFD----VDSGNVKIDGQDIKEVRLESLRS----SIGVVPQD-------TVLFNDTIFHNIHYGNLSATEEEVYNAARRAAIHDTIMKFPDKYSTAVGERGLMLSGGEKQRVALARAFLKSPAILLCDEATSALDSKTEAEIMKTLRSLAS--NRTCIFIAHRLTTAMQ-CDEILVMEKGKVVEKGTHEVLLGK................................................................................. 663
69 -20.400[GM] COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component  ali follow..  18  289..VVKAENIGMSFNFKNETFWALKNVSFDIKEGEVVGIIGHNGAGKSTLCKLLTKILTP----DEGELELSGETTSLL-----------SYGTGFNAQLSGKDNVYLNGMLL-------------GIPKERVAQEYPNIVAFSEL---EKHMDKPVKSYSSGMKSRLGFSIAATLQPDIFIIDEALSTGDVAFQQKASEKIQEMMER-AKAVIIVSHSMKFVESVCTRAIWLEKGQVRFDGDPEEAVKL................................................................................. 503
70 -20.000[J] KOG0066 eIF2-interacting protein ABC50 (ABC superfamily)  ali follow..  18  672.PILGVHNVTFAF---PSQKPLFIKVDFGIDLTSRVAIVGPNGVGKS----TFLKLLLGELEPQEGEQRKNHR----------------HVGRFDQHSGEHLTAEESAAEYLQRLF-------------NLPHEKARKALGSFGLVSHAHTIKM--KDLSGGQKARVALAELCLSAPDVLILDEPTNNLDI----ESIDALAEAINEYEGGVIIVSHDERLIRETGCTLYVIEDQTI-------NEIVGEFDDYRKEVLDSLGEVVNNPSVVANAAVLQ................................................... 901
71 -19.000[R] COG4178 ABC-type uncharacterized transport system, permease and ATPase components  ali follow..  17  426...VHVVAVEVRTSAGE---QLIDPLDLQLNCGSSLVITGRSGVGKTTMLRSLAELWP----YASGTLSRPDGK--------------NETMFLSQLPYV---PLGNLRGVVCYP----------NAPADIPEDTVRDTLTKVALNPLCDRLDEWAKILSPGEQQRIAFARILLTKPKAIFLDESTSALDEGLEFALYQMLRS--ELPDCIIVSVSHRRAVELLHAQQLELLGGGQ.............................................................................................. 625
72 -17.600[IR] KOG0060 Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis)  ali follow..  20  442...IRFDNVPLV--TPNGDV-LIERLNFEVPSGTNVLVCGPNGCGKS----SLFRVLGELWPLFGGTLTKPAKG---------------KLFYVPQRPYMTLG---TLRDQII-----YPDRPLDMIRKGVSDSDLEQMLENVQLTHILERVQDWMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGAMYRLCREK----NITLFTVSH................................................................................................................. 627
73 -16.600[I] KOG0064 Peroxisomal long-chain acyl-CoA transporter, ABC superfamily  ali follow..  19  505...ISLRAVPVV--TPNCDI-VVPKLTLCIEPGVHLLITGPNGCGKS----SLFRILSGLWPIYAGEL-----------HIPRPVKDVPCMFYIPQRPYMSIG---SLCDQII-----YPDTREDMKRKHITENELRSILKMVSLEHIAQRVRDWKDILSGGEKQRMAIARLFYHRPRYALLDECTSAVSIDVESSIYEIAKGM----GITLLTITHRPTLWKYHTHILEFDGLGN.............................................................................................. 712
74 -16.500[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains  ali follow..  21  324..VIEVQNLTKSY----GDRTLIDDLSFSIPKGAIVGIIGANGAGKSTLFRMLSGQ-PDSGSVTMGETV--------------------VLASVDQF-RDSMDDKKTVWEEVSDILTIGNFEIPSRAYVGRFNFKGVDQQKRVG-------------ELSGGERGRLHLAKLLQRGGNVLLLDEPTNDLDV----ETLRALENAILEFPGCAMVISHDRWFLDRIATHILDY.................................................................................................. 515
75 -11.900[L] COG0419 ATPase involved in DNA repair  ali follow..  15  474.........................................................................KTTGKANEDLGKYAKALDVAIMQLHSMKMNEINRIVDELWKQTYCGTDIDTILIRSDSEGKGNRTYNYRVCMVKGDAELDM-RGRCSAGQK-RLALAECLGVNCGILALDEPTTNLD-SLAKNLSRIVEFRRKQANFQLIVITHDEQFIRLVNSDAYCSYYYRVVRFANTVIVLT.................................................................................. 666
FFAS is supported by the NIH grant R01-GM087218-01
8 3 0 0 9   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Ginalski K, Grishin NV, Godzik A., Rychlewski L. Practical lessons from protein structure prediction. Nucleic Acids Res. 2005 Apr 1;33(6):1874-91.