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Query: gi|29345420|ref|NP_808923.1| hypothetical protein BT_0010 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in PfamA30U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSTSEKRKGMQTDMPELQAMISQRIQEQNYREVLKGVTAFPWCTDDPCVFRTAAGNLWIAVGHVNRKSEVPKFSYKNFLCAYLLGNAEDGVAAYLDLQAAAWKGVELVMFSSHADGLSALYGDGRANDRDLLYRFFGRNYVFAVGFRKKEEKEQASAGDKIFIASVDAVGFGEIDKDGKLAVINKIMSYEQFFDDEDLKPMWGALAVKLFILKCNGYRESAKDRKALDILLHDMMKLCKSMELTAGLDDQKRKHPESAGINPQMALLKNEAMVKVHNGMDEKVKSNLPLLEWAVNHLPAKLLQEFGTFVESVPQIKEPTAYDNLMSLESVLKEMDRLFKKAAEEENLSLTKNSMTDGLast
1 -6.550PF14878.4; J9E9T8_WUCBA/29-133; Death-like domain of SPT6  ali follow..  17  3.......................................................................................................................................................................................................................................................LDGSRVHPETYEWARKMAALEIDDAADPTSALEEILQNPDKLKDLDLDAFAEELARQGF-------GNKSITLYDIRAELNHRYKDLRVPYESPSAERIFTMLTKETS.. 105
2 -5.980PF02341.13; K9VR84_9CYAN/1-111; RbcX protein  ali follow..  4...............................................................................................................................................................................................................................................................KQVAKDTAKVLASYLTYQSVRMVVAQLSETNPPLAIWLNDFSSKGKIQDGEAYIQELLLENQDLGFRIMTVREYLAHDLPEMVRTNIQQANMEHRRQHLER. 108
3 -5.700PF01625.19; R7JJV5_9BACT/151-301; Peptide methionine sulfoxide reductase  ali follow..  18  10.........................................WGVE--YMLGKVDGVKSIRSGYIGGHTENPTYE----VCSHKTGHAE--VEVEFDPSKVSYETLARLFFEIHDPTQLDGQGPD-----------LGDQYRSEIFYTTPEQKEVAER----LIRILKEKGYSVVTDVTPASRFWPAEQYHQNYYNRK................................................................................................................................................................ 144
4 -5.540PF14074.4; A8FGG1_BACP2/36-115; Protein of unknown function (DUF4257 topsan)  ali follow..  18  2................................................IIACAIGGVMGILGHVKKKGRLPRMTKKFIYLGFIEDWLVGMIAATLLVLSSNPESSLHLVILSIISGYGG.............................................................................................................................................................................................................................................. 74
5 -5.480PF05195.14; Q75CD7_ASHGO/66-188; Aminopeptidase P, N-terminal domain  ali follow..  18  20..........................................................IVGAELKYASGPVFYPFQQ----YLTGWLEPDTIMVLEKPTADPSDVILHMFVPRRDALVEAW-DGPRSGPDGAREIFNADESMEINKAREGLTHILKRCDSVY................................................................................................................................................................................................... 123
6 -5.400PF04593.12; SEPP1_HUMAN/251-381; Selenoprotein P, C terminal region  ali follow..  16  3.........................................................................................................................................................................................................................................................HRQGHPENRDMPASEDL-KKLCRKRCINQLLCKLPTDSELAPRSCCHCRHLIFEKTGSAITQCKENLPSLCSQGLRAEENITESCQRLPPAAQISQQLIPTEASASR. 112
7 -5.310PF08779.8; NS7A_CVHSA/16-99; SARS coronavirus X4 like  ali follow..  25  4............................HYQECVRGTTVL---LKEPCPSGTYEGNSPFHPLADNKFALTCTSTHFAFACA-------DGTRHTYQLRA---RSVSPKLFIRQEEVQQELYS........................................................................................................................................................................................................................................... 84
8 -5.270PF09902.7; X2GIB6_9BACI/4-73; Uncharacterized protein conserved in bacteria (DUF2129 topsan)  ali follow..  20  4................................................................................................................................................................................................................................................................................................LIVYVHQLKHAKSLRKYGHVHYISRKQKYVVLYCDREDIEMMTIKLQRL.................... 52
9 -5.260PF11212.6; Q5E7T4_VIBF1/1-82; Protein of unknown function (DUF2999 topsan)  ali follow..  27  1...................................................................................................................................................................................................................................................................MNPIIQTLKE------HNVSDEQI-----------AEVFQTLTQNPFAAMATIQSLGIPQ--EKLQPLMMLVMSNPALIKEAVEELGLDFSK...... 73
10 -5.250PF00888.20; V2X7L1_MONRO/27-682; Cullin family  ali follow..  14  147................LNQVEFEREGYMINRSAVKGCVEV---EQGSSVYKRELEPVILEESAKFYRNLAQNLLDTCDAPQYLFMSEESRTHYYLSRQTAV-QILLNHLLSAHLSGLDPMIDNDRIEDLARLYKLYTLVPQGLPCLKKALKKSIAWRGKDINQSSLGGEVTQEASEDIDRVKDTAKATAKAKSFSSGAQTLASALKWVQDVLDLESFQGDRELEGALNEAFGAFINSNKSSEFISLFIDDHLKRGLKGKTDADVDIVLEKTITVFRYLTEKDV-----FERYYKSHLAKRLLLGRSVSDDALAKLKIECGYQFTQKLEGMFHDMKKQKVALYPPTPVEISVIVMTST 523

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.