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Query: gi|11497100|ref|NP_051177.1| hypothetical protein (BB_P16) [Borrelia burgdorferi B31], from B.burgdorferi

Results of FFAS03 search in PfamA26U
Master-slave alignment does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTSNKKIANNAANKIDINNKITNNHDIEKKKIKEKINDIEKKEIREITRIIRDVITQIFALFGADNFLVLFPRMDLKGFGYIPQLFFIKPKNELITRTYNTSCSKRPVINYYDRKAEYVSYNPVMTGEHISLNGGILTSLYKDMISLLKMTVFGNTMLRFDAHLVKEQLANRIQAQVPFSIYSPTFGLKELAVITSLSFKDTPFIDEVEVSLSIEIVKTFALEKYKGLast
1 -132.000PF05632.6; Q5XYW8_BORGA/15-227; Borrelia burgdorferi protein of unknown function (DUF792 topsan)  ali follow..  90  1..............INIKNKNIINNNLEKKKFEEKIKDFEKKEFREITRIIRDVITQIFALFGADNFLVLFPRMDLKGFGYVPQLFFIKPKTELITRTYNTSCSKRPVINYYDRKAEYVSYNPVMTGENISLNGGILTSLYKDMLSLLKMTVFGNTMLRFDAHLAKEQLANRIQAQVPFSIYSPTFGLKELAVITSLSFKDIPFIDEVEVSLSMEIVKTFELEKYKG 213
2 -6.690PF04183.7; Q4H460_VIBHO/131-385; IucA / IucC family  ali follow..  35................................................................................FAPELCWIAVNHTLVTGAISEYLNWNHLYQNALSDDDLASVRCDLEMLGLNPANFLLLPVHPWQWD----------------NKLSLLFVAELARKEMVYLGTFGDAFLPQLSLRTLTNVSRPARYDIKLPLTIMNTSCYR...... 165
3 -6.470PF03300.8; MP_MSTV/1-283; Tenuivirus non-structural protein NS4  ali follow..  20  6.....................................................................................LFSRSNGKVLVDDLSEEGQKR--LDLANNKKKLLSARPLTKGRMSIDQAATVLGLEPFSFADIKVN-------KYDMFTAKQDYSIKANRVATFCIYYPFFRIATFAMVTTLKIIDKSYVDQVEVEVTYPICKNFAV..... 159
4 -6.200PF12249.3; Q745L8_MYCPA/520-694; Arabinofuranosyltransferase A C terminal  ali follow..  15  1.....DIPDVLRPDLTIAYTDTDGHGQRGDRRPPSAEKFYASIDDVITRETGRPRDQTVVMTADYSFLSFYPYWGFQGL---------------------TSHYANPLAQFDLRAAQIDKWSKLKTAD--------------ELLHALDTCPWPPP----TVFLMRHGANNTYTLRLAEDVYPNQPNVRRYTVELRAALFDSPRFAVHRVGPFVLAVRK........ 175
5 -5.480PF10073.4; Y1691_BRUO2/12-85; Uncharacterized protein conserved in bacteria (DUF2312 topsan)  ali follow..  18  14...............................................................................................................................ERLEEEKKTIGDDIKEVYAELKGSGFDSKVVRTIIRLRKKEDHERQEEEAMLQLYMDALGM....................................... 74
6 -5.260PF00576.16; HIUH_RALSO/2-116; HIUase/Transthyretin family  ali follow..  22  58...................................................................................................................................................................................GIYELDFAVGDYYRAAGVSLPDPAFLDVVTLRFGVALVSPWSYSTYRG 115
7 -5.160PF12869.2; Q3ZZ62_DEHSC/1-172; tRNA_anti-like  ali follow..  15  61....................................................................................................ISVTAEKMYQDYNSNI--ESANDYYIDKRIKVEGRLAEDMGEYWIKLETSSGSANILCYFSPAYQLIGAEVQSMIGQLVTISGVCTGMQGGLVVLKPSFSCDLPIEQGSV................. 172
8 -4.990PF14366.1; B8DJ08_DESVM/48-143; Domain of unknown function (DUF4410 topsan)  ali follow..  20  5.......................................................................................................................GYVFGKKDEKFSLPDTMSVSLKNALTQESMASDQGRLVI-----------NTRILAYEPGNAFTPGAGATKLSTESDVCAPDGKVLAKIPVERSI............. 92
9 -4.960PF12410.3; Q9Q941_9POXV/15-150; Poxvirus DNA dependent RNA polymerase 30kDa subunit  ali follow..  19  33....KNIINTKSNIEETKFEPKNNIGIEYSKDVKNKLSYRNKPSIATNTQYEDICNMIKTANGTEKEILRHALFAIK...................................................................................................................................................... 105
10 -4.880PF04874.9; Q9C2F7_NEUCR/141-235; Mak16 protein C-terminal region  ali follow..  24.........................................................................................................................................RTIERELLERLRQGMYGDQPLNCSESVWKKGIEDEDEEDEEEEELEEEIEDGNVEYVSDFEETDDELND..................... 92

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Grynberg M, Topczewski J, Godzik A., Paszewski A. The Aspergillus nidulans cysA gene encodes a novel type of serine O-acetyltransferase which is homologous to homoserine O-acetyltransferases. Microbiology. 2000 Oct;146 ( Pt 10):2695-703.