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403763
Query: MJ3176S NP_906312.1 403763 Selected-2009-06-20, from JCSG0709

Results of FFAS03 search in b.thetaiotaomicron
Master-slave alignment does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKILFLSHLDMNLYLFRRPIMEALRKEGHEVIAMCPKGEYFDRFKELGIKAISYEISRESLNPFKELKTLLSIAQKLSELKPDILHTFMLKPNIYGTLASKIASIPYVICSVTGLGSFYIEESFKSRAIRYLIETLSRIVFKIAKKVVFQNEDDRQLFIQKGLVESSKTHLIKGSGINTKLFDPALISPSTLVRYRQELGLEKKHVVLMVARAIAHKGVREYYEAARLLGAFTSDSHLAFLFVGDTDEGNPSCVSSKELYSPHVLWLGHREDILELMALCDIFVLPSYREGIPRTLLEASSLAKPMVTSLAVGCKEVVKEGENGFLVPVGDTKALAQKIHYLVQNPALRLSMGEKARQIAQKEFDVSIIVKAHLELYKEVRGDLQKTLLast
1 -74.000gi|29345804|ref|NP_809307.1| capsular polysaccharide biosynthesis glycosyltransferase BT_0394 [Bacteroides thetaiotaomicron VPI-5482]  ali   30  4KRILFLANHFITLYSFRKEMIKEMVKKGHELYLSLPKSEENKYFEDLGCHIVETEIDRRGVNPMKDLKLIYFYKKMIPLVNPDIIFSYTIKPNIYGTIASNGKYK--QVCNITGTGETFLKRS----IVSTICKVLYKLSIKKCYKVFFQNTGDRDFFIKEGLIRENY-AMLPGSGCNLQQHVFMPLPE------------GDEIRFLFIGRVMKLKGIDQYLQAAEIVKKKYPNTKFYIAGWNE--QLEYMKLVEEAQKTGSVEYIGFRKDIDQWIEKCHCTILPSGGEGVPNVLLESSATGRICIGSKINGTMDVIDDGKTGYLFNTGDGEDLARQIEKFIQSPEEKASMGKVAREKVEREFDRQIVVKAYLDEVTKC........ 364
2 -67.800gi|29346754|ref|NP_810257.1| putative glycosyltransferase BT_1344 [Bacteroides thetaiotaomicron VPI-5482]  ali   13  3INSVYLVSRKSGPTNQALNLLSGFDKKRVNAVIVTLSEEDSFSSMHKEFIEKGIEVVQLKRKKWNLFFALFDVVKLVKERNIQLVHSSGLRPDILNILLWNQ-NVKKCTTQRC------DPKDILNFYSSTIVSFIYVLVVRRFHRIIACSEALSRILHEKY----NLKTTFVRNGVDTTIYYP--LSRDEKIALRSKYNIPEKRIYVVLGSLIHRKNVLHIIKSFHLIHN--DDVHLLIVGGGPLQKE-----LEEKAAGLNITFTGNVAIPLPYIQMSDIMISASLAEGLPNSVLEGLACGLPILFSDITPHQEIYRDTAIGELFSNDKVEYLVEAVQKTFKWDL--EEKKRVVRDMVETNFSKYVTARAYEDQYISLISE..... 367
3 -66.900gi|29348273|ref|NP_811776.1| putative glycosyltransferase involved in lipopolysaccharide biosynthesis BT_2864 [Bacteroides thetaiotaomicron VPI-5482]  ali   17  1MRILQIGKFYGGIEKVMYDITMGLSQRQVYCDMLCASAEPENLLLNDYARILCVSTWKKVAATMLSPAMIFRLRKINK--EYDIIHIHHPDPMACLALFLSGYKGPVVLHWHS--------DILKQKMLLKLYSPLQNWLLRRAKVIVGTTPVYVQESPFLENIQRK--VISVPIGIDEMKPVPGRVA-------QIKERYAGKKIIFSLGRLVEYKGYEYLIKASQKLN---DDYIILIGGKGPLQ-EYLQSLIDELGVRKKVKLLGFIKDLPDYFGACDLFCLSSIWEAFGIVQIEAMSCGKPVIAMNISGVSWVNINRFSGINVKPEDADALAEAITAVLTDECLYEELARGARRRYETMFTKELMTELCLNLYSGVLDSSETD. 376
4 -66.500gi|29345465|ref|NP_808968.1| putative glycosyltransferase BT_0055 [Bacteroides thetaiotaomicron VPI-5482]  ali   18  1MKILHLGKFYGGMEKAILDIVRGISMQGVTCDLLCVSTEKAGVFPNEHAHIYAMPSVCNVNSVRISPLLIPTLRKLCP--NYDIIHIHCPNPMANLALYLSGYRGKVVLHWHSDI--------LKQKYALKLYKPLQTWLIRRADVIIGTSPVYLENSPFLRGMEHK--FRIVPLGCEAIVPSADRVSDIRKQY-------KGKRIIFALGRLIAYKGFRFLIEAARYLD---DGYVVLIGGTGPLY-NKLLKQINEENLQGKVCLLGYVDEVAQYYGACDVFCLSSVWEAFGLVQIEAMSCGKPVVATNISGVPWVNRNGYSGLNVEPENPEALAKAIMKITSSEEAYRTYSRQARAHYNKMFVKERMLAGYEQVYASLYHEK.... 371
5 -66.100gi|29348355|ref|NP_811858.1| putative glycosyltransferase BT_2946 [Bacteroides thetaiotaomicron VPI-5482]  ali   16  1MRVLIINERIGGAAVAAGRLMESLKNNGIKAKMLVRDKQTDQILHVWKFMWERIVFKKNDLFAVDIANTGTDITSLPEFQQADVIHLHWINQGMLSLNTIRKIGKPVVWTMHDHHCPYIYGGGGKKDLSTRIFRKKKEIYSQASITFVGCSRWLAEKAKVSGLLTGQT-VISIPNAINTNLFKPH-----NKQEARRKCRLPQEILFGSVKITDKRKGIDYLIEACKLLAEKHPEWKESLGVVVFGNQS-QQLQDLIPFRVYPLPYIKNEHELVDIYNAVDLFAIPSLEENLPNMVMEAMSCGVPCVGFNTGGIPEMIDHLHNGYVAQRKSSEDLANGIHWVLTEPEYAELSAQACRKAI-GNYSESIIAKKYTEVYNKITGKY.... 420
6 -62.300gi|29348275|ref|NP_811778.1| putative glycosyltransferase BT_2866 [Bacteroides thetaiotaomicron VPI-5482]  ali   18  1MKIVYCIAGTGGMERVLANKANYLVSHGYEVVIITTDQREKQSFFEQRINCCDLRINYEENYPFKQWKHRKRLTACLKQLKADIVVSMFCND--ASFLWKIDDGSKKVLEIHFSYKRLQYGRKGVWKIADRWRSRMDERTVRKYDRFVVLTAEDKAYWGNL------SNMIVIPNALSHSTTELHLSP-------------LTARKVIAIGRYGYQKGFDYLIEAWEIIHCAQPAWTLDIIGDGEWT-DRLQRQIKRKRLNHCVFLKPPTGQIEEEYRQASLLVLSSRYEGLPMVLLEAQSFGLPIVSFACCGPGDVITDGKNGFLVSVGNLPMLADRIMRLMEDEGLRKRMGMNAYHNS-KTFSEERIMQCWIDMFDKLVSQR.... 379
7 -59.600gi|29346590|ref|NP_810093.1| putative glycosyltransferase BT_1180 [Bacteroides thetaiotaomicron VPI-5482]  ali   20  1MKIAYYLPSLGGIERIVTFKANYFAEHGYDITIITSEQMGKAPHFPPKVKHIDLGVSKVLKYPFRYYRFKQRLSNLLNELKPDITISTMRRENFITKLKDGSLKIGEFHVSRYAYGEALKRKSPIVNMIKKRWANRFVKNLSKLSRVIILTSEGAKDWPEL------TNISIIPNPISTPVEGKQTD--------------ILSHNAIAVGRYAPQKGFDMLIPAWSIVAQRHPDWKLHIYGEGDLK-EKFTKLIDELQLNNNCLLHHTVSNIAEKYCMSSIFVLSSRYEGFGLVLAEAMSCGIPCVSFDCHGPSNIIKDHEDGLLVEKENIKELADKICYLIENENVRIKMGHKARENV-KRFLPENVMPQWKNLFESLTYSSK... 384
8 -58.100gi|29349690|ref|NP_813193.1| glycosyltransferase BT_4282 [Bacteroides thetaiotaomicron VPI-5482]  ali   15  2IEKNVVILRPSGVVRYIQMLTEGMKHNGIKVHIICLNTSLIFPKFEEDRIIANIPYPSKSKPLRNEIVVSDLISPYFKNRKQLIWHVQELLLVKLADILKLSLGGHILTHLHISLFKKQYSQWLNNTFNLINENQLEKIAYPLSDRIICVSYSAMKHIISAYGIHPDK-ISVIYNGMDDTGITLQERK-------------SRTPEILFVGRISREKGVICLLNALNKVASRGYFCKLKLVGQCT---GYMSSHIRKAYKQLKIDILGTVNELKELYTTNTIGVIPSLHEQCSYVAIEMSMFGMPMIVSDVDALSEMFEDEVNALRIPELDEEKLADAIIRLIDDEALRLKLSTNAIKNYQERFTLEKMIENTINVYEQLIEQDN... 407
9 -57.600gi|29345463|ref|NP_808966.1| glycosyltransferase BT_0053 [Bacteroides thetaiotaomicron VPI-5482]  ali   20  1MRIVYCISGTGGMERVLSNKANYLAAHGYEVTIVTTDQRGRRPFFDGRIECVDLDVNYETNNPFKQLKHKRRLTKVLNLIKPDITVSMF--CNDVAFLPSIQDGSKKVLEVHFSFKRLQYDRKGLWRLADKWRNRNEQRQVACFDKFVVLTHEDKDYWEG------HANIEVIPNAQTFACDVPAA---------------LESKTVVAVGRYTYQKGFDMLLRAWRRVCDSIDDWQLHIVGEGEMK-ESLQQQILDLSLEDRVELCPATSDIQSVYREASVLVLSSRYEGFGMVLLEAQTAGVPTVSFDCCGPSDIVADGVTGYLVPANDIPALAEKLLVLMRDETLRKQMGRNAFADA-SRFSEKAVMQRWTDLFENF........ 373
10 -57.000gi|29348345|ref|NP_811848.1| putative glycosyltransferase BT_2936 [Bacteroides thetaiotaomicron VPI-5482]  ali   17  1MHILILPMYYPHRGYMFFEQAMQLAKSGCKVGLAFTEQRPLKNFTWKRLHAWNPKLSTRAGGIIWSLLTVLLVRKYIRTYRPDLIHAHFGTWGYAARLVYKWYKVPYVITEHA--------SSINGNQTTPSQAVILKKAYSEARKIICVGTKLKRSLCAYVS--DPDKVTVIPNFVDTNTFAFSPHRTEK----------KKHFTFISIGNLNKRKGFWDLLTAFHWAFKDMPHVSLIIAGDGE-EMQPLKKLIQSLHLQEQVKLTGRLEELSGLLGTCDAFVLASFAETFGIVFIEAMATGLPAIGTICGGPEDII-TPESGFLIRPGDVDALAAKMKTLYDTYESFDKE--KIRQSIVSRFDFQLAGQKLRQVYSEALEMSKPP. 394
11 -56.800gi|29348778|ref|NP_812281.1| putative glycosyltransferase BT_3369 [Bacteroides thetaiotaomicron VPI-5482]  ali   15  4ENIAFVVVRYGGAEYHCRMLAERLTN-DYNVEVLTTCVDNYRTGENNKVIVRRFKTNPTHPELENFYSYFFPIWHFKEKEELEALGSQVFHSPALFNFIKEPITIDYSHVYYTTLYAPEKT-IPTMHYHKTAFRSTLTQVFTKAAYIAFNTTAEQKLARKIFGMHMAP-HSIVSVGIELSAPSDW-------AVTQEKYNLPDE-YMLYVGRVDQGKLNNVYTYFLN-YKKVYPNSDLKFVLVGKQ--------YSDPFNHPDIIYTNFVQEKISIIQHAKIVINPSLYESLSLILLEAMALKKAMLVNGNCNVLKEHCHKSNNAALYYTNEKSFIDKLHMLDSSTNLRLEMGEKGYSYVNSNYDWNIIMNKLKHVIENI........ 413
12 -56.700gi|29348347|ref|NP_811850.1| putative glycosyltransferase BT_2938 [Bacteroides thetaiotaomicron VPI-5482]  ali   14  1MKVLFTF---GGIPHYLNAMLNRLQAKGVEITVVSPKKGNTT--IGKGVKMVEGGTYKHLTTPEKKMSAFPALPEIIAEEKPDIVVVGWPYFLQVFFQPALIREIPFQTPPYGKIKEYFKAKGIGFYLRQWITARIRKYCYAQAAGTLNYSTAAYDILPSYGV--KKEQIHVTYNSTDTEALLK-----EKESVLASPSILPCDRRLLHIGRLVKWKRVDLLIEAFRKVATDYPEAELVIVGDGP-ELDNLRQQANDLQLADSIRFIGAVYDLGAYMNESSIYVLAGM---GGLSINDAMTYGMPVLCAVCDSTEDLVMEGKNGYFFKDGDADSLAGRIREMFESPERCKEMGKESERMIREKINMETVSERYLKAFQEILRLTHLR. 404
13 -55.800gi|29346018|ref|NP_809521.1| glycosyltransferase BT_0608 [Bacteroides thetaiotaomicron VPI-5482]  ali   15  1.......................MVNQGVDISVIAPQSIGNRSYHIYRPKYLTLGNAPRWIQNILEWLRYKVILRVITKHKPDAIYGHFWQNAFDIRKYCYKNGTPLFVACGEG-------DTALEDLVNSLSFAEKKRLSNAVTGVISVSSLNKRKCIEYGLSKAED-IVVLPNSVNSSLFSDIN------PLNRNSLGVFDDFLIVFTGGFIHRKGASRLAAAIDKIGD--KRIKVIFIGKPVPGDDATP-------HCNGIVHIGALDDIPSYLSAADVFCLPTLNEGCSNAIVEAIACGLPIISSNLPFNDDIL-DSSNALLVNPESVDDIASAIKQLMDNSDLRQKLAEGSKEKA-KSLRIEFRAKKIIEFINRQMQK..... 359
14 -55.800gi|29349712|ref|NP_813215.1| putative glycosyltransferase BT_4304 [Bacteroides thetaiotaomicron VPI-5482]  ali   16  1MKVLMFGWEFGGLGTASYGLTKGMSQQDDLEITFCIPKPWGDELNTNDLGCIEFSGRYPDNLHEEINNYSIVAGVVARQQEFDIIHSHDWLTYPAGIHAKQVSGKPLVIHVHA------TDFDRSRGNVNPTVYAIEKNGMDNADHIMCVSELTRQTVIHKYFQDPKK-VSTVHNAVSPLSQEIQDIVPQKN---------PSEKVVTFLGRITMQKGPEYFVEAAAMVLHRTRNVRFVMAGSGDMM-DQMIRLVAERGIADRFHFPGFMKQVYEVLKASDVYIMPSVSEPFGISPLEAMQCSVPSIISKQSGCAEIL---DKCIKTDYWDIHAMADAIYSICTYPAMYEYLKEEGKKEV-DEIKWENVGYKVRGIYDEVIKNYGKQ. 424
15 -55.300gi|29345801|ref|NP_809304.1| putative protein involved in capsular polysaccharide biosynthesis BT_0391 [Bacteroides thetaiotaomicron VPI-5482]  ali   13  3.NILFILPSYGGTMTSFKNLLLLVHS-DYNISVKAVNEGDAYDFIGKYANVLDKRKPQSKIGIDLAPMMLKRMANRLDCSNYDAVIGFQ--EGYATYFVSQTNAKVKIAWIHSIYSR-----------LIGLESKTNIKSYNNIDKIVCVSNTAKNDFIRTDPSQKSK-LHMVMNGLDVNQVKNQSECKIPEKR-------HDSIDVISVGRIDPIKRFSKIPSITDEIRKKGLNITWHIVGGIADEYELLQSEIKKYHLEESVILAGQYPNPYPYIKRSRLLGCLSSSETFNYTLAEARTLGVPVVTTDFPAAQEFVDNGVNGFITPIEQ---IGNVIFDLLSHPNKYQAAKESISH---YEYNNAIVKEQFKSLLNNV........ 383
16 -54.300gi|29348777|ref|NP_812280.1| putative glycosyltransferase BT_3368 [Bacteroides thetaiotaomicron VPI-5482]  ali   15  1...................MLAERLVSDYDVEVLTTCVRDVATGENIGVVIRRFRTNPVQREKERYFALNDYIRDHIDEYKAFIAMSSDYVTFYYTALYAG-RKTIAIPTMHN---------------MGISFRSVLTSAFSKIAYVGFNTGEEQRLAENILGKALGA-HGILSVGIEESLSADW-------AMTKEKFQLPEK-YLLYIGRITPKKIHR-LLTYFVNYKKKYSDSTLRLVLVGG--------LAMERFEHPDVIYTGFVEEKMSILQHADIVVNPSRYESLSLILLEAMSQKRPMLVNGHCKVLKEHCLKSDFASFYYMNNRGFNQALRRIEQSEDLREEMGEKGVFYVKSNYNWTLIMGRLKQAIKSI........ 387
17 -54.200gi|29347122|ref|NP_810625.1| glycosyltransferase BT_1712 [Bacteroides thetaiotaomicron VPI-5482]  ali   14  4VDIIHGGWLKNGASSVLRTLAESTSKYGIQLSVYSMDLIVLKSFENIA-ANSILAFISIYAIYLRHARKIVKYYFDQGLEESRILFIHDIFTCYYLKYRSRRQKTVLVLHNNGDTFNMLRQPVLNKSRLYSILLYIERKVLSEVDKVLFVAENPKDTFVQLHPDIPIEKVGFVYNGILSKEMHICPEKH------------LGPLEICCVGSVSKRKGQDMIVEALVKMSPVQEKVHFTIVGDGTLR-GELEKLCFEKGISKYIDFIGVSNQVENYLLRSDIFMLPSRDEGFPISILEAMRAGLPIISTNIAGIPEMVFSGINGIVISP-CLEDIYDILCHI--ESYNWSAMGKLSYELYQQKFTLDSMIESYANILNAI........ 392
18 -53.500gi|29346762|ref|NP_810265.1| putative glycosyltransferase BT_1352 [Bacteroides thetaiotaomicron VPI-5482]  ali   16  1MNILFIDNLEGGISRVISCLASSLKENYGFVVSHAAEKFDKHKQTELDIILKDDQSYIPILRQFRPTYCVGIINKAKADLKCKYIIEYHSTPFYARKDKKFAFKRLLRYDIKQRYSIKLLLFPLWYHLSYLRVSKLWKRNYINADKYILLSNNYIDDFVNEFNIIDASKLLAINNPLSYKEFLPISRLQ------------NKQKRVLIVSRLWNYKRIDMSLEIWKLIEEQVGDWELRIIGDGPEE-EYLRRLVCRYNLKR-VVFVGNT-EPKEEYEKASLFISNSAIDGWMITLTEAQQMGTPLVMDSYKAVYQIITNHEDGIIIQNNNVDEFAIQLLTLMKNDVKREEMAKAAIKNS-KRFAVENIVAQWVELFQELTLNK.... 389
19 -53.300gi|29346019|ref|NP_809522.1| glycosyltransferase BT_0609 [Bacteroides thetaiotaomicron VPI-5482]  ali   12  1MKYLLV-DLSGKVDNYDKALYQALEKELSNEKSSIQIPGHGLIRLIPNKFSQTEFIVKRLIKALEGGINYIYLLLHVAFKKIDTIHFQWLEKYILYLLHVLSPQTKVILTIHN---IYPHGVKSMSDSGKQKYKKRFRDTCRNIDNIIVHTESSKMEVIKEFDFVPDI-ISIVHHGVFIPKIRIS----------KKEFLQKNKYVILQFGLQTYYKGTDILVDAVNLLPAEYSEIETRIVGGVG---ESYLQELKGKDSNSLIHWKSSNDELYEEINNSDVLVLPYREISQSGVLLLSIYFEKNIICSDLPSFVETIHGDQDNFFFKNNDPSSLCELLMRYIDSNINNEKIQYRIKHLK-NLYSWENAAKATISIYRK......... 379
20 -53.000gi|29348776|ref|NP_812279.1| putative glycosyltransferase BT_3367 [Bacteroides thetaiotaomicron VPI-5482]  ali   14  1...................MLAERLVNDYDVEVLTTCVKNYVTGDNEGVLVRRFYSDPVEPDLHKSYVRQASMYAFIRENSYRAFIPLSFFPHTYYTALYAPEKTILIPTMHN---------------NGSSFRSIITSVFSEVAYIGFNIEAEQKLVENIVGKPLAA-HGIISVGIEKTKAADW-------EQTKVKYNLPED-YLLYVGRIDAIKLNN-IVDYFLSYKKKYVGSRLKLVLVGG--------IFGKTVEHPDIIYTGFVAEKVAIQLNAKVIVNPSRYESLSLILLETMSEGKAMLVNGRCNVLREHCEKSNYAALYYMNRRDFMRKLHNLENSETLRQQMGEKGRHYVQENYNWEMIIGRMKNVIQML........ 386
21 -52.600gi|29349688|ref|NP_813191.1| putative glycosyltransferase BT_4280 [Bacteroides thetaiotaomicron VPI-5482]  ali   15  1MNIAFLSSSNNNWSGTLYSLYTSL-QKKHRVIWVGETVF-----EVWEFHKANFKNNETFFPENYALLFGKLFSDLLKKECYDVIICRDYFF-----AAYLVSDIPLIYIGDTTFHLFNQYMNWQDKSLTKLAEQLESLAIQKVDKIIYCSEWAKQSAMQDYNADAEN-IEVVEFGANITENIPIP---------DNVSPINAPCNLLFIGRNWNMKGGNKVLEIYHNLKGRGFQCTLTIVGSEPPMSLPNDPNIE---IYPFIDKTNSNDKFHEILTRSHFLILPTRFDCFGIVFCEACAYGIPSLGTNVGGVSQVIKERENGFLFNIDSSLEYADKIEEIFNNHITYSKLRKTARKDFEERLNWDIWLDKSNKIIEQLASEHQPD. 371
22 -52.000gi|29347558|ref|NP_811061.1| glycosyltransferase BT_2148 [Bacteroides thetaiotaomicron VPI-5482]  ali   15  1MNITIVLGDKGGTQRVMWYLGKELNKRGHKVTFIAGKGSSCPFAK------------------VIELDPSVNLNTQIPT-DADIVHFNIP--------VPEGITKPHLLTIHG-----------------------NGIPANADRNIVFVSRNHAQRL---------GSESFVYNGLDWDDYGPANLTL------------SRKNYHFLGKAAWKVKNIKGAIAVVQSI----KNAQLDVLGGYRLN----LKMGFRFTWNPRIHFHGMVSKKKVIIEQSKGLIFPVWHEPFGLAITESLYFGAPVFGTPYGALPELVSPE-VGFLTA--HGQEMAEHIQSAQYSPK-------VCHEYARDLFNSSVMAEAYLKKYETVLNGEPLN. 307
23 -50.800gi|29345802|ref|NP_809305.1| lipopolysaccharide biosynthesis RfbU-related protein BT_0392 [Bacteroides thetaiotaomicron VPI-5482]  ali   12  1MKVLYLGPDKNAAAQRVVANAKLLREMGFEVSFIGISKDIKNALAVDGFVSTPVPYPIGIKQWIHQI-CTFISIKIILGRKPDYVVLYNFPAIASLKILKACHKHGIKVVHDLTEWESNNRWSPSDMMRKIDINLRMRYCVKKMDGVIAISRYLYDYYKKY------TNTILVPPTVDLTAGKW-----------NRQRELSAGDKIKLVYAGSAGFGVKDRLDTIAKAIVKFPNMQFDVIGMTEGQY--VSGYGELPKDCKNILFHGRLTETVKAVQDADFQFLIRDNAGFPTKFVESITCCTPVIATLTSNISDYLKDGKNGFVVDDSHLDDVFGLISKLSPSE--IIQMKEACKN--CTVFDYREYRNSFEQIFK.......... 368
24 -50.600gi|29345881|ref|NP_809384.1| glycosyltransferase BT_0471 [Bacteroides thetaiotaomicron VPI-5482]  ali   1MKYLITLPWMDGGKQGSFNMLMELQN-MIDITLIYPVFFKKQMACQYLLETRKFLKQPYLATPIYKDAYIDFVNEIIKKERIDIVQNEYFEQLYM--VYAIPNTVKKVFIQHEIQYIAKERLIQQREYLATMQRIQEINALNEYDQVITMTDIDKNILMCDG---VRAPISASPSFIPLPDNIAYKEC--------------ERSSICFIGGSGHNPNLNGVTNVWSLILKENPNFTFKIIGKWDEK-----IKTEYQKKYRNLFFCGFVDNLAMVISECIMVIPILIGSGIRMKILESVNFYSPFVTTTVGVEGLDFINGKECIIA--DEPQAFATGVLKIATDKVLQHNLTKAAHEKLMEMYSPEASVQRRLNIYNEMLKR..... 404
25 -49.700gi|29346020|ref|NP_809523.1| lipopolysaccharide biosynthesis protein, putative glycosyltransferase BT_0610 [Bacteroides thetaiotaomicron VPI-5482]  ali   13  1MKIALLTQYYGAPQNRLYEMIHGLKECGNEVCIITGRGKITCTDQIDGVEIKRYWL-PRIWNMVSFSFMVLFSLRYLKSKQLDYLIVESLTLGLVGKWLAKHAHCKFIANISD--LSAKELGAISEGKLYHILENLEHRIYKGAYISMGQSQEIVDHIASHG----GNKTYLFRNGVDPTRFAD----------IKVHKINDGKVRLVYAGLLGFAQGVADICKSINFAE---MGMEFHIYGSGG-EQKEIEAFIASHPN-NGIIYHGVVEELPFRLKEADMTLIPLVKNIYGAVIYDSMAAALPIMFVGEGEGARIVKDNNIGLVAHSKDYEGLKDNIKYAVSHPEEMKVMAKNCVDCAENKFNRPKQILCLNDYLKDNLK...... 396
26 -49.300gi|29348274|ref|NP_811777.1| putative glucose transferase BT_2865 [Bacteroides thetaiotaomicron VPI-5482]  ali   11  6KTIVVSAVRKGGTLTILQDCLCYLSALAADGNYRVIALVHKRELADPHIEYIEMPDVIKGWG--RLWCEYVTMYKLSQKIMPVYLWLS------LHDATPRVVAERRVVYCQTSFPFYKWSFDYKIVLFALFTRWIYRINVHRNTYLIVQQEWLRSGLSRMLGVKKEK-FIVAPPERKENDVIAEIVEL-------------SCFTFFYAATPDCHKNFELLCDAASLLEQELGKFKVVLTISGQ-ENKYAQWLYKKFGSVSSIEFAGFMEKLFGYYHAVDCLVFPSKVETWGLPVSEFMATGKPMLLADLPYAHETAAGSMQTAFFKLSDPVQLMNLMKRLCEDDTFLTSIGTSDKRFS-FASSWRELFDSILN............. 370
27 -49.000gi|29348346|ref|NP_811849.1| putative glycosyltransferase BT_2937 [Bacteroides thetaiotaomicron VPI-5482]  ali   12  1MKVTVIDCSVGHRETYYKQFAQTWAGMGYETSLIAPDGKGIQEAVASALPLLPLPAGKPLRNAVIRLRNLYRLRRSLQRLNPDLVFFACLDDMLPTLAPLWLFNLLLPYQWSG-----LLVQSALPPYHRGMPDTRPFLRSKNCVGVGILNEYSAKGLETF-----QRHILLFPDFADLSAPATNYPLLRKLKERA-----RGRKVISLLGSINFRKGIKLLLESIPLLPK--DEYFFLIAGKSSLTAQ-QENDLRAFGESRNNCLFSLEESCFNALIAESDLIFAAYKTGSSNLLTKAAAFRKPVIVSRGLCMGRRVEQYGTGQTTGEDNAGECSAAIRSLCTETRMDTQ----AFARYAHEHEVEKLITCFNQISKHI........ 376
28 -47.700gi|29346588|ref|NP_810091.1| hypothetical protein BT_1178 [Bacteroides thetaiotaomicron VPI-5482]  ali   11  1MKGLFLIFHGNGISKKIRYQVKALKECGLEMHTCWLDDTDNHKRRMVDESII-ADYGFGIKGKILKRIEFDSIVHYVQKENIDFIYVRYVHNSIRLMKLLKKTGARIVMEIPT-YDQEYKGLPFVYQRILFIDKCFRQHLARYVDKIVTFSDYDIIW---------NRPTIRISNGIDFSEIPLRGPKNDT----------AHSLQLIAVATMHPWHGFDRVIAGMANYYRTHTKVYLNIVGFGVPEVDSYKKDVAKHQLEKYIIFHSALKELDAVFEQSDMGIGSGIDKIKTLKNREYAARGIPFVYSETDDDFE---HQPYILKAAPDDS---PLDIEKVIRFYQSLKTTPLQIRMSIEQSLSWKAQMQIVINETFE......... 376
29 -44.500gi|29346585|ref|NP_810088.1| hypothetical protein BT_1175 [Bacteroides thetaiotaomicron VPI-5482]  ali   13  11IKALIVFENGDTDNLFVPILCDAIRTTGIDVRCSTNE--------------------------------------WNSDTPYDIIHFQWPEEVMEGNCFFRSRGARFVYTRH----------NVRPHDANEVIGRAYDIIEEQSDVVVHMGRYSLDEFAAKH---ADSRNVIIPHPIYQYTYKE----DISVERARQYLNLPEAFIVTSFGKFRNREERRMVTGAFRKWDEAKKFLNFFKRWTSRAGYYLLIPLLNRLRRMHAGASDEPICDLPYYMAASDVIFIQRKDILNSASIPLAFLFHKVVIGPNIGNIGEILQDT-GNPVFHPDNQFDIIRALEAARQLSA--RRKGEDNYAYAIENMNSGKIGKEYAELYRNLANLS.... 371
30 -44.200gi|29345464|ref|NP_808967.1| putative glycosyltransferase BT_0054 [Bacteroides thetaiotaomicron VPI-5482]  ali   10  6KLIVVVGLRQGGTLTILKECLQYLSTCVREGHVRVIAIVHDRRLAENGIEYIELPDVIKSWTRRLWCEYITMHRISQRLPGIDLWLS-------LHDTTPRVIAKRQAVYCQTSFPFYKRTFNYKIALFSLFTRYAYRINVHRNQYMIVQQSWLREGLSRMLGVGKEK-FIVAPPRRMAVKVETESVNL-------------PCFTFLYASAPDCHKNFEVLCQAARLLEKEKGCFKVVVTLSGK-ENRYTRWLYKNWHDVNSIEFAGYMEKLYGYYQAAHCLVHASKVETWGLPISEFGETGKPMLLADLPYAHATASGFHAVGYFNEHKPEELKRLMKEMLEGDHRSLSSQPSTAIKGLYVCSWRELFEKLLPAS........... 372
31 -42.500gi|29345888|ref|NP_809391.1| hypothetical protein BT_0478 [Bacteroides thetaiotaomicron VPI-5482]  ali   11  3EKILFLTAYVAAGEKNTMIMLNDLAS-CYDVDLIYFKYDWENDYVPERGNICNFPFVHPTFSIRFNWLILRRVRDLLKMNHYKVVIFNHSNMFLYGRYIDK--RIPKILLCH-DVIAQRVLRSSSYLMQKICIFSERMSLNLPNAHIFSFSQKDCDLIKQIY----HKETNLCLDYIDEQIINKSPDKVEDY--------------FTMFGDWRRKENAEGALWFINTVGPLRKKVHIKIIGRGF-----PNKDVKNIVPNLNLDILGFVDDPYKILSQSKALISPLFTAGIKVKVIEALACGIPVIGTDIAFEGLPPLFN--SFMLIAETPKDYIRCMECLNLNIDERIKT----KEMFIKTYQSDSITNYIKRI............ 368
32 -39.500gi|29346704|ref|NP_810207.1| glycogen [starch] synthase, glycosyltransferase BT_1294 [Bacteroides thetaiotaomicron VPI-5482]  ali   10  9DYIFESSNKVGGIYTVLSTRANTLQEKRDRIFFIGPDVWQGKE-DHLSVRVGRWNIPGEPIVILVDFQPFFEQKNEIYTEDKVVYQAHEWMTGMGALYVQEAPEVATIFTTHADYLFAYNGDQMAQELNMQSKHSIEKQTAHYVDCFTTVSEITNNECKELL---DKPADVVLMNGFEDDFVPKGSTFTGKRKRARSLML-DDTLIIGTSGRYEKNKGIDVFLESLNRLNRDKKLLAFINVPGWVGDPRRPDDKVKVIFVPCYLDGRDGILNYYDILLGQDLSVYASYYEPWGYTPLESVAFRVPTITTDLAGFGLWVNSLKDGVEVLHRSADGIKDTITLFADKSEKEVKEIRKHAADVAEQALWKHFIQYYYEAYDIALRNAMKR. 550
33 -38.800gi|29345794|ref|NP_809297.1| hypothetical protein BT_0384 [Bacteroides thetaiotaomicron VPI-5482]  ali   1MKKVYYIGWYVPGNLKMHYVVDQLKRSGHTPEIISFVKKKGSTGVYMNINKTSQECKLTYLTGIRGNSRILKKMDFLFSAEDTLVLYHSVELTLLVAKLKRLVKRNVIIEVEEIYGYSAV--------TDRPWVEDEIDSIKKMDLHICVNDGIPQGL------KLETGKFVVSLGVGNIPTRTIDRFN------------DGKIHVVYAGTIEMKKLGAMTAVESAKFLPD--YYILHILGFGSEENKLKISEVNNDVGSERIKYDGYKKELDDFLFSCHIGLSSFANNSFPSKVITYMCHDLSVVLGYAEAFYD-VPMSRGWQFYHEYTPEKIAEAITKVEIKPIGYYHPSIIRMNSNLQAFFKK..................... 375
34 -35.100gi|29345652|ref|NP_809155.1| putative polysaccharide deacetylase BT_0242 [Bacteroides thetaiotaomicron VPI-5482]  ali   10  2..........................................................................................................................................................................................................NSHHTVAIGTWEGDKQ------------QSIEYNSSIAVGIDCPRAKLRVSILLDTIQEYQVRYIFSDEEISEAVNEAGLII------GARGIAYEGVLQRKPVIVVGEYGFGGLVTPDTNGIKAEYFSLERLEEEIRRGFAL----------------TFQELQMMSNQTIRFLHNI........ 158
35 -17.700gi|29348857|ref|NP_812360.1| N-acetylglucosaminyl transferase BT_3448 [Bacteroides thetaiotaomicron VPI-5482]  ali   10  5LRIIISGGGTGGHIFPAVSIANAIIELRPDAKILAEGRMEMQRVPDAGYKIIGLPIAKNVSVLIKLARSQWKARSIIKNFRPQVAVGVGGYASGPTLKTAGMMGVPTLIQEQNSY-------------------VTNKLLAQKAKAICVAYDGMEKFF-------PADKIIMTGNPVRQNLTKDMPEKGAALRSFNLQ---PDKKTILIVGGSLGARTINNTLAALATIKEN--NDIQFIWQTGKYYYPQVTEAVRAAGELPNLYVTDFIKDMAAAYAASDLVISRA-----AGSISEFCLLHKPVVLVPSPNVAEALVDKQAAIYVKDSEEAKLMDVALNTVADDRKLKELSENIAKLALPD-----SARIIAQEVIKLAEAEN... 372
36 -17.600gi|29345645|ref|NP_809148.1| hypothetical protein BT_0235 [Bacteroides thetaiotaomicron VPI-5482]  ali   11  1MKFLFIVQGEGGHLTQAITLEEMLLRNGHEVVEVLVGESSSRILPGFFNRNIQAPFTYNLLRIPEYFRSMCYINQRIKETGAEVVINFYELLTGLTYALFRPSVPYVCVGHQYLFLHQNFEFPDKNSFELRMLRFFTKMTAVRSSKKLALSFNDMEPDRGQ---------------------QVVVVPPLIRQEVTAIQPEEGNYIHGYMVNSGFADSVEEFHTIY-------PEVPLRFFWDKADAEEVTR-------IDETLSFYQIDDVFLNGMAGCRAYATTA---GFE-SICEAMYLGKPVLMIEQDCNAHDAMRAGAGIISDSFDLKPLLRFAGTYSPNRTFVRWV-RSGERRIILELEKLAASQSAITSIPTFTN...... 371
37 -16.900gi|29346703|ref|NP_810206.1| alpha-glucan phosphorylase BT_1293 [Bacteroides thetaiotaomicron VPI-5482]  ali   113FSMEYGLSSSGGLGVLAGDYLKEASDSNVDLCAVGRYGYFTQTLSMDGISLYLLDTDDWENRLKQEILLGIGGILTLKALKKDVYHCNEGHAALINV-SIELVRASSLYTVHTPVPADLMDLGRNNPGDKGERFCMSVFACNTSQEVNGVSWLHGKVSQEMGYFPEEIHVGYVTNGVHFPTWSATEWKEKNQGDPSRIVSLPNALLIGFGRRFATYKRAHLLFTDLERLSKPDYPVQFLFTGKAHPHDKRIIEISRRPEFLGKIIFLNYDMQLARLVSGVDIWLNTPTREASGTSGEKALMNGVVNFSVLDGWWLEGYREYQNQEHQDQLDAATIYSILETEIGYSEGWIKVVKNSIAQIAPHYTMKRQLDDYYNKFYNKLAKRFHML 719
38 -15.400gi|29349412|ref|NP_812915.1| lipid-A-disaccharide synthase BT_4004 [Bacteroides thetaiotaomicron VPI-5482]  ali   1MKYYLIVGEASG-DLHASHLMTALKAEDPQADFRFFGGD---LMAAVGGTLAYMGFIPVLLHLRTIFANMKRCKEDIVAWNPDVVILVDYPGFNLNKFVHSETQIPVFYYISPKI----------------WKEYRIKNIKRDVDELFSILPFEVEFYTLKHRYP----IHYVGNPT-VDEVTAYQKAHPKNPEAFLADNNLEDKPIIALLAGSRKQEIKDNLPDMLKAASAFPDYQLVLAGAPGIAPEYYKQYVGQAKVKIIF------AQTYRLLQHAEVALATS-----GTATLETALFRVPQVVVKFISLVNLIADRE--LVADTMTVGNMQNELKKLIEDQEYKNRMLAEYEY-MADRLGPAGAPQHAARKMLELLKK..... 378
39 -14.500gi|29346510|ref|NP_810013.1| alpha-glucan phosphorylase BT_1100 [Bacteroides thetaiotaomicron VPI-5482]  ali   310.SSLYTVHTPAGHDYFDEGLFNKYMKGYPGKLGITWDNLMDLGRHNPGDKEERFCMSVFACKTCQEVNGVSKL------------HKSVSQQMFAPIWKGYFPEENHVGYVTNGVHLPTWCAAEWKKLFKDNFDENFFCDQSNQKIWEAVYGIPDEEIWNTRLKQKAKLLDYIK-----SKCSKDWLRTQIDPALSVSIFEPDALLIGFGRRFATYKRAHLLFTDIDRLARIKYPVQFIFAGKAHPNDKQIVEISRRPEFLGKIIFLNYDMDLARLISGVDIWMNTPTREASGTSGEKALMNGVLNFSVLDGWWYEGYRK-QNEQYQNQLDAEAIYYLLEHDIGGKNYSEDWVKYIKNSIAQIAPHFTMKRQLDDYYDRFYNKLSEHF 717
40 -14.500gi|29348156|ref|NP_811659.1| 3-deoxy-D-manno-octulosonic-acid transferase BT_2747 [Bacteroides thetaiotaomicron VPI-5482]  ali   47.QYIWFHAASLGEFEQGRPLIEMIREKYPDYKILSPSGYEVRKHYRGADIVCYLPFD-----------KPRNVKKFLDIANPCMAFFIKYEFWKNYLDELHKRRIPVYSV---------SSIFRRDQIFFKWYGGTYRNVLKDFDHLFVQNEASKRYLSKIGI----CRVTVVGDT----DRVLQIREEAKDLPLVKMFKGDNAFTFVAGSSWGPDE------DLFLEYFNTHPEMKLIIAPHVIDENHLVEIISKLKRPKVDCLIIDCFGLLSSIYRYGEVAYIGGGFGVGIHNTLEAAVYGIPVIGPKYQKFMEAIRLLEAKGAYSIKDYHELKTLLDRFQADDVFMRETGANAGYYVTSNAGATEKIMHMINF............ 407
41 -12.700gi|29346011|ref|NP_809514.1| UDP-N-acetylglucosamine 2-epimerase BT_0601 [Bacteroides thetaiotaomicron VPI-5482]  ali   12  3KKVMLVFGTRPEAIK-MCPLVKEFQKREFETIVCVTGEMLDQVLKIFDVKPYDLNIMKQGQDLTDVTRVLTGLRDVFKECRPDVVLVHDTTTSMAGALAAFYSQIP-VGHVEAGLRTHNIYSPWPEEMNRQITGRI-------ATYNFSPTPLSERNLLEEKA--HGNIYVTGNTVIDALYMVVNKLKTDDALAKEQDN-NGKKLVLITGHRRENGDGFIRMVTTMKDLSEKYLEVDFVYMHLNPNVRKPIHEVFGEDLTRPNFFFIEPLQEFVHLMSRATIVLTDS-----GGIQEEAPGLGKPVLVMR----PEALASGTV--HLVGTDYDKIMNEVSVLLDDAAAYDAM-----SKAVNPYGDGQACCRIADILADKETERYDV. 391
42 -12.100gi|29347126|ref|NP_810629.1| putative teichoic acid biosynthesis protein B precursor BT_1716 [Bacteroides thetaiotaomicron VPI-5482]  ali   168........................................................................................................................................RNTTCNSFDYSIATSCLSARIISIDCGISYDKFKVL---GFPNDLLISKNNCNVIKREISKFAGYDVTKYIVYTPTFRDYETLGYVDCDLLKLSKILLKFNAALI---LHPLQNKTVLKKDLPKGILVFEQTYKYGLYDLLSFSDGMI-----TDYTSTYFDFLLVNKPVIRRVRGFSFEPIEFFCAGDIV--YNYNELIDAVMGLLAGKDIHAEHRRHISLLMNQFQDDNSTKRICDIFLNEI........ 419
43 -12.000gi|29345793|ref|NP_809296.1| putative UDP-N-acetylglucosamine 2-epimerase BT_0383 [Bacteroides thetaiotaomicron VPI-5482]  ali   11  20LKLIIVVGTRPEIIR-LAAVITKC-RQYFDVILAHTGQNYDYNLNGIFFKDLKLAKPEVYMDAVGD-NIINCSYKLFAQTKPDGVLVLGDTNSCLSIIGAKRLHIPI---FHMEAGNRCKDECLPEETNRRIVDII-------SDVNMAYSEHARRYLADCG-LPKERTYVTGSPMAEV-----ENLAEIEASDVHNRLGLEKGKYILLSAHREENIDTEKNFLSLFNAINAMAEKYDMPILYSCHPRSRNRLAASGYKLDHRVILHEPLGDYNCLQMNAFAVVSDS-----GTLPEESSFFTSIGRIRTSTERPEALDKACF--VLSGIDTKGLVQSVELAVELAK------DGSHGIPVPSYVDENVSTKVVKIIQSYVGVVNKMV 392
44 -11.700gi|29348353|ref|NP_811856.1| putative UDP-N-acetylglucosamine 2-epimerase BT_2944 [Bacteroides thetaiotaomicron VPI-5482]  ali   14  1MKKILLVFGTRPEAIKMAPLVKALQKEHFETRVCVTAQMLDQVLEVFGITPYDLNIMAPNQDLYDITKVLLGLREVLKDFRPDTVLVHDTTTSMAASLAAFYMQIP-VGHVEAGLRTYNMLSPWPEEMNRQVTDRI-------CTYYFAPTEQSKVNLLQEN-IDAKKIFITGNTVIDALLMAVDIISTTKELQEKGYTVGDREYILVTGHRRENGDGFLHICKAIKELAALHPEMDIVYP---HLNPNVQKPVYELLSGLSNVYLISPLDPFIYAMQHSTLLLTDS-----GGVQEEAPSLGKPVLVMRDTTERPEAVEAGTVKLVGT-NAEAIVSNVTALLLDKEMYKRM-----SETHNPYGDGQACERIIAALRC......... 376
45 -10.200gi|29348288|ref|NP_811791.1| hypothetical protein BT_2879 [Bacteroides thetaiotaomicron VPI-5482]  ali   36.NIRVLFAVAESATWKSDCLYKAMAEHPFTPSILVLPDEQKEKTLLKEEVDSCFNLFCRKGYACTYPYQNGKLINIRKKLKPDIIFYQKPYTFYPSLLYYKNMNALFCYTNYAFHSLLTDWAN-------------DNEFFRLMWQNYYENESANVDLKKKFAGIFSNIVVTGLPVTDL----------TEKHEDKWKKTDKSRKRIIWAPHFSISDGAEELLEFIKNAFKPHPLLKSQLYNYSSWGKEKTDEYYAAWEFLPNAQL--ETNEYVDLFMTSDAMI-----HDCGSFTIEYHHTLKPVMYLVNGKEHTATMNSFADLHYKGQTIQDIRNFIECTVLENS--DYLLEKRKNFFKSYLLPPHNQSATENIIHAILGT..... 411

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.