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Query: TM1651 TM1651 283508 Purified-2001-12-11, from JCSG0408

Results of FFAS03 search in COG0408
Master-slave alignment does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGGLQNVRSAALIGHNGSGKSLLLAQILYKSGLIDKADTKYVDYDPVEEEKGASFSSHVASLEWKGKKVYLIDTPGFSDFISEVINGIFVSENIISVVNAVAGVEIQTERTWNMADEMKKPIIVFVNQMDKERANFENVVAELKERFSRKIVPVVVPIGAAENFEGVVDLLKKKAYRYDGDKVQEEDMPESFNDMRSEILEDIVEQDEELMMRYLDGEDIGYDELMRVLKEGYKKGEIVPVLSGSALKGIGLDLLLDYLGDIGVSPEEAPSYKALLEDGTEIEVKFSEEEPFCAYIFKSVVDQFVGRITFAKVIAGVLRPGDTVVNVQKDVTEKVGHVYVPILKQQKEVESAGPGEIVVLLKLKEGAVGETLAHRDRRVKIVPPAFPEPMFSRSVHPKSKSDIDKISSGLSRLSDSDPTFVWEYDPETGETVVSGLGAMHLDVMIERLKKIFGVDVEVGKPKIAYRETITTTAVAEHKHKKQTGGHGQYGHVKIQLEPLPRGQGYEFVDKIVGGVIPRNFIPSVDKGIREAMKKGVLAGYPVTDVRVILFDGSYHEVDSSDISFQIAAIQAFKKGMEAAKPVILEPIMEVEVFVPEENAGDVMGEISSRRGRPLGMEPSGKGMVKVKAEVPLAEMLDFSSKLSSITSGRGYFTMRFQRYEIVPPNIQEKIIEERRREMQEQEKLast
1 -174.000[J] COG0480 Translation elongation factors (GTPases)  ali follow..  38  4INPLEKVRNIGIAAHIDAGKTTTTERILFYSGIIHKIGEAVTDWMDQERERGITITAAAISTSWKDYQINIIDTPGHVDFTIEVERSMRVLDGVIAVFCSVGGVQPQSETVWRQADRYKVPRIAFINKMDRTGANFYRVHEQMRDRLRANAIAIQLPIGSENDFKGIVDLVRKRAYMYNNDQDIPADLQDQVEEYYTKLVEAVAETDDDLMSKYFDGEPLTEEEIRSALRKGTIAGTIVPVLCGSAFKNKGVQLMLDAVVDYLPAPTEVPPIQGTLPNGDAIERRADDNEPLAALAFKIMADPY-GRLTFVRVYSGVLKKGSYVLNATKNKKERISRLVLMKADDRQDVEELRAGDLGAALGLKDTLTGDTITDEGAPVILESLFIPEPVISVAVEPKTKNDMDKLSKALQSLSEEDPTFRVNVDPETNQTVIAGMGELHLEILVDRMLREFKVEANVGAPQVAYRETIRKPVTVEGKFIRQSGGKGQYGHVVINLEPGEPGTGFEFVSKIVGGVVPKEYIGPAEQGMKESCESGILAGYPLIDVKATLVHGSYHDVDSSEMAFKIAGSMALKEAVLKASPVLLEPMMKVEVEVPEDYIGNVIGDLISRRGQIESQSTEQ-GLAKVASKVPLATMFGYATDIRSKTQGRGIFTMEFSHYEEVPRSVAETIIAKSKGN...... 691
2 -157.000[J] KOG0465 Mitochondrial elongation factor  ali follow..  30  64IGRCNKLRNIGISAHIDSGKTTFTERVLYYTKRIKAIHEAKMDSMDLEREKGITIQSAATYCSWKNYHFNLIDTPGHIDFTIEVERALRVLDGAVLVVCAVSGVQSQTVTVDRQMRRYNVPRVTFINKMDRMGSDPFRAIEQLNSKLKIPAAAVQIPIGSESSLSGVVDLINRVAIYNKGDNPVPENLKPLMEEKRQLLIETLADVDDEMAEMFLEEKEPTTQQIKDAIRRSTIARSFTPVLMGSALANTGIQPVLDAIVDYLPNPSEVLNTALDSNNEAKVNLVPAVQQPFVGLAFKLEEGKY-GQLTYVRVYQGRLRKGNYITNVKTGKKVKVARLVRMHSSEMEDVDEVGSGEICATFGID-CASGDTFTDGSVQYSMSSMYVPDAVVSLSITPNSK-DASNFSKALNRFQKEDPTFRVKFDPESKETIISGMGELHLEIYVERMRREYNVDCVTGKPQVSYRESITIPADFDYTHKKQSGGAGQYGRVIGTLSPVDDITKNIFETAIVGGRIPDKYLAACGKGFEEVCEKGPLIGHRVLDVKMLINDGAIHAVDSNELSFKTATMSAFRDAFLRAQPVIMEPIMNVSVTSPNEFQGNVIGLLNKLQAVIQDTENGH-DEFTLKAECALSTMFGFATSLRASTQGKGEFSLEFSHYAPTAPHVQKELISEFQKKQAKK.. 761
3 -148.000[J] KOG0469 Elongation factor 2  ali follow..  24  13MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAAGETRFTDTRKDEQERCITIKSTAISLFFNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLFMNKMDRALLELQLGAEELFQTFQRIVENINVIIATGSGLHGWAFTLKQFAEMYAGKKWSSTQTDESKRGFCQFVLDPIFMVFDAVMNIKKDKTAALVEKLGIKLANDEKDLEGKPLMKVFMRKWLPAGTMLQMIAFHLPSPVTAQKYRMHDDEAAVAIKTCDPNGPLMMYISKMVPTSDKGRYAFGRVFSGKVATGMKARIQGPNYEKTIQRTILMMGRFIEPIEDIPSGNIAGLVGVDQLVKGGTITTYKDAHNMRVMKFSSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCI-FEESGEHIIAGAGELHLEICLKDLEEDHCIPLKKSDPVVSYRETVQSESN----QICLSKSPNKHNRLHCTAQPMPDGGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQITARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKDTRKRKGLKEG 841
4 -140.000[J] KOG0468 U5 snRNP-specific protein  ali follow..  21  125MDTPPLIRNVALVGHLHHGKTTFVDCLIRQTHPQFETMERYTDTLFTEQERGCSIKATPVTLVLQDYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLNTERLLKHAVQERQAITVCINKIDRLILELKLPPQDAYFKLKHIVSPILGNVCFASSLYGFCFTLKSFAKLYADTKTRKFSKKQPHNSAQRSFVEFILEPMYKLIAQVVGDVSDTLAELNVRVSKEEMKSNIRPLLRLVCNRFMGDSGFVDMCVEHIKSPLENAKRKVKEGDIYRDMISCNQYGTLMVHSSKMYNDDCTFFQVLARIVSGTLHAGQEVRDEEDSRILQVGRLWVFESRYKVELNRVPAGNWVLIEGIDQCIVKVDINVPEDLYIFRPLKFTQSIIKIAVEPVNPSELPKMLDGLRKVNKSYPLLSTRVE-ESGEHVILGTGELYLDCVMHDLRKMYEIDIKVADPVVAFCETVVETSSLKEPLEKGLAEDIENGTVCINWNKKRIGGPNILVDDTLPSEVDKNLLTSIVQGFQWGTREGPLCEEPIRNVKFKILDGVIANEALHRGGGQITARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQDAPVGSPIYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDKSIIIRPLEPQQASH 931
5 -105.000[J] COG4108 Peptide chain release factor RF-3  ali follow..  19  9FGEVSKRRTFAIISHPDAGKTTITEKVLLFGRAIQVAGTAKSDWMEMEKERGISVTTSVMQFPYGDCLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDAAKGVEDRTRKLMEVTRLRDTPIVTFMNKLDREIRDPMELMDEVENELKIACSPITWPIGCGKEFKGVYHIHRDETILYTSGQGHTIQEERIIKGLDNPELDQ--AVGADLAAQLREELELVLGASHEFDRELFLQGELTPVFFGTALGNFGVDHMLDGLTQWAPSPMPRQAAE------RVVEASEEKFTGFVFKIQANMDPKHRDRIAFVRIVSGTYKQGMKMNHVRLGKQVNISDAVTFMAGDRARAEEAFAGDIIGLHNHGTIQIGDTFTQGE-TLKFTGIPNFAPELFRRIRLRDPLKQKQLLKGLVQL-SEEGAVQVFRPLQNNDLIVGAVGVLQFDVVVSRLKSEYNVEAIYEGVNVATARWVEVKKFEEFKRKNQSNLALDGGDNLAYIAPTMVNLNLAQER.............................................................................................................................................................................. 519
6 -77.900[T] COG1217 Predicted membrane GTPase involved in stress response  ali follow..  23  2...IENLRNIAIIAHVDHGKTTLVDKLLKLSGTLDRESERVMDSNDQEKERGITILAKNTAIKWNGYNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVVNKIDRPGARPDWVIDQIFDNLGATDEQLDFPIVYASALNGIAGLDHEKM-------------------------------------------------------------------------DDNMDALFQAIIDHVPAPVV------------------DTEGPFQMQISQLDYNSFLGVIGIGRITRGKVKSNTPVVAISDDGSKRILKIMGHHGLQRVEVAEAEAGDIVCVSGMEELFISDTLCDPQNVEALPPLTVDQPTVSMTFQVNDSPFAGRIKERLEKELLHNVALRVEPGDSPEKFKVSGRGELHLSVLIETMRRE-GFELAVGRPEVVIIEKD---------------------------------------------------------------------------------------------------------------GEKQEPYENVTIDIEEQHQGSVMEQMGLRKGDLSNMIPDGKGRVRLEYTIPARGLIGFRNNFLTLTSGTGILTSTFSHYGPIKAGEVSNRQN........... 485
7 -75.800[J] KOG0462 Elongation factor-type GTP-binding protein  ali follow..  25  36EFTPDKIRNFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQGVQAQTIANFWLAFEKNIQIIPVINKIDLPGADIKSVETQLKNLFEFNP---------------------------------------------------------------------------------------EECLHISAKSGLNVDKVLEAIIDRVPAP------------------TAIIDAPFRSMIFDSYFDHFRGAIAHIMVKEGSVKKGDKIQSYQNEKVYDVSGVMRPEMVKCTELRAGQVGYLVCMRTVNEAVVGETLFAETTSKTFAEIKGVKPTVYAGLFPVETSDYESLKQAVERLCLNDPSVTVIPDSSKAL--IGFLGVLHMEVFGARLSQEYDASVILCQPSVEYRAKIK--------------------------------------------------------------------------------DNETIRKKRYDGMEEIRILDPSKFPDESDVDSFLEPMVKVRMIVPNEMMGTVNGLCSECRGERGEITSIDSTRLVILWRLPLAEAVDFFERLKKLTSGYASFDYEPDGWQDTRLVKLTILINS.......... 534
8 -75.000[M] COG0481 Membrane GTPase LepA  ali follow..  23  1...MKNIRNFSIIAHIDHGKSTLSDRLIQTCGGLREMEAQVLDSMDLERERGITIKAQSVTLNYKTYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAIEMNLEVVPILNKIDLPAADPERVAEEIEDIVGIDAMEAVRC---------------------------------------------------------------------------------------SAKTGVGIEDVLEEIVHKIPAP------------------EGDPNAPLQALIIDSWFDNYLGVVSLVRIKNGTLRKGDKIKVMSTGQSYNVDRLGIFTPKTTILNCGEVGWVVCAIKDILGAPVGDTLTSHNNPASLPGFKKVKPQVYAGLFPISSDDYEAFRDALGKLSLNDASLFYEPENSTAL--CGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVEKT--------------------------------------------------------------------------------DGEVIYVDSPSKLPPLN-----------NITEIREPIAECNMLLPQTYLGNVITLCVEKRGVQTNMVYHGNQ-VALTYEIPMGEVLDFFDRLKSTSRGYASLDYGFKRFQAADMVRVDIMIN........... 488
9 -30.800[J] KOG1145 Mitochondrial translation initiation factor 2 (IF-2; GTPase)  ali follow..  16  178....PRSPVVTIMGHVDHGKTTLLDKFR--------------TQVAAVETGGITQHIGAFLVSLPGEKITFLDTPGHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVESIQHAKDAQVPIILAVNKCDKAEADPEKVKKELLAY-----------DVVCEDYGGDVQAVPV-----------------------------------------------------------------------SALTGDNLMALAEATVALA----------------EMLELKADPNGPVEGTVIESFTDKGRGLVTTAIIQRGTLRKGSVLVAGKCW-----AKVRLMFDENGKTIDEAYPSMPVGITGWRDLSAGEEI------LEVESEPRAREVVDWRKYEQEQEKGQEDLKIIEEKRKEHKEAKAREKYGHLLWKKRSILRFLERKEQIPLKPKEKRERDSNVLSVIIKGDVDGSVEAILNIIDTYDASHECELELVHFGVGDISANDVNLAETFDGVIYGFNVNAGNVIQQSAAKKG---------VKIKLHKIIYRLVEDLQEELSSRLPCAVEEHPVGEAS-----ILATFSVTEGKKKVPVAG-CRVQKGQL----EKQKKFKLTRNGHSLTSLKHHKDDISIVKTGMDEDNMEFQVGDRIVCYEEKQIQAKTSWDPG.... 726
10 -28.700[J] KOG0460 Mitochondrial translation elongation factor Tu  ali follow..  18  47FVRKKPHVNIGTIGHVDHGKTTLTAAITKCLSDLGQ--YSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMPQTREHLLLARQVGVKQVVYINKVDMVEPDMIELVE---------------------------------------------------------------------------------MEMRELLSEYGFDGDNTPIVSGSALCALSITKLMEAVDSYITLPER------------------KTDVPFLMAIEDVFSISGRGTVVTGRVERGTLKKGAEIEIVGYGSKTTVTGIEMFKK----QLDAAVAGDNCGLIKREQLKRGMIVAQPGTVAPHQKFKARRTGFVDKYRPQLYSRTSDVTVELTHPDPNDSDKMVMPG-DNVEMICTLIHPIVIEKGQRFTVREGGSTVGTA................................................................................................................................................................................................................................ 432
11 -26.000[J] COG0050 GTPases - translation elongation factors  ali follow..  20  6FERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYG----QIDNAPEEKARGITINTSHVEYDTPARHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIVFMNKCDMV-------------------------------------------------------------------------DDEELLELV-------EMEVRELLSAYDFPGDDLPVVRGSALKAAKIIELAGYLDSYIPEPER------------------AIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVVGIKDTVKSTCTGVEMFR----KLLDEGRAGENVGVIKREDIERGQVLAKPGSIKPHTTFESEVYILSKDEGGRHTPFFKGYRPQFY-FRTTDVTGTIELPEGVEMVMPGDNINMIVTLIHPIAMDDGL...................................................................................................................................................................................................................................... 373
12 -25.800[P] COG2895 GTPases - Sulfate adenylate transferase subunit 1  ali follow..  17  21AQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIKRHGTQLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVINKMDLV-------------------------------------------------------------DYSEETFTRIREDYLTFAGQLPGNLDIR----------------FVPL---SALEGDNVAPTLLEVLETVEIQRV------------------VDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDG----DREEAFAGEAITLVDEIDISRGDLLLAADEALPAVQ-SASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLS....................................................................................................................................................................................................................... 425
13 -25.200[J] COG3276 Selenocysteine-specific translation elongation factor  ali follow..  16  2........IIVTSGHVDHGKTALLKALTGTS----------TAHLPEEKKRGMTIDLGYAYLPLENKVLGFIDVPGHEKFLSNMLAGLGGVHYAMLIVAADEGVAVQTKEHLAILRQLQFHEIVVITKADRTNSA-------------------------------------------------------------------------------------QIESLIQTIKQDYSFLRNANYFVTSAETGQGISELRHYLANLAEL--------------------ADTQKPFRYAIDRVFSVKGAGTVVTGTAFSGTVKVNDEIY-LSTGQKIRIKAI-----AQNTSSEQGIAGQRLALLDRTPMKRGDWLLQNEPLPPTDRIYHGASRTTGKLTLLQGKNAAKNDRTLAEIILDSPLF-ILRSGDTKTLIAGAR....................................................................................................................................................................................................................................................... 339
14 -24.900[J] KOG0458 Elongation factor 1 alpha  ali follow..  14  161VKSALPHLSFVVLGHVDAGKSTLMGRLLYDLNIVETMGKSIMDQTNEERERGVTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDCSTNADGQTKEHMLLASSLGIHNLIIMNKMDNVDWS-QQRFEEIKSKLLPYLVDIGFF------------------------------------EDNINWVPISGFSGEGVYKIEYTDEVRQ-------------------------YNGPNLMSTLENAAFKISKENE----------------GINKDDPFVLEIIPSKKTSNDLALVSGKLESGSIQPGESLTIYPSEQSCIVDKIQVGSQQGQSETDVAIKGDFVTLAYPEDIQNGDLAASVDYSSIHSAQCFVLELLLPGTPFILFIGVKEQPARIKRLISFIDKGNTASKKKIRHLGSKQRAFVEIELI............................................................................................................................................................................................................................................... 572
15 -24.100[J] COG5257 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase)  ali follow..  15  1MKNQSEI-NIGLVGHVDHGKTTLTKALSGVWTDTHSEETKITFRKCPQCEAPMCYTTAEICERCGLRKVSFVDAPGHETLMATMLSGAALMDGAILVIAANEPCQPQTKEHLMALDVIGVKDIVVQNKIDIVSKERALESY---------------------------------------------------------------------------------REIKEFVKGTCAED--APIIPVSAQQGANIDILIETIEERIKTP------------------KRDVDKPARMYVARSFDEHLAGGVIGGSLVQGRLRVGDEIEIRPGIQVKKDGKQITGLVAGGEEMEEVGPGGLVGVLTKADSLSGSVAGEPGTPPVRHSFTMETHLLERVVGTKEETKVEPIK------TGEPLMINVGTTTTVGVVKSARADDADVVL................................................................................................................................................................................................................................................ 377
16 -24.100[J] KOG0052 Translation elongation factor EF-1 alpha/Tu  ali follow..  18  1MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIQEMGKGVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGKNGQTREHALLAQTLGVKQLIVCNKMDSTEPPFS------------------------------------------------EARFTEITNEVSGFIKKIGYNPKAV--PFVPISGFNGDNMLE-------VSSNMPWFKGWAVERKSGKTLLEALDSIIPPQRPT-------------------DRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHH----ESLPEAVPGDNVGFVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSDAGIVELIPTKPLCVE.................................................................................................................................................................................................................................. 413
17 -23.800[J] KOG0466 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase)  ali follow..  12  43........NIGTIGHVAHGKSTVVKAISLERNITIKLGYAQLDDPSCPRPECYRSCGSSMPDEFPVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCQPQTSEHLAAIEIMKLKHLILQNKIDLVKER-------------------------------------------------------QAKEQYEQILAFVQGTVAE-----------------------------APIIPISAQLKYNIEVVCEYIVKKIPVPPR------------------DFTSEPRLIVIRSFDDDLKGGVAGGSILKGVLKVGQETEVRPGIVSKDSEGKLMCKSAEHNDLQYAAPGGLIGVLCRADRMVGQILGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIGSLSTGGRVSAVKADLGKIVL................................................................................................................................................................................................................................................ 429
18 -23.700[J] KOG0459 Polypeptide release factor 3  ali follow..  17  95EANKKRHLNVVFIGHVDAGKSTIGGQILFLSGQVKDKSREIMDTNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEGGQTREHVQLAKTLGVSKLIVVNKMDDPTVNWKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRMGQEICP------------------------------------------------------------------SGPSFFEVLDSIEIPPR------------------DPNGPFRMPIIDKFKD--MGTVVMGKVESGSIREGDSLVVMPNKEQVKVVAIYCDE----DKVKRAGPGENLRVIEDEDILSGFVLSSIVNPVPAVTEFVAQLQIKAILHIHAVVEECEIIELKSQI---DLKTRKPMKKKVLFVKNGAAVVCRIQVTNSICIEKFSDFPQLGRFTLR-GKTIAVGKVTELLSSVSSA....................................................................................................................................................................................................... 532
19 -23.000[J] COG5256 Translation elongation factor EF-1alpha (GTPase)  ali follow..  19  4MASQKPHLNLITIGHVDHGKSTLVGRLLYEHGEIEQKGKAVMDRFKEERERGVTIDLAHRKFETDKYYFTLIDAPGHRDFVKNMITGTSQADAAILVISAREGVMEQTREHAFLARTLGVPQMVVINKMDATSPPYSEK-------------------------------------RYNEVKADAEKLLRSIGFKDISFVPISGYKGDNVTKP------------------------------SPNMPWYKGPTLLQAL-DAFKVPEK------------------PINKPLRIPVEDVYSITGIGTVPVGRVETGVLKPGDKVIFLPADKQGDVKSIEMHH----EPLQQAEPGDNIGFIAKNDIKRGDVCGHLDTPPTVVKAFTAQIIVLNHPSVIAPGYKPVFHVHTAQVACRIDEIVKTLNPKDGTTLKEKPDFIKNDVAIVKVIPDKPLVIE.................................................................................................................................................................................................................................. 396
20 -21.300[R] COG5258 GTPase  ali follow..  20  109........TVVALGNVDAGKSTLVGVLTVLTGRTSAVSLRLLFSGDKVVNHGLIDPLDEAEYKRSDKLVLLVDVGGHERYLRTALRGLFSPDYVMLVVAANSGVQKMTKEHLGIAVAIGIPVFVVVTRIDITPSEFQKTVEEVVRILKMPGV---------------------------------------------SKIPYIIKDTNDVVLA----------------AKAMPAGRVAPVFYVSSVTGHGLDLLLRFLSLLPRRR------------------RWDYGGEFLMYISDIYLVKGVGVVIGGLVEKGILHVGDRVWLGPYSDGKWMQTVVKSIHFNRTPVESAKAGSFITVAKVEKVEKGMVLSARP................................................................................................................................................................................................................................................................................................................... 425
21 -18.700[U] KOG0090 Signal recognition particle receptor, beta subunit (small G protein superfamily)  ali follow..  18  53....TKSNTVLLSGLSGSGKTVLFYQLRDGSSHQGAVTSM------EPNEGTFVLHNENNTKKGKVKPVHLIDVPGHSRLISKLEEYLPRAAAVVFVVDALEFLPNIRAAS-ASVIKNKTPVLLCCNKTDKVTA---HTKEFIRKQMEKEIDKLRVSRSAIST----ADIANDFTLGIEGEVFSFSHCHNKVTVAEASGLTGETDQVQEFIREHVK................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 259
22 -17.800[E] COG4917 Ethanolamine utilization protein  ali follow..  17  1......MKRIAFVGSVGAGKTTLFNALQGNYTLARKTQAV------------------------EFNDKGDIDTPGEYFNHPRWYHALITVDMLIYVHGANDPESRLPAGLLDIGV--SKRQIAVISKTDMPDADVAATRKLLLETGFEEPM-FELNSHDPQSVQQLVDYLASLT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 146
23 -17.400[J] COG0532 Translation initiation factor 2 (IF-2; GTPase)  ali follow..  19  448.........VTIMGHVDHGKTTLLDRFRESRVTEGEAG-------------GITQHIGAYQIKANGKKITFLDTPGHEAFTSMRARGASVTDITILVVAADDGVMPQTIEAINHSKAAGVPIIVAINKIDKPGANPQRVTQELTEH-----------------------------------------------------------------------------GVFPVAWDPENGSEFVEI---SAKFNQNLDELLDTVL-----------------VAEVQELKADPTVRAIGTVVEARLDQGKGAIATLLVQQGTLHVQDPIVVGNT------GRVRTMTNDLGRRIKEAGPSTPIELTGLSDVQAGDHFAVFEDEKAARAAEGQTKSVNIIIKADVQGSAEALAASLQKIEVEGVKVDI---------VHSAVGAIS-DISLAAASNAFNVRPTGLAREQAAQEEVD-----------------LHSIIYKVIEEVETAMRGMLDPEFKEEIIGEAIVRETFN----VSKVGTIAGFMVIRGKVAIHDGAIASLKHFKDDVKEVGN.................................................................................................................. 913
24 -14.000[R] COG0218 Predicted GTPase  ali follow..  13  23....DELPEIALAGRSNVGKSSFINTMLNRKNLAR-----------TSGKPGKT---QLLNFFNIDDKMRFVDVPGY-CMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEFLKYYEIPVIIVATKADKIPGKWNKHESAIKKKLNFDPSDDFILFSSVSK-AGMDEAWD............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 189
25 -13.100[U] KOG0077 Vesicle coat complex COPII, GTPase subunit SAR1  ali follow..  14  14LGLWQKEAKILFLGLDNAGKTTLLHMLK----------------DERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYD-SKRELDALLSDEALATVPFLILGNKIDIPYA---ASEDELRYHLGLTNF................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 151
26 -13.100[R] COG3596 Predicted GTPase  ali follow..  13  41.........IGIMGKTGAGKSSLCNALFAGEVSP------------VSDVAACTRDPLRFRLQIGEHFMTIVDLPGVGEYAALYREQLPRLDLILWLIKADDRALATDEHFYRQVIGERHKMLFVISQSDKAEPT--------------------------------------------------SGGNILSTEQKQNISRKICLLHELFQP-------------------------VHPVCAVSVRLQWGLRVMAERMIKCLPREPSSPVVALLQHPFRTWVAREQARDDFGETVDTILDTVSTFPLIPAPVRTIIQAVRSSVVSVARAVWDFF............................................................................................................................................................................................................................................................................................................................................................ 288
27 -13.100[U] KOG0070 GTP-binding ADP-ribosylation factor Arf1  ali follow..  14  15....KKEMRILMVGLDAAGKTTILYKLK----------------LGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSND-ARDELHRMLNEDELRDAVLLVFANKQDLPNA---MNAAEITDKLGLHSLCATSGEGLYEGLDWLSNNIASKA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 181
28 -13.000[R] COG1084 Predicted GTPase  ali follow..  18  160....LDAFTVVIAGFPNVGKSTLLRTL---TGAEPEVADY-----------FTTKGIQIGHLERKWKRIQVIDTPGLLDRPVEMVALENIADVIMFIFDASETCESQYSLYLGIRSVFDIPVVTVFNKMDLAENV-----KYLEEYINMVEDPLKVSAFEGRGVSKIIKKLEG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 323
29 -13.000[U] KOG0071 GTP-binding ADP-ribosylation factor Arf6 (dArf3)  ali follow..  14  19....NKEMRILMLGLDAAGKTTILYKLK----------------LNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSAD-ARQELHRIISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLDKLKDRLWNVQPTCALTGDGLLEGLA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 175
30 -13.000[R] COG1100 GTPase SAR1 and related small G proteins  ali follow..  15  12LWGSNKELRILILGLDGAGKTTILYRLQ----------------IGEVVTTKPTIGFNVETLSYKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTD-ASKELHLMLQEEELQDAALLVFANKQDQPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVIKEEQ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 182
31 -12.800[UZ] KOG0073 GTP-binding ADP-ribosylation factor-like protein ARL2  ali follow..  16  10MKQKERELRLLMLGLDNAGKTTILKKFN----------------GEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSAD-CQRELQSLLVEERLAGATLLIFANKQDLPGALSSNAIRE............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 140
32 -12.800[R] KOG0075 GTP-binding ADP-ribosylation factor-like protein  ali follow..  17  18....KEEMELTLVGLQFSGKTTFVNVI--------ASGQFAEDMIP-------TVGFNMRKITRGNVTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADASRNELHSLLDKPQLAGIPVLVLGNKRDLPGALDETGLIE............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 145
33 -12.800[U] KOG0072 GTP-binding ADP-ribosylation factor-like protein ARL1  ali follow..  14  15....SREMRILILGLDGAGKTTILYRLQ----------------VGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSAD-SKDELLYMLREEELAGAILVVLANKQDMDGC---MTVAEVHHALGLENL................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 148
34 -12.700[R] KOG0074 GTP-binding ADP-ribosylation factor-like protein ARL3  ali follow..  15  11KSAPDQEVRILLLGLDNAGKTTLLKQLA----------------SEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYFENTDILIYVIDSAD-TGQELAELLEEEKLSCVPVLIFANKQDLLTA---APASEIAEGLNLHTI................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 148
35 -12.500[R] COG1160 Predicted GTPases  ali follow..  11  6.........VALVGRPNVGKSTLFNRLTRTRDAL------------VADFPGLTRDRKYGHAHIAGYDFIVIDTGGEEKMAEQSLLAIDEADIVLFLVDARAGLTAADIGIANYLRQRNKITVVVANKTDGIDADSHCAEFYQLGLGEIEQIAASQGRGVTQLMEQVLAPFAEKMENADENDRTSEEEQDEWEQEFDFDSEEDTALIDDALDEELEEEQDKNIKIAIVGRPNVGKSTLTNRILGEDRV---VFDMPGTTRDSIYIPMERDGQQYTLIDTAGVRKRGKVHLAVEKFSVILTIDARENISDQDLSLLGFILNAGRSLVIVVNKWDGLDQKDRVKSELDRRLDFIDFARVHFISALHGSGVGNLFDSIKEAYACATQKMTTSLLTRILQMATDEHQPPMIGGRRPGGYNPPIIVVHGNQ------MDKLPDSYKRYLSNYYRKSLKIRLLFQEGSNPFAGRKNKLTPNQLRKRKR......................................................................................................................................................................................................... 494
36 -12.100[O] KOG0448 Mitofusin 1 GTPase, involved in mitochondrila biogenesis  ali follow..  77........KVAFFGRTSSGKSSVINAMLKSVKTVNQLAHALHMDKDLKAGCLVRVFWPKAKCALLRDDLVLVDSPG--ELDSWIDKFCLDADVFVLVANSESTLMNTEKHFFHKVNEWKPNIFILNNRWDASASEPEYMEDVRRQHMERCLHFLVEELKVANALEAQNRIFFVSAKE-----------VLSARKQKAQGMPESGVALAEGFHARLQEFQNFEQIFEECISQSAVKTKFEQHTIRAKQILATVKNIMDSVNLAAEDKRHYSVEEREDQIDRLDFIRNQMNLLTLDVKKKIKEVTEEVANKVSCAMTDEICRSVLVDEFCSEFHPNPDVLKIYKSELNKHIEDGMGRNL------------------------------ADRCTDEVNALVLQTQQEIIENLKPLLPA--GIQDKLHTLIPCKKFDLSYNLNYHKLCSDFQEDIVFRFSLGWSSLVHRFLGPRNAQRVLLGLSEPIFQLPRSLASTPTAPTTPATPDNASQEELMITLVTGLASVTSRTMGIIIVGGVIIGWKLLSVSLTMYGALYLYERLSWTT---AKERAFKQQFVNYATEKLRMIV-------SSTSANCSHQVKQQIATTFARLCQQVDITQKQLEEEIARLPKEIDQLEKIQNNSKLLRNKAVQLENELENFTKQFLPSSNEES..... 741
37 -11.900[R] COG2229 Predicted GTPase  ali follow..  14  5........KIIFTGPVGVGKTTAIAAISDEALVQTDASASDMTL-DRKRNTTVAMDYGAISLD-EDTKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNARTNPLKDLEFFLHSFRGKAPVVVGITKMDIRSQPGIDVYHKYLAKHNLNVPVFEIDARKEDDVKQLVSAMLFSI............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 172
38 -11.500[R] KOG2486 Predicted GTPase  ali follow..  17  133....DGLPEFALVGRSNVGKSSLLNSLVRRKRLAL-----------TSKKPGKT---QCINHFRINDKWYLVDLPGY-KFTKDYFLNRSTLVSVFLLVDASIPVKPIDLEYASWLGQNQVPMTLIFTKCDKRKKK.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 262
39 -11.100[U] KOG0076 GTP-binding ADP-ribosylation factor-like protein yARL3  ali follow..  14  15....KEQYSILILGLDNAGKTTFLETLKKEYSLAFKALEKIQPTV------GQNVATIPVD---SKQILKFWDVGGQESLRSMWSEYYSLCHGIIFIVDSSD-CSTTLQSVVMDEEIEGVPILMLANKQDRQDRMEVQDIKEVFNKIAEHISARDSRVGVKDAIEWMIVRLERNK............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 190
40 -11.100[OK] COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase  ali follow..  15  1...MKRPLIIGVGGPVGAGKTMLIERLTYLSTKGYSMAAITNDIYTKEDARILLNTSVLMCDKHPDLQLLFLESGGDNLSATFSPD---LVDFSIYIIDVAQGEKIPR----KGGQGMIKSDLFIINKVDYVGANVEVMKADTL-KSRGNKDFFVTNLKTDEGLKSVADWIEKR............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 198
41 -11.000[TU] KOG1954 Endocytosis/signaling protein EHD1  ali follow..  13  87.PDFDAKPMILLVGQYSTGKTTFIRYLLESDFPGIRIGPIAVMHGDEEGSIPGNALVVDAKKQFRALSVTIVDTPGGYDFTGVLEWFAERVDRIILLFDAHKDISDEFKRCIEALAGNEDKIRIVLNKSDMVDQQLMRVYGALMWSL--------------GKVFKTPEVSRVYLGSFWDHPLHYDLNRRLFQDEQHDLFQDLQALPRNAALRKLND.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 330
42 -10.900[R] KOG1490 GTP-binding protein CRFG/NOG1 (ODN superfamily)  ali follow..  11  166....PNTRTVLICGYPNVGKSSFMNKVTRADVDVQPY--------------FTTKSLFVGHTDYKYLRYQVIDTPGILD-SITALAHLRAAVLFFLDISGSCGYTIAQQAALFHSIKSLFPLVIVCNKTDLMPMNISEEDRKLIEEMKSEAMKTAM--GVMSVKNAACERLLDQRVEAKMKSKKINDHLNRFHVAIPKPRDSIERLPCIPQVVLEAKAKEAAAMEKRKTEKDLEEENGGAGVYSASLKKNYMPEILDGHNVADFIDPDILQRLAELEREEGIREAGVEEADMEMDIEKLSDEQ--------LKQLSEIRKKKAILIKNHRLKKTVAQNRSTVPRKFDKDKKYTTKRMGRELSAMGLDPSSAMDRARSKSRGRKRDRSEDAGNDAMDVDDEQQSNKKQRVRSKSRAMSISRSQSRPPAHEVVPGEGFKDSTQKLSAIKISNKSHKKRDNARRGEADRVIPTLRPKHLFSGKRGKGKTDR................................................................................................................................................................................................... 670
43 -10.600[R] COG1159 GTPase  ali follow..  13  11.........IAIVGRPNVGKSTLLNKLL---------GQKIS----TSRKAQTTRHRIVGIHTEGPYQAIYVDTPG---MNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLRDGKAPVILAVNKVDNVQ----------------------------------------------------------------------------------------EKVDLLPHLQFLASQMNFLDIVPISAETGMNVDTIAGIVRKHLPAIHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVTNERGGYDINGLILVEREGQKKMVAKIKTIGIEARKDMQEMFEAPVHLELWVK............................................................................................................................................................................................................................................................................................................................... 280
44 -9.980[P] COG0370 Fe2+ transport system protein B  ali follow..  12  5........TYCILGNPNTGKTSLFNAL---TGSYEYVGN------------GVTVEKKVGT--LRSKTGKLIDLPGIYDLNPISRDLEEKFDCMLNIVDSSQ---ERNLNLTVQLLEYGAPVVMGLNMIDVAAGRIHLNIQNLAKKLRIPILPVVA---SGKGTEDILSTLSEKH---APAIPLVLQYGEPAEKAIKEIQALTKELIPAKQSRWLAIQFLSKNEVTEAFLTSNSAFEQLQQIRAELESELNGKLENHF--------HQVRASYIHDICLTSVEYTRNSDIPLSDKLDKIFTHKLLGIPIFLGIMWLIFQITFTWVGAPLSDMLDGFIGGSLTDWVTSFLTTIGASGFIIDLVADGIIAG-----------VGGVLVFVPQILVIF--EDSGYMARIAVVMDRVME-----IFGLNGKAFIPMIIGFGCNVPGIMAARSESKERTLTILVSPFMSCSARLPVYALFVGVFFEKHQALVVLSLYVIGIKTILKKDNSVFVVELPPYRLPKTLWRSTWEKGKGFLRK---AGTFIFAGSVIIWLLNYAGPSGLDVP--------MGESFLAIIGGMLAPLLVPLGFGTWQAGATLIPGFLAKEVVVSTM................................................................... 584
45 -9.750[R] KOG0395 Ras-related GTPase  ali follow..  13  14.VPAKNSYRMVVLGASRVGKSSIVSRFL------GRFEDQYTPTIEDFHRKVYNIRGDMY-------QLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRESFDEVKRLKTKEAAELPMVICGNKNDHGELCRQVPTTEAELLVSGD-VSAKKNTNVDEMFYVLFSMAKLP............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 193
46 -9.710[S] COG1739 Uncharacterized conserved protein  ali follow..  10  75.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................SGSAGRPILGQIDSVGITDVLVVVV---FGGTLLGVPGLIHAYKEATAQALAVAEVVEKNIEKTVWLKCEYPFLNEAIRIAKQYQADILERDLQLD--CRLTVSLSLVNYEACVAAWKNTRQIEVNTE.............................. 199
47 -9.530[K] KOG1534 Putative transcription factor FET5  ali follow..  13  6.........AFVCGVASSGKSTFCGALMYMKSVGRSCHLVNLDPAAENFEWEPTVDIRDLEIGDYDEDYLIFDMPGQIELIRHLQVTLNFRPCAVYLLESQFLVDRTK-SAMSAMVMMEVPHINLLSKMDLLKDNNNITKAELKRFLNTDP--------------------------------------------------------LLLTGEINETTNPKFHELNRCIVQLIDDFNMVNFLPLESGNEESVSRVLSYIDDAT.................................................................................................................................................................................................................................................................................................................................................................................................................................... 253
48 -9.470[R] KOG0394 Ras-related GTPase  ali follow..  16  3.SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATI-----------GADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWRESDPENFPFVLIGNKVDVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 173
49 -9.340[U] KOG0096 GTPase Ran/TC4/GSP1 (nuclear protein transport pathway), small G protein superfamily  ali follow..  13  7.NGEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATI-----------GVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRNIPIVLCGNKVDVKERKVKAKTITFHRKKNLQYYDISAKSNYEKPFLWLARKLAGNP............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 174
50 -9.280[R] KOG0080 GTPase Rab18, small G protein superfamily  ali follow..  17  3.EDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATI-----------GVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDTFVKLDNWLNELETYCTRNDIVNMLVGNKID......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 125
51 -9.230[E] COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family  ali follow..  14  57.........LGVTGTPGAGKSTFLEAFGLLIREGLKVAVIAVDPSSPVTGGSIRARELMLLCEAAGYDVVIVETVGVGQSETEVAR---MVDCFISLQIAGGGDDLQGI----KKGLMEVADLIVINKDDGDNHNVAIARHMYESALEWQPRVLTCSALEKRGIDEIWHAIIDFKTALTASGRLQQVRQQQSVEWLRKQTE------EEVLNHLFANEDF--DRYYRQTLLAVKNNTLSPR--------TGLRQLSEFIQT...................................................................................................................................................................................................................................................................................................................................................................................................................................... 327
52 -9.210[U] KOG0094 GTPase Rab6/YPT6/Ryh1, small G protein superfamily  ali follow..  14  4.VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATI-----------GIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWRNERAGDVIIVLVGNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAAL............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 170
53 -9.200[TU] KOG0084 GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins  ali follow..  17  3.PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTI-----------GVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWDRYASENVNKLLVGNKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIK........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 170
54 -9.190[U] KOG0095 GTPase Rab30, small G protein superfamily  ali follow..  14  4.EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATI-----------GVGFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLI........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 171
55 -9.150[U] KOG0081 GTPase Rab27, small G protein superfamily  ali follow..  15  4.GDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDF----REKRVVYRASGATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDSFLNVRNWISQLQMHAYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIM........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 182
56 -9.140[R] KOG0088 GTPase Rab21, small G protein superfamily  ali follow..  14  7.DQKSFKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTI-----------QASFQNKTVNVEDCQADLHIWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWKTCLGNTAEILIVGNKIDLEEERQVTRQDAEAYAESEGALYMETSAQDNVGISDAFESLTAKMI........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 174
57 -9.130[DZU] KOG2655 Septin family protein (P-loop GTPase)  ali follow..  11  37........TLMVVGESGLGKSTLVNSLF--LTDLYPERIIPDAIEKQKQTVKLEASTVEIEERGVKLRLTVVDTPGFGDIDEQYERFLR-IHCCFYFISPFGHGLKPLDVEFMKKLHSKVNIVPVIAKADCLTKEILRLKCRIMQEIESHGIKI---CGANTLLEVKGKKVRGRLYPW-GVVEVENPDHCDFIKLRTMLITHMQDLQEVTQEVHYEN.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 296
58 -9.130[U] KOG0086 GTPase Rab4, small G protein superfamily  ali follow..  17  3.ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTI-----------GVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWRTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTIL........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 170
59 -9.110[U] KOG0092 GTPase Rab5/YPT51 and related small G protein superfamily GTPases  ali follow..  15  15.GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTI-----------GAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 181
60 -9.060[R] KOG1533 Predicted GTPase  ali follow..  11  36.........VLVIGAPGAGKSTFCAGLTIFSQTKRPFLTINLDPANDTMAYAPDVNILLQKIEANHKKYLIIDCPGQLELYKSEGELWKVIR-ALHLADSLYCSDPSK-STLATMVTMEMPQVNCLSKADLFSEDGTYDLEFFSHL---------------PDVNRLLDLLNEVP------------------------------------------GLEKYRKLNEAICGVISDFDLVSFVPLAVENKESMMKVIQMV........................................................................................................................................................................................................................................................................................................................................................................................................................................ 277

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Godzik A. Fold recognition methods. Methods Biochem Anal. 2003;44:525-46. Review.