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# Query Length Result vs. Range Score %id Covered by template(s)
1 d1dlwa_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Ciliate (Paramecium caudatum) [TaxId: 5885]} 116 COG1214 1-115 -47.200 24  [R] COG2346 Truncated hemoglobins
H.sapiens 9-116 -7.610 19  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 32-112 -4.110 10  PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;
JCSG1214 4-115 -5.640 13  TM0373 TM0373 282248 Purified-2001-03-14
NEW_HUMAN_DOMAINS 1-75 -5.780 16  sp|Q8N3U4|STAG2_HUMAN Cohesin subunit SA-2 OS=Homo sapiens GN=STAG2 PE=1 SV=3 (Range: 83-153)
PDB1214 1-116 -69.700 100  1dlw_A mol:protein length:116 HEMOGLOBIN
PfamA27U 1-115 -49.500 24  PF01152.16; Q7CX73_AGRT5/7-128; Bacterial-like globin
SCOP175 1-115 -66.700 35  d1idra_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbN [TaxId: 1773]}
VFDB 3-101 -4.970 VFG1961 (gi:15792751) Cj1433c - hypothetical protein Cj1433c [Campylobacter jejuni NCTC 11168] (VF0323)
2 d1s69a_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Cyanobacteria (Synechocystis sp.), pcc 6803 [TaxId: 1143]} 123 COG1214 1-123 -44.200 22  [R] COG2346 Truncated hemoglobins
H.sapiens 4-117 -7.620 13  sp|Q6DN90|IQEC1_HUMAN IQ motif and SEC7 domain-containing protein 1 OS=Homo sapiens GN=IQSEC1 PE=1 SV=1 (Range: 601-900)
HGM_OVER 32-118 -4.610 11  PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;
JCSG1214 1-122 -6.040 17  SP16989B YP_001298078.1 409666 Selected-2009-11-12
NEW_HUMAN_DOMAINS 3-123 -6.340 11  sp|Q9Y2D4|EXC6B_HUMAN Exocyst complex component 6B OS=Homo sapiens GN=EXOC6B PE=1 SV=3 (Range: 287-418)
PDB1214 1-123 -73.800 100  1s69_A mol:protein length:124 Cyanoglobin
PfamA27U 2-123 -46.200 23  PF01152.16; Q7CX73_AGRT5/7-128; Bacterial-like globin
SCOP175 1-122 -61.600 34  d1idra_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbN [TaxId: 1773]}
VFDB 60-104 -5.370 22  VFG2294 (gi:3478671) C2I - C2 toxin (component-I) [Clostridium botulinum] (VF0384)
3 d1idra_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbN [TaxId: 1773]} 127 COG1214 4-127 -48.400 17  [R] COG2346 Truncated hemoglobins
H.sapiens 2-127 -8.660 13  sp|P09105|HBAT_HUMAN Hemoglobin subunit theta-1 OS=Homo sapiens GN=HBQ1 PE=1 SV=2
HGM_OVER 8-103 -4.310 15  PB004996 Q5NNS6_ZYMMO/1-150 PB004996; Pfam-B_4996;
JCSG1214 1-116 -6.300 11  XB5476A NP_810591.1 358614 Crystal|NMR-2005-07-03
NEW_HUMAN_DOMAINS 1-90 -6.370 12  tr|F8WCB3|F8WCB3_HUMAN Uncharacterized protein OS=Homo sapiens GN=STAG1 PE=4 SV=1 (Range: 73-161)
PDB1214 1-127 -71.000 100  1idr_A mol:protein length:136 HEMOGLOBIN HBN
PfamA27U 13-127 -49.600 18  PF01152.16; Q7CX73_AGRT5/7-128; Bacterial-like globin
SCOP175 13-127 -66.700 35  d1dlwa_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Ciliate (Paramecium caudatum) [TaxId: 5885]}
VFDB 15-113 -4.960 13  VFG1961 (gi:15792751) Cj1433c - hypothetical protein Cj1433c [Campylobacter jejuni NCTC 11168] (VF0323)
4 d1ngka_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbO [TaxId: 1773]} 126 COG1214 1-125 -73.600 32  [R] COG2346 Truncated hemoglobins
H.sapiens 7-124 -6.950 13  sp|Q96BM9|ARL8A_HUMAN ADP-ribosylation factor-like protein 8A OS=Homo sapiens GN=ARL8A PE=1 SV=1
HGM_OVER 1-108 -5.010 16  PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;
JCSG1214 13-107 -8.050 17  TM0603 TM0603 282476 PDB-2004-09-16
NEW_HUMAN_DOMAINS 13-87 -6.460 15  sp|A2RRP1|NBAS_HUMAN Neuroblastoma-amplified sequence OS=Homo sapiens GN=NBAS PE=1 SV=2 (Range: 2301-2371)
PDB1214 1-126 -85.600 100  1ngk_A mol:protein length:128 Hemoglobin-like protein HbO
PfamA27U 2-124 -74.500 32  PF01152.16; Q7CX73_AGRT5/7-128; Bacterial-like globin
SCOP175 1-124 -74.400 38  d1ux8a_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Bacillus subtilis [TaxId: 1423]}
VFDB 9-98 -5.610 21  VFG1555 (gi:23954239) orf20 - hypothetical protein [Escherichia coli 536]
5 d1ux8a_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Bacillus subtilis [TaxId: 1423]} 119 COG1214 1-119 -74.400 42  [R] COG2346 Truncated hemoglobins
H.sapiens 9-119 -7.490 15  sp|O95486|SC24A_HUMAN Protein transport protein Sec24A OS=Homo sapiens GN=SEC24A PE=1 SV=2 (Range: 751-1050)
HGM_OVER 16-113 -5.330 18  PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;
JCSG1214 12-110 -7.440 10  TM0603 TM0603 282476 PDB-2004-09-16
NEW_HUMAN_DOMAINS 54-98 -6.340 22  sp|Q5VTT2|CI135_HUMAN Uncharacterized protein C9orf135 OS=Homo sapiens GN=C9orf135 PE=1 SV=1 (Range: 1-229)
PDB1214 1-119 -80.200 100  1ux8_A mol:protein length:132 YJBI PROTEIN
PfamA27U 2-119 -76.100 43  PF01152.16; Q7CX73_AGRT5/7-128; Bacterial-like globin
SCOP175 1-119 -74.400 38  d1ngka_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbO [TaxId: 1773]}
VFDB 1-104 -5.140 VFG1129 (gi:15641799) VC1796 - middle operon regulator-related protein [Vibrio cholerae N16961]
6 d1kr7a_ a.1.1.4 (A:) Nerve tissue mini-hemoglobin (neural globin) {Milky ribbon-worm (Cerebratulus lacteus) [TaxId: 6221]} 110 COG1214 2-109 -28.100 13  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 2-110 -39.600 20  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 5-107 -3.880 PB017124 _Gut.Meta.Jp.0039711_ gi|162659581|dbj|BAAX01000024.1||2 (+ 385:1498~0 complete)
JCSG1214 5-108 -8.500 13  SP19120A NP_249151.1 413330 Selected-2009-11-12
NEW_HUMAN_DOMAINS 1-76 -5.850 11  sp|Q6ZUI0|TPRG1_HUMAN Tumor protein p63-regulated gene 1 protein OS=Homo sapiens GN=TPRG1 PE=2 SV=1 (Range: 173-275)
PDB1214 1-110 -59.600 100  1kr7_A mol:protein length:110 Neural globin
PfamA27U 2-88 -36.100 34  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 2-110 -42.700 16  d2gdma_ a.1.1.2 (A:) Leghemoglobin {Yellow lupin (Lupinus luteus) [TaxId: 3873]}
VFDB 1-110 -5.020 10  VFG2073 (gi:15595285) PA0087 - hypothetical protein [Pseudomonas aeruginosa PAO1] (VF0334)
7 d3sdha_ a.1.1.2 (A:) Hemoglobin I {Ark clam (Scapharca inaequivalvis) [TaxId: 6561]} 145 COG1214 9-145 -32.800 17  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 1-145 -56.600 22  sp|Q8WWM9|CYGB_HUMAN Cytoglobin OS=Homo sapiens GN=CYGB PE=1 SV=1
HGM_OVER 1-62 -6.900 PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
JCSG1214 10-144 -8.320 PG9814B NP_284435.1 372229 Purified-2006-12-13
NEW_HUMAN_DOMAINS 36-145 -7.050 13  sp|P21359|NF1_HUMAN Neurofibromin OS=Homo sapiens GN=NF1 PE=1 SV=2 (Range: 491-632)
PDB1214 1-145 -67.500 98  2grf_A mol:protein length:146 Globin-1
PfamA27U 5-145 -11.700 10  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
13-118 -41.400 17  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 8-145 -59.400 23  d1mbaa_ a.1.1.2 (A:) Myoglobin {Slug sea hare (Aplysia limacina) [TaxId: 6502]}
VFDB 14-140 -5.790 VFG1580 (gi:23954263) orf46 - hypothetical protein [Escherichia coli 536]
8 d1b0ba_ a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) [TaxId: 29163]} 142 COG1214 2-140 -37.100 15  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 2-141 -54.900 17  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 3-64 -5.220 PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
JCSG1214 3-137 -8.640 11  PG9814B NP_284435.1 372229 Purified-2006-12-13
NEW_HUMAN_DOMAINS 6-140 -7.930 sp|Q8IX21|F178A_HUMAN Protein FAM178A OS=Homo sapiens GN=FAM178A PE=1 SV=2 (Range: 727-883)
PDB1214 1-142 -67.100 100  1b0b_A mol:protein length:142 HEMOGLOBIN
PfamA27U 1-140 -12.600 10  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
6-114 -41.200 28  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 1-141 -58.300 27  d1mbaa_ a.1.1.2 (A:) Myoglobin {Slug sea hare (Aplysia limacina) [TaxId: 6502]}
VFDB 79-142 -5.690 VFG0498 (gi:16764747) sseA - Secretion system effector [Salmonella enterica (serovar typhimurium) LT2] (VF0321)
9 d1h97a_ a.1.1.2 (A:) Trematode hemoglobin/myoglobin {Paramphistomum epiclitum [TaxId: 54403]} 147 COG1214 2-146 -33.300 12  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 2-146 -50.600 14  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 3-66 -6.490 12  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
JCSG1214 3-142 -7.610 PG9814B NP_284435.1 372229 Purified-2006-12-13
NEW_HUMAN_DOMAINS 43-147 -7.750 tr|B5MEB3|B5MEB3_HUMAN Calcineurin binding protein 1, isoform CRA_c OS=Homo sapiens GN=CABIN1 PE=4 SV=1 (Range: 1-89)
PDB1214 1-147 -66.500 100  1h97_A mol:protein length:147 GLOBIN-3
PfamA27U 1-146 -10.000 11  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
6-116 -42.600 13  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 1-146 -57.700 13  d1x9fb_ a.1.1.2 (B:) Extracellular dodecameric hemoglobin (erythrocruorin), subunit II (globin B) {Common earthworm (Lumbricus terrestris) [TaxId: 6398]}
VFDB 60-121 -4.610 16  VFG0996 (gi:18462781) mxiH - MxiH, component of the Mxi-Spa secretion machinery [Shigella flexneri (serotype 2a) 301] (VF0118)
10 d1jl7a_ a.1.1.2 (A:) Glycera globin {Marine bloodworm (Glycera dibranchiata) [TaxId: 6350]} 147 COG1214 2-147 -59.300 18  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 2-147 -61.100 20  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 3-80 -5.050 11  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
JCSG1214 1-141 -6.540 SP19120A NP_249151.1 413330 Selected-2009-11-12
NEW_HUMAN_DOMAINS 3-85 -6.240 sp|Q16206|ENOX2_HUMAN Ecto-NOX disulfide-thiol exchanger 2 OS=Homo sapiens GN=ENOX2 PE=1 SV=2 (Range: 246-379)
PDB1214 1-147 -79.300 100  1jf3_A mol:protein length:147 monomer hemoglobin component III
PfamA27U 1-147 -11.500 12  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
6-111 -27.300 18  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 2-147 -64.000 22  d1cqxa1 a.1.1.2 (A:1-150) Flavohemoglobin, N-terminal domain {Alcaligenes eutrophus [TaxId: 106590]}
VFDB 1-130 -5.970 12  VFG0797 (gi:15804214) Z5104 - - [Escherichia coli O157:H7 EDL933]
11 d1a6ma_ a.1.1.2 (A:) Myoglobin {Sperm whale (Physeter catodon) [TaxId: 9755]} 151 COG1214 1-151 -35.800 12  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 1-151 -75.100 84  sp|P02144|MYG_HUMAN Myoglobin OS=Homo sapiens GN=MB PE=1 SV=2
HGM_OVER 3-58 -5.410 14  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
JCSG1214 2-148 -7.100 15  SC.C21117A.SIN3A BC052716 429159 Purified-2014-04-10
NEW_HUMAN_DOMAINS 3-149 -6.400 10  sp|Q5TH69|BIG3_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo sapiens GN=ARFGEF3 PE=1 SV=3 (Range: 1440-1626)
PDB1214 1-151 -76.400 98  3k9z_A mol:protein length:153 Myoglobin
PfamA27U 2-150 -12.300 12  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
6-112 -36.400 21  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 2-151 -70.100 32  d1urva_ a.1.1.2 (A:) Cytoglobin {Human (Homo sapiens) [TaxId: 9606]}
VFDB 16-130 -5.240 11  VFG2055 (gi:82778259) gspL - putative general secretion pathway for protein export [Shigella dysenteriae Sd197] (VF0333)
12 d1mbaa_ a.1.1.2 (A:) Myoglobin {Slug sea hare (Aplysia limacina) [TaxId: 6502]} 146 COG1214 2-141 -32.500 15  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 1-146 -56.700 31  sp|Q8WWM9|CYGB_HUMAN Cytoglobin OS=Homo sapiens GN=CYGB PE=1 SV=1
HGM_OVER 3-63 -5.320 23  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
JCSG1214 3-140 -7.610 PE00071B YP_208077.1 368157 Crystal|NMR-2006-08-05
NEW_HUMAN_DOMAINS 40-94 -6.980 tr|B5MEB3|B5MEB3_HUMAN Calcineurin binding protein 1, isoform CRA_c OS=Homo sapiens GN=CABIN1 PE=4 SV=1 (Range: 1-89)
PDB1214 1-146 -68.900 100  1mba_A mol:protein length:147 MYOGLOBIN
PfamA27U 1-145 -13.900 13  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
6-113 -44.900 29  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 1-142 -59.600 15  d1itha_ a.1.1.2 (A:) Hemoglobin {Innkeeper worm (Urechis caupo) [TaxId: 6431]}
VFDB 10-143 -5.390 VFG0985 (gi:18462578) ipaD - IpaD, secreted by the Mxi-Spa machinery, required for entry of bacteria into epithelial cells [Shigella flexneri (serotype 2a) 301] (VF0118)
13 d1ecda_ a.1.1.2 (A:) Erythrocruorin {Midge (Chironomus thummi thummi), fraction III [TaxId: 7154]} 136 COG1214 1-134 -34.000 16  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 1-135 -52.000 14  sp|P69891|HBG1_HUMAN Hemoglobin subunit gamma-1 OS=Homo sapiens GN=HBG1 PE=1 SV=2
HGM_OVER 2-58 -4.590 PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
JCSG1214 1-136 -7.760 10  SP19120A NP_249151.1 413330 Selected-2009-11-12
NEW_HUMAN_DOMAINS 28-136 -7.550 sp|Q9Y2D4|EXC6B_HUMAN Exocyst complex component 6B OS=Homo sapiens GN=EXOC6B PE=1 SV=3 (Range: 287-418)
PDB1214 1-136 -66.500 100  1eca_A mol:protein length:136 ERYTHROCRUORIN (AQUO MET)
PfamA27U 1-135 -12.100 11  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
5-105 -46.600 50  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 1-132 -55.100 17  d1itha_ a.1.1.2 (A:) Hemoglobin {Innkeeper worm (Urechis caupo) [TaxId: 6431]}
VFDB 1-136 -4.770 VFG0588 (gi:16764445) pipA - Pathogenicity island encoded protein: SPI3 [Salmonella enterica (serovar typhimurium) LT2]
14 d2gdma_ a.1.1.2 (A:) Leghemoglobin {Yellow lupin (Lupinus luteus) [TaxId: 3873]} 153 COG1214 3-151 -56.000 20  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 3-152 -64.000 20  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 4-45 -3.550 PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
JCSG1214 3-141 -7.150 16  SP17028A ZP_02070525.1 409540 Selected-2009-11-12
NEW_HUMAN_DOMAINS 5-152 -9.270 sp|Q9Y6D5|BIG2_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Homo sapiens GN=ARFGEF2 PE=1 SV=3 (Range: 1250-1487)
PDB1214 1-153 -81.100 100  1gdi_A mol:protein length:153 LEGHEMOGLOBIN (CARBONMONOXY)
PfamA27U 2-153 -15.600 11  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
7-115 -35.000 19  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 2-151 -62.700 19  d1jl7a_ a.1.1.2 (A:) Glycera globin {Marine bloodworm (Glycera dibranchiata) [TaxId: 6350]}
VFDB 6-139 -7.960 10  VFG1610 (gi:23954292) orf76 - hypothetical protein [Escherichia coli 536]
15 d1cg5a_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Cartilaginous fish akaei (Dasyatis akajei) [TaxId: 31902]} 141 COG1214 1-139 -34.300 17  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 1-141 -68.700 40  sp|Q6B0K9|HBM_HUMAN Hemoglobin subunit mu OS=Homo sapiens GN=HBM PE=2 SV=1
HGM_OVER 17-127 -5.420 14  PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;
JCSG1214 3-141 -6.980 SC.C21117A.SIN3A BC052716 429159 Purified-2014-04-10
NEW_HUMAN_DOMAINS 7-137 -6.090 sp|Q15058|KIF14_HUMAN Kinesin-like protein KIF14 OS=Homo sapiens GN=KIF14 PE=1 SV=1 (Range: 1236-1536)
PDB1214 1-141 -76.200 100  1cg5_A mol:protein length:141 PROTEIN (HEMOGLOBIN)
PfamA27U 2-140 -11.900 13  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
6-107 -36.100 19  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 2-141 -72.000 38  d3d1ka1 a.1.1.2 (A:1-142) Hemoglobin, alpha-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]}
VFDB 26-134 -5.100 VFG0441 (gi:17233493) spvR - Salmonella plasmid virulence: regulation of spv operon, lysR family [Salmonella enterica (serovar typhimurium) LT2] (VF0107)
16 d3d1ka1 a.1.1.2 (A:1-142) Hemoglobin, alpha-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]} 142 COG1214 2-140 -36.400 18  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 2-142 -70.900 36  sp|Q6B0K9|HBM_HUMAN Hemoglobin subunit mu OS=Homo sapiens GN=HBM PE=2 SV=1
HGM_OVER 3-77 -5.050 13  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
JCSG1214 2-142 -7.030 12  TM0850 TM0850 282720 Purified-2003-11-26
NEW_HUMAN_DOMAINS 3-139 -7.600 10  sp|Q5TH69|BIG3_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo sapiens GN=ARFGEF3 PE=1 SV=3 (Range: 1440-1626)
PDB1214 1-142 -76.200 100  1la6_A mol:protein length:143 Hemoglobin alpha-1 chain
PfamA27U 1-141 -12.500 17  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
6-107 -36.000 15  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 2-142 -72.000 38  d1cg5a_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Cartilaginous fish akaei (Dasyatis akajei) [TaxId: 31902]}
VFDB 7-142 -4.970 VFG1580 (gi:23954263) orf46 - hypothetical protein [Escherichia coli 536]
17 d1cg5b_ a.1.1.2 (B:) Hemoglobin, beta-chain {Cartilaginous fish akaei (Dasyatis akajei) [TaxId: 31902]} 141 COG1214 3-139 -38.500 14  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 1-141 -70.600 34  sp|P02100|HBE_HUMAN Hemoglobin subunit epsilon OS=Homo sapiens GN=HBE1 PE=1 SV=2
HGM_OVER 4-77 -5.750 15  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
JCSG1214 1-136 -8.520 SP19120A NP_249151.1 413330 Selected-2009-11-12
NEW_HUMAN_DOMAINS 27-103 -6.380 sp|O94933|SLIK3_HUMAN SLIT and NTRK-like protein 3 OS=Homo sapiens GN=SLITRK3 PE=2 SV=2 (Range: 777-977)
PDB1214 1-141 -79.000 100  1cg5_B mol:protein length:141 PROTEIN (HEMOGLOBIN)
PfamA27U 1-140 -13.300 11  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
7-106 -37.900 18  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 1-141 -68.600 31  d3d1kb1 a.1.1.2 (B:1-146) Hemoglobin, beta-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]}
VFDB 1-141 -5.290 12  VFG1610 (gi:23954292) orf76 - hypothetical protein [Escherichia coli 536]
18 d3d1kb1 a.1.1.2 (B:1-146) Hemoglobin, beta-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]} 146 COG1214 1-72 -28.000 16  [C] KOG3378 Globins and related hemoproteins
3-141 -20.300 10  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 1-146 -79.100 43  sp|P02042|HBD_HUMAN Hemoglobin subunit delta OS=Homo sapiens GN=HBD PE=1 SV=2
HGM_OVER 4-57 -5.620 13  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
JCSG1214 27-145 -6.520 SP19260A YP_094451.1 412214 Purified-2010-09-29
NEW_HUMAN_DOMAINS 4-144 -5.530 tr|F8WDZ1|F8WDZ1_HUMAN Uncharacterized protein OS=Homo sapiens PE=4 SV=1 (Range: 225-420)
PDB1214 1-146 -79.700 42  1y22_B mol:protein length:146 Hemoglobin beta chain
PfamA27U 7-111 -38.700 12  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 3-146 -68.900 21  d1a6ma_ a.1.1.2 (A:) Myoglobin {Sperm whale (Physeter catodon) [TaxId: 9755]}
VFDB 13-120 -5.140 VFG0441 (gi:17233493) spvR - Salmonella plasmid virulence: regulation of spv operon, lysR family [Salmonella enterica (serovar typhimurium) LT2] (VF0107)
19 d1gcvb_ a.1.1.2 (B:) Hemoglobin, beta-chain {Houndshark (Mustelus griseus) [TaxId: 89020]} 136 COG1214 3-134 -36.400 11  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 1-136 -70.900 35  sp|P02100|HBE_HUMAN Hemoglobin subunit epsilon OS=Homo sapiens GN=HBE1 PE=1 SV=2
HGM_OVER 4-71 -5.860 15  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
JCSG1214 3-136 -7.620 TM0850 TM0850 282720 Purified-2003-11-26
NEW_HUMAN_DOMAINS 9-131 -5.620 11  sp|Q9Y6D5|BIG2_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Homo sapiens GN=ARFGEF2 PE=1 SV=3 (Range: 1600-1785)
PDB1214 1-136 -76.100 100  1gcv_B mol:protein length:136 HEMOGLOBIN
PfamA27U 1-135 -10.900 14  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
7-101 -32.000 15  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 1-136 -68.700 40  d3d1kb1 a.1.1.2 (B:1-146) Hemoglobin, beta-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]}
VFDB 42-133 -5.730 VFG0195 (gi:15596897) pcr2 - conserved hypothetical protein in type III secretion [Pseudomonas aeruginosa PAO1] (VF0083)
20 d1it2a_ a.1.1.2 (A:) Hagfish hemoglobin {Inshore hagfish (Eptatretus burgeri) [TaxId: 7764]} 146 COG1214 2-80 -31.600 22  [C] KOG3378 Globins and related hemoproteins
11-142 -24.200 11  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 8-146 -61.100 23  sp|P02042|HBD_HUMAN Hemoglobin subunit delta OS=Homo sapiens GN=HBD PE=1 SV=2
HGM_OVER 12-71 -5.620 PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
JCSG1214 12-133 -7.510 11  PK9814B YP_413382.1 389379 Crystal|NMR-2008-06-26
NEW_HUMAN_DOMAINS 12-82 -5.790 14  sp|Q5EBM0|CMPK2_HUMAN UMP-CMP kinase 2, mitochondrial OS=Homo sapiens GN=CMPK2 PE=1 SV=3 (Range: 142-243)
PDB1214 1-146 -78.200 100  1it2_A mol:protein length:146 hemoglobin
PfamA27U 7-146 -10.800 PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
15-122 -40.700 20  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 10-146 -61.600 23  d1urva_ a.1.1.2 (A:) Cytoglobin {Human (Homo sapiens) [TaxId: 9606]}
VFDB 7-121 -5.440 13  VFG0478 (gi:16764063) fur - transcriptional repressor of iron-responsive genes (Fur family) (ferric uptake regulator) [Salmonella enterica (serovar typhimurium) LT2] (VF0113)


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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Pawlowski K, Jaroszewski L, Rychlewski L, Godzik A. Sensitive sequence comparison as protein function predictor. Pac Symp Biocomput. 2000;:42-53.