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# Query Length Result vs. Range Score %id Covered by template(s)
1 d1dlwa_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Ciliate (Paramecium caudatum) [TaxId: 5885]} 116 COG0614 1-115 -49.000 24  [R] COG2346 Truncated hemoglobins
H.sapiens 9-116 -7.820 19  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 32-112 -4.410 10  PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;
NEW_HUMAN_DOMAINS 1-75 -5.560 15  sp|Q8WVM7|STAG1_HUMAN Cohesin subunit SA-1 OS=Homo sapiens GN=STAG1 PE=1 SV=3 (Range: 73-156)
PDB0614 1-116 -68.600 100  1dlw_A mol:protein length:116 HEMOGLOBIN
PfamA27U 1-115 -50.900 24  PF01152.16; Q7CX73_AGRT5/7-128; Bacterial-like globin
SCOP175 1-115 -66.200 35  d1idra_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbN [TaxId: 1773]}
VFDB 1-104 -5.640 VFG1129 (gi:15641799) VC1796 - middle operon regulator-related protein [Vibrio cholerae N16961]
2 d1s69a_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Cyanobacteria (Synechocystis sp.), pcc 6803 [TaxId: 1143]} 123 COG0614 1-123 -49.400 20  [R] COG2346 Truncated hemoglobins
H.sapiens 4-117 -7.510 13  sp|Q6DN90|IQEC1_HUMAN IQ motif and SEC7 domain-containing protein 1 OS=Homo sapiens GN=IQSEC1 PE=1 SV=1 (Range: 601-900)
HGM_OVER 32-118 -4.460 11  PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;
NEW_HUMAN_DOMAINS 2-120 -6.260 11  sp|Q5TH69|BIG3_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo sapiens GN=ARFGEF3 PE=1 SV=3 (Range: 296-445)
PDB0614 1-123 -71.900 100  1s69_A mol:protein length:124 Cyanoglobin
PfamA27U 2-123 -51.600 20  PF01152.16; Q7CX73_AGRT5/7-128; Bacterial-like globin
SCOP175 1-122 -60.800 34  d1idra_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbN [TaxId: 1773]}
VFDB 2-109 -5.520 10  VFG1129 (gi:15641799) VC1796 - middle operon regulator-related protein [Vibrio cholerae N16961]
3 d1idra_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbN [TaxId: 1773]} 127 COG0614 4-127 -50.000 17  [R] COG2346 Truncated hemoglobins
H.sapiens 2-127 -8.270 15  sp|P09105|HBAT_HUMAN Hemoglobin subunit theta-1 OS=Homo sapiens GN=HBQ1 PE=1 SV=2
HGM_OVER 43-124 -4.290 11  PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;
NEW_HUMAN_DOMAINS 1-87 -6.850 16  sp|Q8WVM7|STAG1_HUMAN Cohesin subunit SA-1 OS=Homo sapiens GN=STAG1 PE=1 SV=3 (Range: 73-156)
PDB0614 1-127 -70.700 100  1idr_A mol:protein length:136 HEMOGLOBIN HBN
PfamA27U 13-127 -50.900 18  PF01152.16; Q7CX73_AGRT5/7-128; Bacterial-like globin
SCOP175 13-127 -66.200 35  d1dlwa_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Ciliate (Paramecium caudatum) [TaxId: 5885]}
VFDB 7-116 -6.190 VFG1129 (gi:15641799) VC1796 - middle operon regulator-related protein [Vibrio cholerae N16961]
4 d1ngka_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbO [TaxId: 1773]} 126 COG0614 1-125 -73.800 32  [R] COG2346 Truncated hemoglobins
H.sapiens 7-124 -7.390 13  sp|Q96BM9|ARL8A_HUMAN ADP-ribosylation factor-like protein 8A OS=Homo sapiens GN=ARL8A PE=1 SV=1
HGM_OVER 10-86 -5.640 15  PB004996 Q5NNS6_ZYMMO/1-150 PB004996; Pfam-B_4996;
NEW_HUMAN_DOMAINS 13-87 -6.280 15  sp|A2RRP1|NBAS_HUMAN Neuroblastoma-amplified sequence OS=Homo sapiens GN=NBAS PE=1 SV=2 (Range: 2301-2371)
PDB0614 1-126 -84.600 100  1ngk_A mol:protein length:128 Hemoglobin-like protein HbO
PfamA27U 2-124 -74.600 32  PF01152.16; Q7CX73_AGRT5/7-128; Bacterial-like globin
SCOP175 1-124 -73.100 39  d1ux8a_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Bacillus subtilis [TaxId: 1423]}
VFDB 9-98 -5.480 21  VFG1555 (gi:23954239) orf20 - hypothetical protein [Escherichia coli 536]
5 d1ux8a_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Bacillus subtilis [TaxId: 1423]} 119 COG0614 1-119 -73.800 42  [R] COG2346 Truncated hemoglobins
H.sapiens 23-93 -7.780 19  sp|Q86YV0|RASL3_HUMAN RAS protein activator like-3 OS=Homo sapiens GN=RASAL3 PE=1 SV=2 (Range: 1-300)
HGM_OVER 16-113 -5.160 18  PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;
NEW_HUMAN_DOMAINS 54-98 -6.410 22  sp|Q5VTT2|CI135_HUMAN Uncharacterized protein C9orf135 OS=Homo sapiens GN=C9orf135 PE=1 SV=1 (Range: 1-229)
PDB0614 1-119 -79.400 68  2bkm_A mol:protein length:128 TRUNCATED HEMOGLOBIN FROM GEOBACILLUS STEAROT
PfamA27U 2-119 -75.600 43  PF01152.16; Q7CX73_AGRT5/7-128; Bacterial-like globin
SCOP175 1-119 -73.100 39  d1ngka_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbO [TaxId: 1773]}
VFDB 2-74 -4.910 21  VFG1128 (gi:15641798) VC1795 - transcriptional regulator, putative [Vibrio cholerae N16961]
6 d1kr7a_ a.1.1.4 (A:) Nerve tissue mini-hemoglobin (neural globin) {Milky ribbon-worm (Cerebratulus lacteus) [TaxId: 6221]} 110 COG0614 2-110 -28.400 14  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 2-110 -39.700 19  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 5-102 -4.520 PB017124 _Gut.Meta.Jp.0039711_ gi|162659581|dbj|BAAX01000024.1||2 (+ 385:1498~0 complete)
NEW_HUMAN_DOMAINS 1-76 -5.730 11  sp|Q6ZUI0|TPRG1_HUMAN Tumor protein p63-regulated gene 1 protein OS=Homo sapiens GN=TPRG1 PE=2 SV=1 (Range: 173-275)
PDB0614 1-110 -59.700 100  1kr7_A mol:protein length:110 Neural globin
PfamA27U 2-88 -36.800 34  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 2-110 -43.200 16  d2gdma_ a.1.1.2 (A:) Leghemoglobin {Yellow lupin (Lupinus luteus) [TaxId: 3873]}
VFDB 5-110 -4.920 VFG1935 (gi:15792243) ciaB - CiaB protein [Campylobacter jejuni NCTC 11168] (VF0324)
7 d3sdha_ a.1.1.2 (A:) Hemoglobin I {Ark clam (Scapharca inaequivalvis) [TaxId: 6561]} 145 COG0614 8-145 -39.400 17  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 9-145 -56.300 15  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 10-62 -5.970 PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 36-145 -7.340 13  sp|P21359|NF1_HUMAN Neurofibromin OS=Homo sapiens GN=NF1 PE=1 SV=2 (Range: 491-632)
PDB0614 1-145 -67.000 98  3uhd_A mol:protein length:146 Globin-1
PfamA27U 5-145 -12.600 10  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
13-118 -40.500 17  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 8-145 -58.900 22  d1mbaa_ a.1.1.2 (A:) Myoglobin {Slug sea hare (Aplysia limacina) [TaxId: 6502]}
VFDB 38-144 -5.260 VFG1220 (gi:15600235) pilO - type 4 fimbrial biogenesis protein PilO [Pseudomonas aeruginosa PAO1] (VF0082)
8 d1b0ba_ a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) [TaxId: 29163]} 142 COG0614 2-140 -38.300 15  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 2-141 -54.700 17  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 3-45 -4.780 PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 6-140 -8.250 sp|Q8IX21|F178A_HUMAN Protein FAM178A OS=Homo sapiens GN=FAM178A PE=1 SV=2 (Range: 727-883)
PDB0614 1-142 -66.500 100  1b0b_A mol:protein length:142 HEMOGLOBIN
PfamA27U 1-142 -12.900 12  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
6-114 -40.700 28  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 1-141 -58.400 27  d1mbaa_ a.1.1.2 (A:) Myoglobin {Slug sea hare (Aplysia limacina) [TaxId: 6502]}
VFDB 79-142 -5.690 VFG0498 (gi:16764747) sseA - Secretion system effector [Salmonella enterica (serovar typhimurium) LT2] (VF0321)
9 d1h97a_ a.1.1.2 (A:) Trematode hemoglobin/myoglobin {Paramphistomum epiclitum [TaxId: 54403]} 147 COG0614 2-147 -29.800 13  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 2-147 -50.400 12  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 3-66 -6.010 12  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 43-147 -7.540 tr|F5H085|F5H085_HUMAN Uncharacterized protein OS=Homo sapiens GN=CABIN1 PE=4 SV=1 (Range: 1-89)
PDB0614 1-147 -66.600 100  1h97_A mol:protein length:147 GLOBIN-3
PfamA27U 1-143 -9.540 PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
6-116 -43.000 13  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 1-147 -56.500 17  d1mbaa_ a.1.1.2 (A:) Myoglobin {Slug sea hare (Aplysia limacina) [TaxId: 6502]}
VFDB 3-147 -5.840 VFG1333 (gi:22538178) cfb - CAMP factor [Streptococcus agalactiae 2603V/R] (VF0280)
10 d1jl7a_ a.1.1.2 (A:) Glycera globin {Marine bloodworm (Glycera dibranchiata) [TaxId: 6350]} 147 COG0614 2-147 -58.800 18  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 2-147 -60.100 20  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 2-143 -4.550 PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]
NEW_HUMAN_DOMAINS 3-85 -6.480 sp|Q16206|ENOX2_HUMAN Ecto-NOX disulfide-thiol exchanger 2 OS=Homo sapiens GN=ENOX2 PE=1 SV=2 (Range: 246-379)
PDB0614 1-147 -79.300 100  1jf3_A mol:protein length:147 monomer hemoglobin component III
PfamA27U 1-147 -11.500 12  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
6-111 -27.900 18  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 2-147 -62.900 22  d1cqxa1 a.1.1.2 (A:1-150) Flavohemoglobin, N-terminal domain {Alcaligenes eutrophus [TaxId: 106590]}
VFDB 5-138 -5.350 VFG2331 (gi:123442767) fliI - flagellum-specific ATP synthase [Yersinia enterocolitica 8081] (VF0394)
11 d1a6ma_ a.1.1.2 (A:) Myoglobin {Sperm whale (Physeter catodon) [TaxId: 9755]} 151 COG0614 1-151 -39.400 12  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 1-151 -75.700 84  sp|P02144|MYG_HUMAN Myoglobin OS=Homo sapiens GN=MB PE=1 SV=2
HGM_OVER 3-58 -4.910 14  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 3-149 -6.780 10  sp|Q5TH69|BIG3_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo sapiens GN=ARFGEF3 PE=1 SV=3 (Range: 1440-1626)
PDB0614 1-151 -77.000 98  4fwx_A mol:protein length:153 Myoglobin
PfamA27U 2-148 -13.200 10  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
6-112 -36.000 21  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 2-151 -70.800 32  d1urva_ a.1.1.2 (A:) Cytoglobin {Human (Homo sapiens) [TaxId: 9606]}
VFDB 16-145 -5.990 10  VFG2055 (gi:82778259) gspL - putative general secretion pathway for protein export [Shigella dysenteriae Sd197] (VF0333)
12 d1mbaa_ a.1.1.2 (A:) Myoglobin {Slug sea hare (Aplysia limacina) [TaxId: 6502]} 146 COG0614 2-146 -39.700 15  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 2-146 -56.900 20  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 3-63 -4.890 23  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 40-94 -6.670 tr|F5H085|F5H085_HUMAN Uncharacterized protein OS=Homo sapiens GN=CABIN1 PE=4 SV=1 (Range: 1-89)
PDB0614 1-146 -68.400 100  1mba_A mol:protein length:147 MYOGLOBIN
PfamA27U 1-145 -14.300 13  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
6-113 -43.900 29  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 1-146 -59.200 18  d1hlba_ a.1.1.2 (A:) Hemoglobin, different isoforms {Caudina arenicola, also known as Molpadia arenicola [TaxId: 7698]}
VFDB 10-143 -5.110 VFG0985 (gi:18462578) ipaD - IpaD, secreted by the Mxi-Spa machinery, required for entry of bacteria into epithelial cells [Shigella flexneri (serotype 2a) 301] (VF0118)
13 d1ecda_ a.1.1.2 (A:) Erythrocruorin {Midge (Chironomus thummi thummi), fraction III [TaxId: 7154]} 136 COG0614 1-134 -34.500 16  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 1-135 -51.800 14  sp|P69892|HBG2_HUMAN Hemoglobin subunit gamma-2 OS=Homo sapiens GN=HBG2 PE=1 SV=2
HGM_OVER 8-72 -4.220 PB014998 gi|86133284|ref|ZP_01051866.1| hypothetical protein MED152_01230 [Tenacibaculum sp. MED152]gi|85820147|gb|EAQ41294.1| hypothetical protein MED152_01230 [Polaribacter dokdonensis MED152]
NEW_HUMAN_DOMAINS 27-136 -7.570 sp|Q8TAG9|EXOC6_HUMAN Exocyst complex component 6 OS=Homo sapiens GN=EXOC6 PE=1 SV=3 (Range: 280-409)
PDB0614 1-136 -66.900 100  1eca_A mol:protein length:136 ERYTHROCRUORIN (AQUO MET)
PfamA27U 1-135 -11.800 10  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
5-105 -46.800 50  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 1-135 -54.900 24  d1mbaa_ a.1.1.2 (A:) Myoglobin {Slug sea hare (Aplysia limacina) [TaxId: 6502]}
VFDB 5-134 -4.370 10  VFG1878 (gi:52842095) lspL - general secretion pathway protein L [Legionella pneumophila Philadelphia 1] (VF0154)
14 d2gdma_ a.1.1.2 (A:) Leghemoglobin {Yellow lupin (Lupinus luteus) [TaxId: 3873]} 153 COG0614 2-151 -55.400 20  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 3-152 -63.400 20  sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1
HGM_OVER 23-140 -3.510 12  PB017124 _Gut.Meta.Jp.0039711_ gi|162659581|dbj|BAAX01000024.1||2 (+ 385:1498~0 complete)
NEW_HUMAN_DOMAINS 5-152 -9.120 sp|Q9Y6D5|BIG2_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Homo sapiens GN=ARFGEF2 PE=1 SV=3 (Range: 1250-1487)
PDB0614 1-153 -80.700 100  1gdi_A mol:protein length:153 LEGHEMOGLOBIN (CARBONMONOXY)
PfamA27U 2-153 -15.400 10  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
7-115 -35.600 19  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 2-151 -62.500 19  d1jl7a_ a.1.1.2 (A:) Glycera globin {Marine bloodworm (Glycera dibranchiata) [TaxId: 6350]}
VFDB 3-139 -7.380 10  VFG1610 (gi:23954292) orf76 - hypothetical protein [Escherichia coli 536]
15 d1cg5a_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Cartilaginous fish akaei (Dasyatis akajei) [TaxId: 31902]} 141 COG0614 1-139 -39.100 17  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 1-141 -66.500 40  sp|Q6B0K9|HBM_HUMAN Hemoglobin subunit mu OS=Homo sapiens GN=HBM PE=2 SV=1
HGM_OVER 16-127 -5.470 14  PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;
NEW_HUMAN_DOMAINS 20-141 -6.630 10  sp|Q9NSG2|CA112_HUMAN Uncharacterized protein C1orf112 OS=Homo sapiens GN=C1orf112 PE=1 SV=1 (Range: 1-565)
PDB0614 1-141 -73.400 100  1cg5_A mol:protein length:141 PROTEIN (HEMOGLOBIN)
PfamA27U 2-140 -12.100 14  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
6-107 -35.000 19  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 2-141 -69.200 38  d3d1ka1 a.1.1.2 (A:1-142) Hemoglobin, alpha-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]}
VFDB 26-134 -4.900 VFG0441 (gi:17233493) spvR - Salmonella plasmid virulence: regulation of spv operon, lysR family [Salmonella enterica (serovar typhimurium) LT2] (VF0107)
16 d3d1ka1 a.1.1.2 (A:1-142) Hemoglobin, alpha-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]} 142 COG0614 2-140 -42.400 15  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 1-142 -69.100 46  sp|P02008|HBAZ_HUMAN Hemoglobin subunit zeta OS=Homo sapiens GN=HBZ PE=1 SV=2
HGM_OVER 3-77 -4.890 13  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 3-139 -7.580 10  sp|Q5TH69|BIG3_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo sapiens GN=ARFGEF3 PE=1 SV=3 (Range: 1440-1626)
PDB0614 1-142 -73.400 100  1la6_A mol:protein length:143 Hemoglobin alpha-1 chain
PfamA27U 1-141 -12.700 17  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
6-107 -34.900 15  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 2-142 -69.200 38  d1cg5a_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Cartilaginous fish akaei (Dasyatis akajei) [TaxId: 31902]}
VFDB 7-142 -5.080 VFG1479 (gi:24528011) ORF28 - hypothetical protein [Escherichia coli 536]
17 d1cg5b_ a.1.1.2 (B:) Hemoglobin, beta-chain {Cartilaginous fish akaei (Dasyatis akajei) [TaxId: 31902]} 141 COG0614 3-139 -42.000 14  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 1-141 -68.000 38  sp|P69892|HBG2_HUMAN Hemoglobin subunit gamma-2 OS=Homo sapiens GN=HBG2 PE=1 SV=2
HGM_OVER 4-77 -5.030 15  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 16-140 -6.680 12  sp|Q9NSG2|CA112_HUMAN Uncharacterized protein C1orf112 OS=Homo sapiens GN=C1orf112 PE=1 SV=1 (Range: 1-565)
PDB0614 1-141 -76.700 100  1cg5_B mol:protein length:141 PROTEIN (HEMOGLOBIN)
PfamA27U 1-140 -13.900 11  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
7-106 -36.700 18  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 1-141 -67.200 31  d3d1kb1 a.1.1.2 (B:1-146) Hemoglobin, beta-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]}
VFDB 1-120 -4.930 VFG0272 (gi:15644700) ureE - urease accessory protein (ureE) [Helicobacter pylori 26695] (VF0050)
18 d3d1kb1 a.1.1.2 (B:1-146) Hemoglobin, beta-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]} 146 COG0614 1-72 -27.400 16  [C] KOG3378 Globins and related hemoproteins
3-143 -26.700 11  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 1-146 -75.700 43  sp|P68871|HBB_HUMAN Hemoglobin subunit beta OS=Homo sapiens GN=HBB PE=1 SV=2
HGM_OVER 4-57 -5.050 13  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 18-146 -6.170 10  sp|Q9NSG2|CA112_HUMAN Uncharacterized protein C1orf112 OS=Homo sapiens GN=C1orf112 PE=1 SV=1 (Range: 1-565)
PDB0614 1-146 -76.900 100  1la6_B mol:protein length:146 Hemoglobin beta-1/2 chain
PfamA27U 1-145 -9.990 12  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
7-111 -38.200 12  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 3-146 -68.100 21  d1a6ma_ a.1.1.2 (A:) Myoglobin {Sperm whale (Physeter catodon) [TaxId: 9755]}
VFDB 13-120 -5.350 VFG0441 (gi:17233493) spvR - Salmonella plasmid virulence: regulation of spv operon, lysR family [Salmonella enterica (serovar typhimurium) LT2] (VF0107)
19 d1gcvb_ a.1.1.2 (B:) Hemoglobin, beta-chain {Houndshark (Mustelus griseus) [TaxId: 89020]} 136 COG0614 3-134 -38.100 12  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 1-136 -67.100 35  sp|P68871|HBB_HUMAN Hemoglobin subunit beta OS=Homo sapiens GN=HBB PE=1 SV=2
HGM_OVER 4-71 -4.890 15  PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 16-136 -5.990 sp|Q9NSG2|CA112_HUMAN Uncharacterized protein C1orf112 OS=Homo sapiens GN=C1orf112 PE=1 SV=1 (Range: 1-565)
PDB0614 1-136 -71.600 100  1gcv_B mol:protein length:136 HEMOGLOBIN
PfamA27U 1-135 -10.800 14  PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
7-101 -31.100 15  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 1-136 -66.800 40  d3d1kb1 a.1.1.2 (B:1-146) Hemoglobin, beta-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]}
VFDB 42-134 -5.170 VFG0195 (gi:15596897) pcr2 - conserved hypothetical protein in type III secretion [Pseudomonas aeruginosa PAO1] (VF0083)
20 d1it2a_ a.1.1.2 (A:) Hagfish hemoglobin {Inshore hagfish (Eptatretus burgeri) [TaxId: 7764]} 146 COG0614 11-146 -35.100 13  [C] COG1017 Hemoglobin-like flavoprotein
H.sapiens 1-146 -57.800 22  sp|Q8WWM9|CYGB_HUMAN Cytoglobin OS=Homo sapiens GN=CYGB PE=1 SV=1
HGM_OVER 1-65 -5.290 PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]
NEW_HUMAN_DOMAINS 12-82 -5.720 14  sp|Q5EBM0|CMPK2_HUMAN UMP-CMP kinase 2, mitochondrial OS=Homo sapiens GN=CMPK2 PE=1 SV=3 (Range: 142-243)
PDB0614 1-146 -75.400 100  1it2_A mol:protein length:146 hemoglobin
PfamA27U 7-146 -12.400 PF11563.3; F0XJU9_GROCL/20-199; Protoglobin
15-122 -39.800 20  PF00042.17; GLB8_CHITH/9-115; Globin
SCOP175 10-146 -59.000 23  d1urva_ a.1.1.2 (A:) Cytoglobin {Human (Homo sapiens) [TaxId: 9606]}
VFDB 12-121 -4.910 14  VFG0478 (gi:16764063) fur - transcriptional repressor of iron-responsive genes (Fur family) (ferric uptake regulator) [Salmonella enterica (serovar typhimurium) LT2] (VF0113)


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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.