FFAS03 list of results PfamA26U / PfamA26U

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 13463 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 PF00001.16; HRH2_CANFA/35-288; 7 transmembrane receptor (rhodopsin family) 254 PfamA26U 1-254 -57.500 12 PF10323.4; Q86DM2_CAEEL/15-294; Serpentine type 7TM GPCR chemoreceptor Srv
2 PF00002.19; GLP1R_RAT/141-398; 7 transmembrane receptor (Secretin family) 258 PfamA26U 1-258 -71.600 12 PF05462.6; CAR4_DICDI/1-309; Slime mold cyclic AMP receptor
3 PF00003.17; Q80Z09_MOUSE/601-839; 7 transmembrane sweet-taste receptor of 3 GCPR 239 PfamA26U 49-237 -8.880 11 PF05297.6; Q89558_EBVG/1-381; Herpesvirus latent membrane protein 1 (LMP1)
4 PF00004.24; LON_BRECH/351-493; ATPase family associated with various cellular activities (AAA) 143 PfamA26U 1-122 -15.900 12 PF00910.17; A7M6L1_9SECO/473-576; RNA helicase
5 PF00005.22; YTFR_ECOLI/49-174; ABC transporter 126 PfamA26U 1-126 -15.300 21 PF09818.4; Q2C6W1_9GAMM/1-438; Predicted ATPase of the ABC class
6 PF00006.20; A0YD60_9GAMM/56-264; ATP synthase alpha/beta family, nucleotide-binding domain 209 PfamA26U 6-197 -9.540 12 PF07088.6; GVPD1_HALSA/23-536; GvpD gas vesicle protein
12-169 -11.900 12 PF13481.1; Q7U700_SYNPX/79-275; AAA domain
7 PF00007.17; GTHB2_FUNHE/24-128; Cystine-knot domain 105 PfamA26U 2-94 -21.600 14 PF05463.6; SOSD1_MOUSE/6-206; Sclerostin (SOST)
8 PF00008.22; LTBP1_RAT/1462-1496; EGF-like domain 35 PfamA26U 8-27 -11.300 45 PF07645.10; Q8WPL1_OIKDI/1687-1732; Calcium-binding EGF domain
9 PF00009.22; EFG_CHLPN/9-286; Elongation factor Tu GTP binding domain 278 PfamA26U 3-174 -13.900 17 PF10662.4; A5ZM04_9FIRM/1-141; Ethanolamine utilisation - propanediol utilisation
10 PF00010.21; BHA15_RAT/73-125; Helix-loop-helix DNA-binding domain 53 PfamA26U 1-53 -5.340 13 PF08589.5; Q0CA90_ASPTN/9-99; Fungal protein of unknown function (DUF1770 topsan)
11 PF00011.16; HSP23_DROME/63-161; Hsp20/alpha crystallin family 99 PfamA26U 1-93 -19.100 14 PF05455.6; O33403_NATVU/1-181; GvpH
12 PF00012.15; HSP77_YEAST/32-633; Hsp70 protein 602 PfamA26U 2-368 -22.400 23 PF06723.8; Q92GC5_RICCN/10-340; MreB/Mbl protein
13 PF00013.24; Q9LQ22_ARATH/211-276; KH domain 66 PfamA26U 10-54 -21.900 31 PF13014.1; B9HEA8_POPTR/415-462; KH domain
14 PF00014.18; O17644_CAEEL/982-1034; Kunitz/Bovine pancreatic trypsin inhibitor domain 53 PfamA26U 30-48 -6.050 26 PF06358.6; Q6B4J7_9VIRU/1-111; Protein of unknown function (DUF1065 topsan)
15 PF00015.16; MCPC_SALTY/323-517; Methyl-accepting chemotaxis protein (MCP) signalling domain 195 PfamA26U 1-175 -63.800 18 PF03532.8; O50963_BORBU/3-255; OMS28 porin
16 PF00016.15; RBL1A_CHRVI/146-454; Ribulose bisphosphate carboxylase large chain, catalytic domain 309 PfamA26U 20-303 -8.770 17 PF01207.12; DUSB_ECOLI/13-321; Dihydrouridine synthase (Dus)
17 PF00017.19; P85B_BOVIN/326-401; SH2 domain 76 PfamA26U 1-74 -7.520 11 PF07528.9; ILF2_DROME/105-345; DZF domain
18 PF00018.23; YKA7_CAEEL/197-244; SH3 domain 48 PfamA26U 2-48 -24.900 17 PF07653.12; Q91VM1_MOUSE/239-294; Variant SH3 domain
19 PF00019.15; DVR1_DANRE/251-355; Transforming growth factor beta like domain 105 PfamA26U 1-105 -14.600 15 PF03045.10; GREM1_MOUSE/67-184; DAN domain
20 PF00020.13; TNR4_RAT/62-102; TNFR/NGFR cysteine-rich region 41 PfamA26U 3-41 -6.160 12 PF04186.8; Q4JVQ6_CORJK/2-119; FxsA cytoplasmic membrane protein

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

Comments and questions to: webmaster

#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`PF00001.16; HRH2_CANFA/35-288; 7 transmembrane receptor (rhodopsin family)`	`254`	`PfamA26U`	`1-254`	`-57.500`	`12`	`PF10323.4; Q86DM2_CAEEL/15-294; Serpentine type 7TM GPCR chemoreceptor Srv`
2	`PF00002.19; GLP1R_RAT/141-398; 7 transmembrane receptor (Secretin family)`	`258`	`PfamA26U`	`1-258`	`-71.600`	`12`	`PF05462.6; CAR4_DICDI/1-309; Slime mold cyclic AMP receptor`
3	`PF00003.17; Q80Z09_MOUSE/601-839; 7 transmembrane sweet-taste receptor of 3 GCPR`	`239`	`PfamA26U`	`49-237`	`-8.880`	`11`	`PF05297.6; Q89558_EBVG/1-381; Herpesvirus latent membrane protein 1 (LMP1)`
4	`PF00004.24; LON_BRECH/351-493; ATPase family associated with various cellular activities (AAA)`	`143`	`PfamA26U`	`1-122`	`-15.900`	`12`	`PF00910.17; A7M6L1_9SECO/473-576; RNA helicase`
5	`PF00005.22; YTFR_ECOLI/49-174; ABC transporter`	`126`	`PfamA26U`	`1-126`	`-15.300`	`21`	`PF09818.4; Q2C6W1_9GAMM/1-438; Predicted ATPase of the ABC class`
6	`PF00006.20; A0YD60_9GAMM/56-264; ATP synthase alpha/beta family, nucleotide-binding domain`	`209`	`PfamA26U`	`6-197`	`-9.540`	`12`	`PF07088.6; GVPD1_HALSA/23-536; GvpD gas vesicle protein`
				`12-169`	`-11.900`	`12`	`PF13481.1; Q7U700_SYNPX/79-275; AAA domain`
7	`PF00007.17; GTHB2_FUNHE/24-128; Cystine-knot domain`	`105`	`PfamA26U`	`2-94`	`-21.600`	`14`	`PF05463.6; SOSD1_MOUSE/6-206; Sclerostin (SOST)`
8	`PF00008.22; LTBP1_RAT/1462-1496; EGF-like domain`	`35`	`PfamA26U`	`8-27`	`-11.300`	`45`	`PF07645.10; Q8WPL1_OIKDI/1687-1732; Calcium-binding EGF domain`
9	`PF00009.22; EFG_CHLPN/9-286; Elongation factor Tu GTP binding domain`	`278`	`PfamA26U`	`3-174`	`-13.900`	`17`	`PF10662.4; A5ZM04_9FIRM/1-141; Ethanolamine utilisation - propanediol utilisation`
10	`PF00010.21; BHA15_RAT/73-125; Helix-loop-helix DNA-binding domain`	`53`	`PfamA26U`	`1-53`	`-5.340`	`13`	`PF08589.5; Q0CA90_ASPTN/9-99; Fungal protein of unknown function (DUF1770 topsan)`
11	`PF00011.16; HSP23_DROME/63-161; Hsp20/alpha crystallin family`	`99`	`PfamA26U`	`1-93`	`-19.100`	`14`	`PF05455.6; O33403_NATVU/1-181; GvpH`
12	`PF00012.15; HSP77_YEAST/32-633; Hsp70 protein`	`602`	`PfamA26U`	`2-368`	`-22.400`	`23`	`PF06723.8; Q92GC5_RICCN/10-340; MreB/Mbl protein`
13	`PF00013.24; Q9LQ22_ARATH/211-276; KH domain`	`66`	`PfamA26U`	`10-54`	`-21.900`	`31`	`PF13014.1; B9HEA8_POPTR/415-462; KH domain`
14	`PF00014.18; O17644_CAEEL/982-1034; Kunitz/Bovine pancreatic trypsin inhibitor domain`	`53`	`PfamA26U`	`30-48`	`-6.050`	`26`	`PF06358.6; Q6B4J7_9VIRU/1-111; Protein of unknown function (DUF1065 topsan)`
15	`PF00015.16; MCPC_SALTY/323-517; Methyl-accepting chemotaxis protein (MCP) signalling domain`	`195`	`PfamA26U`	`1-175`	`-63.800`	`18`	`PF03532.8; O50963_BORBU/3-255; OMS28 porin`
16	`PF00016.15; RBL1A_CHRVI/146-454; Ribulose bisphosphate carboxylase large chain, catalytic domain`	`309`	`PfamA26U`	`20-303`	`-8.770`	`17`	`PF01207.12; DUSB_ECOLI/13-321; Dihydrouridine synthase (Dus)`
17	`PF00017.19; P85B_BOVIN/326-401; SH2 domain`	`76`	`PfamA26U`	`1-74`	`-7.520`	`11`	`PF07528.9; ILF2_DROME/105-345; DZF domain`
18	`PF00018.23; YKA7_CAEEL/197-244; SH3 domain`	`48`	`PfamA26U`	`2-48`	`-24.900`	`17`	`PF07653.12; Q91VM1_MOUSE/239-294; Variant SH3 domain`
19	`PF00019.15; DVR1_DANRE/251-355; Transforming growth factor beta like domain`	`105`	`PfamA26U`	`1-105`	`-14.600`	`15`	`PF03045.10; GREM1_MOUSE/67-184; DAN domain`
20	`PF00020.13; TNR4_RAT/62-102; TNFR/NGFR cysteine-rich region`	`41`	`PfamA26U`	`3-41`	`-6.160`	`12`	`PF04186.8; Q4JVQ6_CORJK/2-119; FxsA cytoplasmic membrane protein`