FFAS03 list of results M.tuberculosis / PfamA26U

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 4372 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15607143|ref|NP_214515.1| chromosomal replication initiation protein (Rv0001) [Mycobacterium tuberculosis H37Rv] 507 PfamA26U 10-88 -10.600 28 PF11638.3; DNAA_LAWIP/5-67; DnaA N-terminal domain
168-386 -94.600 79 PF00308.13; DNAA_STRCO/317-535; Bacterial dnaA protein
412-480 -33.300 47 PF08299.6; DNAA_PSEPU/414-483; Bacterial dnaA protein helix-turn-helix
2 gi|15607144|ref|NP_214516.1| DNA polymerase III subunit beta (Rv0002) [Mycobacterium tuberculosis H37Rv] 402 PfamA26U 13-130 -49.400 29 PF00712.14; DPO3B_BACSU/1-127; DNA polymerase III beta subunit, N-terminal domain
138-260 -45.600 25 PF02767.11; DPO3B_PROMI/129-244; DNA polymerase III beta subunit, central domain
262-399 -42.900 26 PF02768.10; DPO3B_BACSU/253-376; DNA polymerase III beta subunit, C-terminal domain
3 gi|15607145|ref|NP_214517.1| recombination protein F (Rv0003) [Mycobacterium tuberculosis H37Rv] 385 PfamA26U 1-382 -23.600 12 PF11398.3; Q6D3T4_ERWCT/1-377; Protein of unknown function (DUF2813 topsan)
4 gi|15607146|ref|NP_214518.1| hypothetical protein (Rv0004) [Mycobacterium tuberculosis H37Rv] 187 PfamA26U 75-162 -37.100 25 PF05258.7; Q02A53_SOLUE/3-88; Protein of unknown function (DUF721 topsan)
5 gi|15607147|ref|NP_214519.1| DNA gyrase subunit B (Rv0005) [Mycobacterium tuberculosis H37Rv] 714 PfamA26U 84-183 -9.520 18 PF13589.1; A5G4D8_GEOUR/22-165; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
295-465 -77.700 44 PF00204.20; Q9R3E4_ACISP/115-285; DNA gyrase B
641-703 -41.400 61 PF00986.16; Q6MRR8_BDEBA/731-795; DNA gyrase B subunit, carboxyl terminus
6 gi|15607148|ref|NP_214520.1| DNA gyrase subunit A (Rv0006) [Mycobacterium tuberculosis H37Rv] 838 PfamA26U 39-475 -96.700 31 PF00521.15; A1ZXC5_9BACT/29-447; DNA gyrase/topoisomerase IV, subunit A
621-666 -12.700 50 PF03989.8; GYRA_HAEIN/641-686; DNA gyrase C-terminal domain, beta-propeller
7 gi|15607149|ref|NP_214521.1| hypothetical protein (Rv0007) [Mycobacterium tuberculosis H37Rv] 304 PfamA26U 1-195 -11.000 8 PF05782.6; ECM1_HUMAN/1-540; Extracellular matrix protein 1 (ECM1)
185-303 -47.700 59 PF12089.3; Q0SAF2_RHOSR/350-466; Transmembrane domain of unknown function (DUF3566 topsan)
8 gi|15607150|ref|NP_214522.1| hypothetical protein (Rv0008c) [Mycobacterium tuberculosis H37Rv] 145 PfamA26U 9-145 -94.000 100 PF10814.3; Y008_MYCTU/9-145; Protein of unknown function (DUF2562 topsan)
9 gi|15607151|ref|NP_214523.1| iron-regulated peptidyl-prolyl cis-trans isomerase A (Rv0009) [Mycobacterium tuberculosis H37Rv] 182 PfamA26U 16-180 -57.100 34 PF00160.16; Q21K05_SACD2/30-188; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
10 gi|15607152|ref|NP_214524.1| hypothetical protein (Rv0010c) [Mycobacterium tuberculosis H37Rv] 141 PfamA26U 58-136 -24.200 18 PF10756.4; Q5YRV9_NOCFA/80-151; Protein of unknown function (DUF2581 topsan)
11 gi|15607153|ref|NP_214525.1| putative septation inhibitor protein (Rv0011c) [Mycobacterium tuberculosis H37Rv] 93 PfamA26U 1-93 -61.000 32 PF06781.7; A7BB21_9ACTO/1-87; Uncharacterised protein family (UPF0233 topsan)
12 gi|15607154|ref|NP_214526.1| hypothetical protein (Rv0012) [Mycobacterium tuberculosis H37Rv] 262 PfamA26U 100-257 -63.100 29 PF05949.7; Q2RGA3_MOOTA/82-238; Bacterial protein of unknown function (DUF881 topsan)
13 gi|57116682|ref|YP_177615.1| para-aminobenzoate synthase component II (Rv0013) [Mycobacterium tuberculosis H37Rv] 232 PfamA26U 4-189 -38.100 22 PF00117.23; GUAA_SYNY3/30-212; Glutamine amidotransferase class-I
14 gi|15607156|ref|NP_214528.1| transmembrane serine/threonine-protein kinase B PKNB (protein kinase B) (STPK B) (Rv0014c) [Mycobacterium tuberculosis H37Rv] 626 PfamA26U 11-270 -49.700 22 PF00069.20; KS6A1_MOUSE/407-664; Protein kinase domain
495-557 -14.600 23 PF03793.14; Q72S33_LEPIC/112-183; PASTA domain
15 gi|15607157|ref|NP_214529.1| transmembrane serine/threonine-protein kinase A PKNA (protein kinase A) (STPK A) (Rv0015c) [Mycobacterium tuberculosis H37Rv] 431 PfamA26U 13-267 -47.700 24 PF00069.20; KS6A1_MOUSE/407-664; Protein kinase domain
371-430 -12.500 15 PF03793.14; Q72S33_LEPIC/112-183; PASTA domain
16 gi|15607158|ref|NP_214530.1|(removed signalp:1-30) penicillin-binding protein PbpA (Rv0016c) [Mycobacterium tuberculosis H37Rv] 461 PfamA26U 33-93 -14.600 24 PF03717.10; Q8CXI6_OCEIH/55-207; Penicillin-binding Protein dimerisation domain
130-454 -73.600 21 PF00905.17; YQGF_BACSU/352-682; Penicillin binding protein transpeptidase domain
17 gi|15607159|ref|NP_214531.1|(removed signalp:1-35) cell division protein RodA (Rv0017c) [Mycobacterium tuberculosis H37Rv] 434 PfamA26U 45-410 -107.000 31 PF01098.14; SP5E_BACSU/10-366; Cell cycle protein
18 gi|15607160|ref|NP_214532.1| serine/threonine phosphatase (Rv0018c) [Mycobacterium tuberculosis H37Rv] 514 PfamA26U 17-235 -33.200 17 PF13672.1; C0DBA3_9CLOT/45-272; Protein phosphatase 2C
324-417 -12.000 18 PF08955.5; Q2B6F1_9BACI/93-167; BofC C-terminal domain
416-503 -9.770 20 PF12526.3; Q8JJN7_HEV/686-799; Protein of unknown function (DUF3729 topsan)
19 gi|15607161|ref|NP_214533.1| hypothetical protein (Rv0019c) [Mycobacterium tuberculosis H37Rv] 155 PfamA26U 84-147 -36.700 26 PF00498.21; Q8YS22_NOSS1/91-156; FHA domain
20 gi|15607162|ref|NP_214534.1| hypothetical protein (Rv0020c) [Mycobacterium tuberculosis H37Rv] 527 PfamA26U 5-316 -9.800 12 PF07271.6; P32_MYCGA/1-289; Cytadhesin P30/P32
8-123 -36.600 77 PF12401.3; Q744Q9_MYCPA/8-123; Protein of unknown function (DUF2662 topsan)
455-518 -22.300 42 PF00498.21; Q8YS22_NOSS1/91-156; FHA domain

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|15607143\|ref\|NP_214515.1\| chromosomal replication initiation protein (Rv0001) [Mycobacterium tuberculosis H37Rv]`	`507`	`PfamA26U`	`10-88`	`-10.600`	`28`	`PF11638.3; DNAA_LAWIP/5-67; DnaA N-terminal domain`
				`168-386`	`-94.600`	`79`	`PF00308.13; DNAA_STRCO/317-535; Bacterial dnaA protein`
				`412-480`	`-33.300`	`47`	`PF08299.6; DNAA_PSEPU/414-483; Bacterial dnaA protein helix-turn-helix`
2	`gi\|15607144\|ref\|NP_214516.1\| DNA polymerase III subunit beta (Rv0002) [Mycobacterium tuberculosis H37Rv]`	`402`	`PfamA26U`	`13-130`	`-49.400`	`29`	`PF00712.14; DPO3B_BACSU/1-127; DNA polymerase III beta subunit, N-terminal domain`
				`138-260`	`-45.600`	`25`	`PF02767.11; DPO3B_PROMI/129-244; DNA polymerase III beta subunit, central domain`
				`262-399`	`-42.900`	`26`	`PF02768.10; DPO3B_BACSU/253-376; DNA polymerase III beta subunit, C-terminal domain`
3	`gi\|15607145\|ref\|NP_214517.1\| recombination protein F (Rv0003) [Mycobacterium tuberculosis H37Rv]`	`385`	`PfamA26U`	`1-382`	`-23.600`	`12`	`PF11398.3; Q6D3T4_ERWCT/1-377; Protein of unknown function (DUF2813 topsan)`
4	`gi\|15607146\|ref\|NP_214518.1\| hypothetical protein (Rv0004) [Mycobacterium tuberculosis H37Rv]`	`187`	`PfamA26U`	`75-162`	`-37.100`	`25`	`PF05258.7; Q02A53_SOLUE/3-88; Protein of unknown function (DUF721 topsan)`
5	`gi\|15607147\|ref\|NP_214519.1\| DNA gyrase subunit B (Rv0005) [Mycobacterium tuberculosis H37Rv]`	`714`	`PfamA26U`	`84-183`	`-9.520`	`18`	`PF13589.1; A5G4D8_GEOUR/22-165; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase`
				`295-465`	`-77.700`	`44`	`PF00204.20; Q9R3E4_ACISP/115-285; DNA gyrase B`
				`641-703`	`-41.400`	`61`	`PF00986.16; Q6MRR8_BDEBA/731-795; DNA gyrase B subunit, carboxyl terminus`
6	`gi\|15607148\|ref\|NP_214520.1\| DNA gyrase subunit A (Rv0006) [Mycobacterium tuberculosis H37Rv]`	`838`	`PfamA26U`	`39-475`	`-96.700`	`31`	`PF00521.15; A1ZXC5_9BACT/29-447; DNA gyrase/topoisomerase IV, subunit A`
				`621-666`	`-12.700`	`50`	`PF03989.8; GYRA_HAEIN/641-686; DNA gyrase C-terminal domain, beta-propeller`
7	`gi\|15607149\|ref\|NP_214521.1\| hypothetical protein (Rv0007) [Mycobacterium tuberculosis H37Rv]`	`304`	`PfamA26U`	`1-195`	`-11.000`	`8`	`PF05782.6; ECM1_HUMAN/1-540; Extracellular matrix protein 1 (ECM1)`
				`185-303`	`-47.700`	`59`	`PF12089.3; Q0SAF2_RHOSR/350-466; Transmembrane domain of unknown function (DUF3566 topsan)`
8	`gi\|15607150\|ref\|NP_214522.1\| hypothetical protein (Rv0008c) [Mycobacterium tuberculosis H37Rv]`	`145`	`PfamA26U`	`9-145`	`-94.000`	`100`	`PF10814.3; Y008_MYCTU/9-145; Protein of unknown function (DUF2562 topsan)`
9	`gi\|15607151\|ref\|NP_214523.1\| iron-regulated peptidyl-prolyl cis-trans isomerase A (Rv0009) [Mycobacterium tuberculosis H37Rv]`	`182`	`PfamA26U`	`16-180`	`-57.100`	`34`	`PF00160.16; Q21K05_SACD2/30-188; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD`
10	`gi\|15607152\|ref\|NP_214524.1\| hypothetical protein (Rv0010c) [Mycobacterium tuberculosis H37Rv]`	`141`	`PfamA26U`	`58-136`	`-24.200`	`18`	`PF10756.4; Q5YRV9_NOCFA/80-151; Protein of unknown function (DUF2581 topsan)`
11	`gi\|15607153\|ref\|NP_214525.1\| putative septation inhibitor protein (Rv0011c) [Mycobacterium tuberculosis H37Rv]`	`93`	`PfamA26U`	`1-93`	`-61.000`	`32`	`PF06781.7; A7BB21_9ACTO/1-87; Uncharacterised protein family (UPF0233 topsan)`
12	`gi\|15607154\|ref\|NP_214526.1\| hypothetical protein (Rv0012) [Mycobacterium tuberculosis H37Rv]`	`262`	`PfamA26U`	`100-257`	`-63.100`	`29`	`PF05949.7; Q2RGA3_MOOTA/82-238; Bacterial protein of unknown function (DUF881 topsan)`
13	`gi\|57116682\|ref\|YP_177615.1\| para-aminobenzoate synthase component II (Rv0013) [Mycobacterium tuberculosis H37Rv]`	`232`	`PfamA26U`	`4-189`	`-38.100`	`22`	`PF00117.23; GUAA_SYNY3/30-212; Glutamine amidotransferase class-I`
14	`gi\|15607156\|ref\|NP_214528.1\| transmembrane serine/threonine-protein kinase B PKNB (protein kinase B) (STPK B) (Rv0014c) [Mycobacterium tuberculosis H37Rv]`	`626`	`PfamA26U`	`11-270`	`-49.700`	`22`	`PF00069.20; KS6A1_MOUSE/407-664; Protein kinase domain`
				`495-557`	`-14.600`	`23`	`PF03793.14; Q72S33_LEPIC/112-183; PASTA domain`
15	`gi\|15607157\|ref\|NP_214529.1\| transmembrane serine/threonine-protein kinase A PKNA (protein kinase A) (STPK A) (Rv0015c) [Mycobacterium tuberculosis H37Rv]`	`431`	`PfamA26U`	`13-267`	`-47.700`	`24`	`PF00069.20; KS6A1_MOUSE/407-664; Protein kinase domain`
				`371-430`	`-12.500`	`15`	`PF03793.14; Q72S33_LEPIC/112-183; PASTA domain`
16	`gi\|15607158\|ref\|NP_214530.1\|(removed signalp:1-30) penicillin-binding protein PbpA (Rv0016c) [Mycobacterium tuberculosis H37Rv]`	`461`	`PfamA26U`	`33-93`	`-14.600`	`24`	`PF03717.10; Q8CXI6_OCEIH/55-207; Penicillin-binding Protein dimerisation domain`
				`130-454`	`-73.600`	`21`	`PF00905.17; YQGF_BACSU/352-682; Penicillin binding protein transpeptidase domain`
17	`gi\|15607159\|ref\|NP_214531.1\|(removed signalp:1-35) cell division protein RodA (Rv0017c) [Mycobacterium tuberculosis H37Rv]`	`434`	`PfamA26U`	`45-410`	`-107.000`	`31`	`PF01098.14; SP5E_BACSU/10-366; Cell cycle protein`
18	`gi\|15607160\|ref\|NP_214532.1\| serine/threonine phosphatase (Rv0018c) [Mycobacterium tuberculosis H37Rv]`	`514`	`PfamA26U`	`17-235`	`-33.200`	`17`	`PF13672.1; C0DBA3_9CLOT/45-272; Protein phosphatase 2C`
				`324-417`	`-12.000`	`18`	`PF08955.5; Q2B6F1_9BACI/93-167; BofC C-terminal domain`
				`416-503`	`-9.770`	`20`	`PF12526.3; Q8JJN7_HEV/686-799; Protein of unknown function (DUF3729 topsan)`
19	`gi\|15607161\|ref\|NP_214533.1\| hypothetical protein (Rv0019c) [Mycobacterium tuberculosis H37Rv]`	`155`	`PfamA26U`	`84-147`	`-36.700`	`26`	`PF00498.21; Q8YS22_NOSS1/91-156; FHA domain`
20	`gi\|15607162\|ref\|NP_214534.1\| hypothetical protein (Rv0020c) [Mycobacterium tuberculosis H37Rv]`	`527`	`PfamA26U`	`5-316`	`-9.800`	`12`	`PF07271.6; P32_MYCGA/1-289; Cytadhesin P30/P32`
				`8-123`	`-36.600`	`77`	`PF12401.3; Q744Q9_MYCPA/8-123; Protein of unknown function (DUF2662 topsan)`
				`455-518`	`-22.300`	`42`	`PF00498.21; Q8YS22_NOSS1/91-156; FHA domain`