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Results: 1-20 of 3877next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 ACL93468.1 301 COG0614 25-295 -89.400 28  [S] COG1806 Uncharacterized protein conserved in bacteria
H.sapiens 166-301 -9.600 15  sp|Q9Y3D8|KAD6_HUMAN Adenylate kinase isoenzyme 6 OS=Homo sapiens GN=TAF9 PE=1 SV=1
HGM_OVER 135-294 -6.520 12  PB047024 _Gut.Meta.Jp.0098985_ gi|162869273|dbj|BABB01000734.1||6 (+ 5047:5650~0 complete)
NEW_HUMAN_DOMAINS 148-208 -6.340 18  sp|Q9Y6X0|SETBP_HUMAN SET-binding protein OS=Homo sapiens GN=SETBP1 PE=1 SV=3 (Range: 1032-1093)
PDB0614 171-298 -9.760 14  1zp6_A mol:protein length:191 hypothetical protein Atu3015
PfamA27U 32-287 -89.500 28  PF03618.9; PSRP_ACIAD/11-268; Kinase/pyrophosphorylase
SCOP175 171-298 -10.500 14  d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
VFDB 23-295 -5.100 11  VFG0163 (gi:15597594) fpvA - ferripyoverdine receptor [Pseudomonas aeruginosa PAO1] (VF0094)
2 ACL93469.1 199 COG0614 4-197 -100.000 45  [D] COG0424 Nucleotide-binding protein implicated in inhibition of septum formation
H.sapiens 1-199 -65.100 27  sp|O95671|ASML_HUMAN N-acetylserotonin O-methyltransferase-like protein OS=Homo sapiens GN=ASMTL PE=1 SV=3 (Range: 1-300)
HGM_OVER 56-182 -4.090 12  HGC00789 gi|163310627|dbj|BABD01000073.1|7.0 TMP01036;
NEW_HUMAN_DOMAINS 8-105 -4.980 14  sp|O60241|BAI2_HUMAN Brain-specific angiogenesis inhibitor 2 OS=Homo sapiens GN=BAI2 PE=2 SV=2 (Range: 33-128)
PDB0614 1-199 -85.500 29  4jhc_A mol:protein length:215 Maf-like protein YceF
PfamA27U 4-196 -75.900 27  PF02545.9; MAF_BACSU/3-188; Maf-like protein
SCOP175 3-193 -74.200 27  d1ex2a_ c.51.4.2 (A:) Maf protein {Bacillus subtilis [TaxId: 1423]}
VFDB 3-187 -5.570 VFG1336 (gi:22537317) neuD - neuD protein [Streptococcus agalactiae 2603V/R] (VF0274)
3 ACL93470.1 285 COG0614 5-285 -97.700 34  [E] COG0169 Shikimate 5-dehydrogenase
H.sapiens 67-247 -11.100 16  sp|Q9UDR5|AASS_HUMAN Alpha-aminoadipic semialdehyde synthase, mitochondrial OS=Homo sapiens GN=AASS PE=1 SV=1 (Range: 301-600)
100-281 -14.200 17  sp|Q9UDR5|AASS_HUMAN Alpha-aminoadipic semialdehyde synthase, mitochondrial OS=Homo sapiens GN=AASS PE=1 SV=1 (Range: 451-750)
HGM_OVER 49-187 -4.390 PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;
NEW_HUMAN_DOMAINS 68-144 -5.810 tr|A6NMH3|A6NMH3_HUMAN Uncharacterized protein OS=Homo sapiens GN=TNNI3K PE=4 SV=1 (Range: 25-169)
PDB0614 2-285 -96.600 34  3pgj_A mol:protein length:302 Shikimate dehydrogenase
PfamA27U 14-96 -41.200 29  PF08501.6; ARO1_EMENI/1294-1374; Shikimate dehydrogenase substrate binding domain
126-252 -18.300 22  PF01488.15; HEM1_BACHD/171-306; Shikimate / quinate 5-dehydrogenase
SCOP175 10-109 -58.200 36  d1nyta2 c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}
110-281 -61.200 33  d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}
VFDB 131-260 -7.630 17  VFG0361 (gi:16122157) ybtU - yersiniabactin biosynthetic protein YbtU [Yersinia pestis CO92] (VF0136)
4 ACL93471.1 199 COG0614 2-193 -87.000 38  [H] COG0237 Dephospho-CoA kinase
H.sapiens 1-198 -82.500 30  sp|Q8WVC6|DCAKD_HUMAN Dephospho-CoA kinase domain-containing protein OS=Homo sapiens GN=DCAKD PE=1 SV=1
HGM_OVER 1-86 -2.960 12  PB048276 _Gut.Meta.Jp.0112258_ gi|163310311|dbj|BABD01000385.1||2 (- 258:885~0 complete)
NEW_HUMAN_DOMAINS 6-98 -5.180 17  sp|Q6NZ63|STEAL_HUMAN STEAP family member 1B OS=Homo sapiens GN=STEAP1B PE=2 SV=1 (Range: 1-97)
PDB0614 1-199 -87.900 34  1uf9_A mol:protein length:203 TT1252 protein
PfamA27U 2-181 -78.100 28  PF01121.15; COAE_VIBVU/3-182; Dephospho-CoA kinase
SCOP175 1-195 -88.000 34  d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
VFDB 1-187 -9.870 17  VFG0274 (gi:15644698) ureG - urease accessory protein (ureG) [Helicobacter pylori 26695] (VF0050)
5 ACL93472.1 237 COG0614 1-229 -113.000 36  [L] COG0847 DNA polymerase III, epsilon subunit and related 3`-5` exonucleases
H.sapiens 3-197 -12.600 16  sp|Q9Y3B8|ORN_HUMAN Oligoribonuclease, mitochondrial OS=Homo sapiens GN=REXO2 PE=1 SV=3
5-168 -39.100 25  sp|Q9BQ50|TREX2_HUMAN Three prime repair exonuclease 2 OS=Homo sapiens GN=TREX2 PE=1 SV=1
HGM_OVER 40-164 -4.510 15  PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033;
NEW_HUMAN_DOMAINS 36-159 -5.030 21  sp|Q99932|SPAG8_HUMAN Sperm-associated antigen 8 OS=Homo sapiens GN=SPAG8 PE=1 SV=2 (Range: 202-321)
PDB0614 1-180 -107.000 43  2gui_A mol:protein length:194 DNA polymerase III epsilon subunit
PfamA27U 5-164 -101.000 46  PF00929.19; DPO3E_ECOLI/9-175; Exonuclease
SCOP175 3-169 -105.000 46  d2guia1 c.55.3.5 (A:7-180) N-terminal exonuclease domain of the epsilon subunit of DNA polymerase III {Escherichia coli [TaxId: 562]}
VFDB 47-158 -6.670 12  VFG2367 (gi:123443285) wbcH - putative glycosyl transferase [Yersinia enterocolitica 8081] (VF0392)
6 ACL93473.1 262 COG0614 7-262 -115.000 49  [I] KOG1680 Enoyl-CoA hydratase
H.sapiens 1-261 -110.000 55  sp|P30084|ECHM_HUMAN Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1 SV=4
HGM_OVER 98-226 -2.650 13  PB012771 _Gut.Meta.Jp.0094636_ gi|162817068|dbj|BABA01027641.1||1 (+ 249:636~0 complete)
NEW_HUMAN_DOMAINS 100-254 -4.780 13  sp|Q96GX1|TECT2_HUMAN Tectonic-2 OS=Homo sapiens GN=TCTN2 PE=2 SV=1 (Range: 1-170)
PDB0614 2-261 -117.000 57  1dub_A mol:protein length:261 2-ENOYL-COA HYDRATASE
PfamA27U 15-261 -74.600 25  PF00378.15; FADB_ECOLI/10-267; Enoyl-CoA hydratase/isomerase family
SCOP175 2-261 -117.000 57  d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]}
VFDB 95-156 -4.650 24  VFG0305 (gi:15645172) cag25 - cag pathogenicity island protein (cag25) [Helicobacter pylori 26695] (VF0060)
7 ACL93474.1 96 COG0614 6-92 -56.600 33  [J] COG0268 Ribosomal protein S20
H.sapiens 2-87 -6.930 16  sp|Q7Z353|HDX_HUMAN Highly divergent homeobox OS=Homo sapiens GN=HDX PE=1 SV=1 (Range: 451-690)
HGM_OVER 7-85 -3.580 15  PB002534 Q8H9W1_9CAUD/1-397 PB002534; Pfam-B_2534;
NEW_HUMAN_DOMAINS 1-84 -6.600 sp|Q8TBZ2|MYBPP_HUMAN MYCBP-associated protein OS=Homo sapiens GN=MYCBPAP PE=1 SV=2 (Range: 521-616)
PDB0614 1-96 -57.000 26  1fjg_T mol:protein length:106 30S RIBOSOMAL PROTEIN S20
PfamA27U 7-90 -46.700 27  PF01649.13; RS20_SYNY3/2-92; Ribosomal protein S20
SCOP175 8-96 -54.100 27  d2uubt1 a.7.6.1 (T:8-106) Ribosomal protein S20 {Thermus thermophilus [TaxId: 274]}
VFDB 16-84 -5.080 21  VFG0754 (gi:6009384) bfpD - BfpD, NTP-binding protein [Escherichia coli B171] (VF0174)
8 ACL93475.1 490 COG0614 22-490 -119.000 32  [L] COG0593 ATPase involved in DNA replication initiation
H.sapiens 159-490 -13.300 11  sp|Q99741|CDC6_HUMAN Cell division control protein 6 homolog OS=Homo sapiens GN=CDC6 PE=1 SV=1
HGM_OVER 198-319 -3.340 PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621;
NEW_HUMAN_DOMAINS 184-290 -4.550 13  sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens GN=DENND4A PE=1 SV=2 (Range: 1715-1863)
PDB0614 26-489 -107.000 25  2z4r_A mol:protein length:440 Chromosomal replication initiator protein dna
PfamA27U 24-87 -19.700 27  PF11638.3; DNAA_LAWIP/5-67; DnaA N-terminal domain
149-373 -91.000 37  PF00308.13; DNAA_STRCO/317-535; Bacterial dnaA protein
398-467 -43.100 64  PF08299.6; DNAA_PSEPU/414-483; Bacterial dnaA protein helix-turn-helix
SCOP175 145-408 -10.800 14  d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
147-368 -86.400 29  d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
397-490 -49.400 61  d1j1va_ a.4.12.2 (A:) Chromosomal replication initiation factor DnaA C-terminal domain IV {Escherichia coli [TaxId: 562]}
VFDB 145-328 -13.600 17  VFG1729 (gi:26249443) c3608 - Hypothetical protein [Escherichia coli CFT073]
9 ACL93476.1 206 COG0614 6-206 -93.400 52  [L] COG3145 Alkylated DNA repair protein
H.sapiens 10-206 -71.600 25  sp|Q13686|ALKB1_HUMAN Alkylated DNA repair protein alkB homolog 1 OS=Homo sapiens GN=ALKBH1 PE=1 SV=2
HGM_OVER 47-202 -3.080 PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361;
NEW_HUMAN_DOMAINS 108-206 -6.000 17  sp|Q9P015|RM15_HUMAN 39S ribosomal protein L15, mitochondrial OS=Homo sapiens GN=MRPL15 PE=1 SV=1 (Range: 210-296)
PDB0614 5-206 -91.200 37  4nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase Alk
PfamA27U 11-201 -88.700 40  PF13532.1; A3WP94_9GAMM/15-207; 2OG-Fe(II) oxygenase superfamily
SCOP175 8-203 -89.200 39  d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]}
VFDB 3-206 -5.550 VFG0074 (gi:16802248) hly - listeriolysin O precursor [Listeria monocytogenes (serovar 1/2a) EGD-e] (VF0064)
10 ACL93477.1 631 COG0614 1-630 -181.000 59  [O] COG0443 Molecular chaperone
H.sapiens 4-500 -128.000 32  sp|Q0VDF9|HSP7E_HUMAN Heat shock 70 kDa protein 14 OS=Homo sapiens GN=HSPA14 PE=1 SV=1
250-548 -114.000 67  sp|P38646|GRP75_HUMAN Stress-70 protein, mitochondrial OS=Homo sapiens GN=HSPA9 PE=1 SV=2 (Range: 301-600)
292-581 -86.400 52  sp|P11021|GRP78_HUMAN(removed signalp:1-18) 78 kDa glucose-regulated protein OS=Homo sapiens GN=HSPA5 PE=1 SV=2 (Range: 301-600)
400-620 -81.200 52  sp|P38646|GRP75_HUMAN Stress-70 protein, mitochondrial OS=Homo sapiens GN=HSPA9 PE=1 SV=2 (Range: 451-679)
HGM_OVER 108-267 -3.890 20  HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066;
NEW_HUMAN_DOMAINS 377-497 -11.400 19  sp|O43301|HS12A_HUMAN Heat shock 70 kDa protein 12A OS=Homo sapiens GN=HSPA12A PE=1 SV=2 (Range: 520-675)
PDB0614 1-600 -187.000 66  2kho_A mol:protein length:605 Heat shock protein 70
1-631 -128.000 25  3d2e_A mol:protein length:675 Heat shock protein homolog SSE1
PfamA27U 4-599 -187.000 62  PF00012.15; HSP77_YEASX/32-633; Hsp70 protein
SCOP175 2-184 -74.400 57  d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]}
184-378 -59.600 49  d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]}
384-501 -75.000 72  d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]}
502-597 -40.900 52  d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]}
VFDB 2-400 -9.640 18  VFG1222 (gi:15600237) pilM - type 4 fimbrial biogenesis protein PilM [Pseudomonas aeruginosa PAO1] (VF0082)
11 ACL93478.1 385 COG0614 1-380 -132.000 45  [O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain
H.sapiens 1-381 -122.000 31  sp|Q96EY1|DNJA3_HUMAN(removed signalp:1-21) DnaJ homolog subfamily A member 3, mitochondrial OS=Homo sapiens GN=DNAJA3 PE=1 SV=2
HGM_OVER 124-226 -4.840 18  HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;
NEW_HUMAN_DOMAINS 4-203 -7.240 14  sp|Q9UG01|IF172_HUMAN Intraflagellar transport protein 172 homolog OS=Homo sapiens GN=IFT172 PE=1 SV=2 (Range: 1539-1749)
PDB0614 2-362 -79.900 35  3lz8_A mol:protein length:329 Putative chaperone DnaJ
PfamA27U 3-65 -41.600 54  PF00226.26; Q22028_CAEEL/17-79; DnaJ domain
8-103 -19.000 10  PF14687.1; A7RRF5_NEMVE/89-191; Domain of unknown function (DUF4460 topsan)
148-208 -31.700 42  PF00684.14; DNAJ1_CORGL/147-211; DnaJ central domain
266-351 -23.100 25  PF01556.13; A2FIH5_TRIVA/258-337; DnaJ C terminal domain
SCOP175 1-74 -49.200 55  d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}
1-110 -36.100 18  d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}
119-258 -17.900 16  d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
135-213 -45.600 55  d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}
260-354 -26.600 30  d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
VFDB 102-341 -4.980 12  VFG1493 (gi:24528024) ORF42 - FasG-like protein [Escherichia coli 536]
12 ACL93479.1 903 COG0614 16-901 -192.000 34  [L] COG0249 Mismatch repair ATPase (MutS family)
H.sapiens 11-195 -44.300 27  sp|P52701|MSH6_HUMAN DNA mismatch repair protein Msh6 OS=Homo sapiens GN=MSH6 PE=1 SV=2 (Range: 301-600)
95-347 -43.400 24  sp|P20585|MSH3_HUMAN DNA mismatch repair protein Msh3 OS=Homo sapiens GN=MSH3 PE=1 SV=4 (Range: 301-600)
285-584 -50.200 20  sp|P43246|MSH2_HUMAN DNA mismatch repair protein Msh2 OS=Homo sapiens GN=MSH2 PE=1 SV=1 (Range: 301-600)
353-663 -51.200 16  sp|O43196|MSH5_HUMAN MutS protein homolog 5 OS=Homo sapiens GN=MSH5 PE=1 SV=1 (Range: 301-600)
435-736 -76.800 30  sp|P43246|MSH2_HUMAN DNA mismatch repair protein Msh2 OS=Homo sapiens GN=MSH2 PE=1 SV=1 (Range: 451-750)
502-810 -90.600 33  sp|P20585|MSH3_HUMAN DNA mismatch repair protein Msh3 OS=Homo sapiens GN=MSH3 PE=1 SV=4 (Range: 751-1050)
585-886 -90.900 34  sp|P43246|MSH2_HUMAN DNA mismatch repair protein Msh2 OS=Homo sapiens GN=MSH2 PE=1 SV=1 (Range: 601-900)
HGM_OVER 490-629 -4.160 11  PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791;
NEW_HUMAN_DOMAINS 647-790 -5.020 15  sp|Q86WI1|PKHL1_HUMAN Fibrocystin-L OS=Homo sapiens GN=PKHD1L1 PE=2 SV=2 (Range: 3997-4187)
PDB0614 7-886 -166.000 24  3thw_B mol:protein length:918 DNA mismatch repair protein Msh3
10-841 -213.000 37  1e3m_A mol:protein length:800 DNA MISMATCH REPAIR PROTEIN MUTS
PfamA27U 19-136 -71.800 67  PF01624.15; MUTS_AGRT5/20-137; MutS domain I
144-272 -32.800 23  PF05188.12; MUTS_SYNY3/150-289; MutS domain II
287-593 -74.900 31  PF05192.13; Q6MLQ3_BDEBA/243-530; MutS domain III
601-840 -88.000 38  PF00488.16; MSH6_SCHPO/974-1211; MutS domain V
SCOP175 10-129 -65.300 51  d1wb9a4 d.75.2.1 (A:2-116) DNA repair protein MutS, domain I {Escherichia coli [TaxId: 562]}
130-285 -40.100 23  d1wb9a3 c.55.6.1 (A:117-269) DNA repair protein MutS, domain II {Escherichia coli [TaxId: 562]}
286-600 -77.200 30  d1wb9a1 a.113.1.1 (A:270-566) DNA repair protein MutS, domain III {Escherichia coli [TaxId: 562]}
601-841 -98.200 50  d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
VFDB 7-901 -222.000 37  VFG0562 (gi:16766215) mutS - methyl-directed mismatch repair, recognize exocyclic adducts of guanosine [Salmonella enterica (serovar typhimurium) LT2]
13 ACL93480.1 940 COG0614 11-923 -197.000 27  [O] COG2844 UTP:GlnB (protein PII) uridylyltransferase
H.sapiens 462-674 -8.060 14  sp|O76083|PDE9A_HUMAN High affinity cGMP-specific 3`,5`-cyclic phosphodiesterase 9A OS=Homo sapiens GN=PDE9A PE=1 SV=1
HGM_OVER 492-654 -5.350 13  PB047024 _Gut.Meta.Jp.0098985_ gi|162869273|dbj|BABB01000734.1||6 (+ 5047:5650~0 complete)
NEW_HUMAN_DOMAINS 568-640 -7.300 13  sp|O60813|PRA11_HUMAN PRAME family member 11 OS=Homo sapiens GN=PRAMEF11 PE=2 SV=3 (Range: 1-79)
PDB0614 15-305 -16.200 17  3k7d_A mol:protein length:498 Glutamate-ammonia-ligase adenylyltransferase
215-632 -21.900 19  3wfo_A mol:protein length:525 Poly A polymerase
458-679 -10.900 12  2pq7_A mol:protein length:220 Predicted HD superfamily hydrolase
738-940 -10.500 15  2nyi_A mol:protein length:195 unknown protein
PfamA27U 15-197 -10.100 19  PF03710.10; GLNE_ECOLI/552-806; Glutamate-ammonia ligase adenylyltransferase
210-350 -71.400 37  PF08335.6; A1K6S3_AZOSB/170-310; GlnD PII-uridylyltransferase
845-913 -9.510 18  PF13740.1; C4UDS4_YERAL/13-88; ACT domain
SCOP175 71-201 -12.900 11  d1knya2 d.218.1.1 (A:1-125) Kanamycin nucleotidyltransferase (KNTase), N-terminal domain {Staphylococcus aureus [TaxId: 1280]}
214-350 -11.100 14  d1v4aa1 a.24.16.4 (A:287-437) Glutamine synthase adenylyltransferase GlnE, domain 2 {Escherichia coli [TaxId: 562]}
391-638 -11.700 14  d1vfga1 a.173.1.1 (A:137-351) Poly A polymerase PcnB {Aquifex aeolicus [TaxId: 63363]}
458-679 -11.300 12  d2pq7a1 a.211.1.1 (A:1-217) Predicted hydrolase mes0020 {Uncultured thermotogales bacterium [TaxId: 221214]}
VFDB 107-772 -7.810 10  VFG2289 (gi:28373188) tetX - tetanus toxin tetX [Clostridium tetani E88] (VF0374)
14 ACL93481.1 158 COG0614 1-156 -103.000 60  [H] COG0315 Molybdenum cofactor biosynthesis enzyme
H.sapiens 1-155 -93.800 49  sp|Q9NZB8|MOCS1_HUMAN Molybdenum cofactor biosynthesis protein 1 OS=Homo sapiens GN=MOCS1 PE=1 SV=3 (Range: 451-636)
HGM_OVER 33-126 -4.080 13  PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF
NEW_HUMAN_DOMAINS 2-68 -6.090 18  sp|O95260|ATE1_HUMAN Arginyl-tRNA--protein transferase 1 OS=Homo sapiens GN=ATE1 PE=1 SV=2 (Range: 433-518)
PDB0614 1-157 -103.000 59  1ekr_A mol:protein length:161 MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN C
PfamA27U 15-148 -90.100 61  PF01967.16; MOAC_HAEIN/15-150; MoaC family
SCOP175 11-154 -96.500 61  d1ekra_ d.58.21.1 (A:) Molybdenum cofactor biosynthesis protein C, MoaC {Escherichia coli [TaxId: 562]}
VFDB 18-148 -5.260 15  VFG0207 (gi:15596909) exsB - exoenzyme S synthesis protein B [Pseudomonas aeruginosa PAO1] (VF0083)
15 ACL93482.1 183 COG0614 19-163 -42.600 22  [H] COG0521 Molybdopterin biosynthesis enzymes
H.sapiens 19-160 -40.000 31  sp|Q9NQX3|GEPH_HUMAN Gephyrin OS=Homo sapiens GN=GPHN PE=1 SV=1 (Range: 1-300)
HGM_OVER 21-117 -4.530 12  HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066;
NEW_HUMAN_DOMAINS 90-151 -5.380 21  sp|Q16650|TBR1_HUMAN T-box brain protein 1 OS=Homo sapiens GN=TBR1 PE=1 SV=1 (Range: 485-568)
PDB0614 12-181 -97.400 41  1mkz_A mol:protein length:172 Molybdenum cofactor biosynthesis protein B
PfamA27U 24-166 -19.100 22  PF00994.19; CINAL_DESPS/4-169; Probable molybdopterin binding domain
SCOP175 12-181 -97.900 41  d1mkza_ c.57.1.1 (A:) MoaB {Escherichia coli [TaxId: 562]}
VFDB 21-153 -6.330 12  VFG0962 (gi:15675933) hasA - hyaluronate synthase [Streptococcus pyogenes SF370] (VF0244)
16 ACL93483.1 150 COG0614 1-146 -90.400 44  [H] COG0314 Molybdopterin converting factor, large subunit
H.sapiens 2-144 -70.300 23  sp|O96007|MOC2B_HUMAN Molybdopterin synthase catalytic subunit OS=Homo sapiens GN=MOCS2 PE=1 SV=1
HGM_OVER 79-146 -6.160 14  PB047024 _Gut.Meta.Jp.0098985_ gi|162869273|dbj|BABB01000734.1||6 (+ 5047:5650~0 complete)
NEW_HUMAN_DOMAINS 45-136 -6.270 12  sp|Q86X10|RLGPB_HUMAN Ral GTPase-activating protein subunit beta OS=Homo sapiens GN=RALGAPB PE=1 SV=1 (Range: 744-867)
PDB0614 1-146 -90.200 45  1fm0_E mol:protein length:150 MOLYBDOPTERIN CONVERTING FACTOR, SUBUNIT 2
PfamA27U 2-118 -57.800 23  PF02391.12; MOC2B_ARATH/10-126; MoaE protein
SCOP175 1-146 -90.500 45  d1fm0e_ d.41.5.1 (E:) Molybdopterin synthase subunit MoaE {Escherichia coli [TaxId: 562]}
VFDB 27-69 -5.480 12  VFG1211 (gi:15599751) pilY2 - type 4 fimbrial biogenesis protein PilY2 [Pseudomonas aeruginosa PAO1] (VF0082)
17 ACL93484.1 79 COG0614 2-79 -26.600 26  [H] COG1977 Molybdopterin converting factor, small subunit
H.sapiens 2-79 -46.700 26  sp|O96033|MOC2A_HUMAN Molybdopterin synthase sulfur carrier subunit OS=Homo sapiens GN=MOCS2 PE=1 SV=1
HGM_OVER 6-77 -2.820 11  PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;
NEW_HUMAN_DOMAINS 11-78 -5.520 sp|Q96RR1|PEO1_HUMAN Twinkle protein, mitochondrial OS=Homo sapiens GN=PEO1 PE=1 SV=1 (Range: 1-120)
PDB0614 1-79 -57.400 30  1nvi_D mol:protein length:81 Molybdopterin converting factor subunit 1
PfamA27U 2-77 -24.600 16  PF14451.1; Q13TC6_BURXL/1-81; Mut7-C ubiquitin
SCOP175 1-79 -57.200 30  d1fm0d_ d.15.3.1 (D:) Molybdopterin synthase subunit MoaD {Escherichia coli [TaxId: 562]}
VFDB 7-77 -3.980 12  VFG2054 (gi:82778258) gspK - putative type II secretion protein [Shigella dysenteriae Sd197] (VF0333)
18 ACL93485.1 349 COG0614 9-349 -118.000 66  [H] COG2896 Molybdenum cofactor biosynthesis enzyme
H.sapiens 6-263 -83.000 33  sp|Q9NZB8|MOCS1_HUMAN Molybdenum cofactor biosynthesis protein 1 OS=Homo sapiens GN=MOCS1 PE=1 SV=3 (Range: 1-300)
115-349 -76.100 31  sp|Q9NZB8|MOCS1_HUMAN Molybdenum cofactor biosynthesis protein 1 OS=Homo sapiens GN=MOCS1 PE=1 SV=3 (Range: 151-450)
HGM_OVER 31-279 -3.280 11  HGC00921 gi|162841401|dbj|BABA01003308.1|3.0 TMP01242;
NEW_HUMAN_DOMAINS 269-322 -5.690 18  sp|Q6IQ32|ADNP2_HUMAN ADNP homeobox protein 2 OS=Homo sapiens GN=ADNP2 PE=2 SV=1 (Range: 210-266)
PDB0614 20-349 -105.000 32  1tv7_A mol:protein length:340 Molybdenum cofactor biosynthesis protein A
PfamA27U 36-197 -11.300 16  PF04055.16; CDKAL_HUMAN/208-381; Radical SAM superfamily
204-331 -50.400 43  PF06463.8; MOAA_PSESM/185-315; Molybdenum Cofactor Synthesis C
SCOP175 21-342 -104.000 32  d1tv8a_ c.1.28.3 (A:) Molybdenum cofactor biosynthesis protein A MoaA {Staphylococcus aureus [TaxId: 1280]}
VFDB 31-301 -30.600 11  VFG1961 (gi:15792751) Cj1433c - hypothetical protein Cj1433c [Campylobacter jejuni NCTC 11168] (VF0323)
19 ACL93486.1 210 COG0614 1-209 -77.400 31  [R] COG2068 Uncharacterized MobA-related protein
H.sapiens 2-209 -15.200 16  sp|A4D126|ISPD_HUMAN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase-like protein OS=Homo sapiens GN=ISPD PE=3 SV=2
HGM_OVER 9-111 -2.810 13  PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791;
NEW_HUMAN_DOMAINS 88-208 -4.700 20  tr|B4DF73|B4DF73_HUMAN Uncharacterized protein OS=Homo sapiens GN=PTCD3 PE=2 SV=1 (Range: 61-208)
PDB0614 8-209 -77.500 28  3d5n_A mol:protein length:197 Q97W15_SULSO
PfamA27U 9-209 -17.200 20  PF01128.14; ISPD_ECOLI/8-229; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
11-177 -34.900 22  PF12804.2; Q5WJM4_BACSK/5-167; MobA-like NTP transferase domain
SCOP175 7-204 -27.100 24  d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]}
VFDB 9-209 -21.100 13  VFG0328 (gi:16273439) lic1C - lic-1 operon protein (licC) [Haemophilus influenzae Rd] (VF0044)
20 ACL93487.1 74 COG0614 35-66 -5.830 15  [U] COG4537 Competence protein ComGC
H.sapiens 11-68 -8.000 10  sp|Q9BY10|TSCOT_HUMAN Thymic stromal cotransporter homolog OS=Homo sapiens GN=SLC46A2 PE=2 SV=1
HGM_OVER 19-65 -4.470 14  PB062605 Q9F6T7_BACTN/1-105 PB062605; Pfam-B_62605;
NEW_HUMAN_DOMAINS 21-57 -5.580 21  sp|Q12947|FOXF2_HUMAN Forkhead box protein F2 OS=Homo sapiens GN=FOXF2 PE=1 SV=2 (Range: 193-254)
PDB0614 1-70 -6.070 17  2hjs_A mol:protein length:340 USG-1 protein homolog
PfamA27U 1-65 -6.830 20  PF09543.5; Q098Z5_STIAD/2-123; Protein of unknown function (DUF2379 topsan)
SCOP175 1-70 -7.050 17  d2hjsa2 d.81.1.1 (A:130-319) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}
VFDB 11-65 -4.600 11  VFG0063 (gi:33593259) orf1 - conserved hypothetical protein [Bordetella pertussis Tohama I] (VF0035)


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Ginalski K, Grishin NV, Godzik A., Rychlewski L. Practical lessons from protein structure prediction. Nucleic Acids Res. 2005 Apr 1;33(6):1874-91.