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# Query Length Result vs. Range Score %id Covered by template(s)
1 sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2 (Range: 142-330) 189 COG1214 1-118 -9.930 10  [U] KOG3088 Secretory carrier membrane protein
H.sapiens 1-159 -59.100 100  sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2 (Range: 1-300)
11-189 -54.200 100  sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2 (Range: 151-450)
HGM_OVER 62-115 -5.520 14  PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;
JCSG1214 79-188 -7.370 SP19049A NP_290530.1 411014 Selected-2009-11-12
NEW_HUMAN_DOMAINS 70-129 -34.800 30  sp|Q7Z3B3|K1267_HUMAN MLL1/MLL complex subunit KIAA1267 OS=Homo sapiens GN=KIAA1267 PE=1 SV=2 (Range: 269-330)
PDB1214 70-127 -7.390 3u1d_A mol:protein length:151 uncharacterized protein
PfamA27U 81-115 -7.910 17  PF11851.3; Q5XHC0_XENLA/281-429; Domain of unknown function (DUF3371 topsan)
SCOP175 93-186 -5.860 10  d2i5ea1 c.68.1.21 (A:1-208) Hypothetical protein MM2497 {Methanosarcina mazei [TaxId: 2209]}
VFDB 61-130 -5.370 12  VFG0690 (gi:30962639) bsc3 - Bsc3 [Haemophilus influenzae 1007] (VF0043)
2 sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2 (Range: 362-412) 51 COG1214 11-49 -5.150 17  [S] COG3644 Uncharacterized protein conserved in bacteria
H.sapiens 1-51 -36.900 100  sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2 (Range: 151-450)
HGM_OVER 14-49 -4.940 19  HGC00878 gi|162869432|dbj|BABB01000575.1|7.0 TMP01167;
JCSG1214 16-49 -5.690 23  RH20267B ZP_02068282.1 415517 Selected-2009-12-04
NEW_HUMAN_DOMAINS 14-36 -7.310 13  sp|O95071|UBR5_HUMAN E3 ubiquitin-protein ligase UBR5 OS=Homo sapiens GN=UBR5 PE=1 SV=2 (Range: 1790-1859)
PDB1214 16-49 -5.880 17  3bj4_A mol:protein length:49 Potassium voltage-gated channel subfamily KQT
PfamA27U 10-49 -6.810 20  PF08733.5; A6ZSI4_YEAS7/16-364; PalH/RIM21
SCOP175 17-40 -6.160 29  d1uuja_ a.221.1.1 (A:) Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
VFDB 10-51 -4.090 14  VFG1455 (gi:24527987) ORF4 - hypothetical protein [Escherichia coli 536]
3 sp|A0AVF1|TTC26_HUMAN Tetratricopeptide repeat protein 26 OS=Homo sapiens GN=TTC26 PE=2 SV=1 (Range: 486-554) 69 COG1214 3-59 -5.450 18  [T] KOG3941 Intermediate in Toll signal transduction pathway (ECSIT)
H.sapiens 1-69 -30.000 100  sp|A0AVF1|TTC26_HUMAN Tetratricopeptide repeat protein 26 OS=Homo sapiens GN=TTC26 PE=2 SV=1
HGM_OVER 1-65 -3.230 18  PB004996 Q5NNS6_ZYMMO/1-150 PB004996; Pfam-B_4996;
JCSG1214 17-64 -5.560 12  SP19135A YP_001301310.1 409938 Purified-2010-09-29
NEW_HUMAN_DOMAINS 16-69 -34.400 100  tr|B7Z2T3|B7Z2T3_HUMAN Uncharacterized protein OS=Homo sapiens GN=TTC26 PE=2 SV=1 (Range: 370-423)
PDB1214 1-23 -6.630 39  2d8h_A mol:protein length:80 SH3YL1 protein
PfamA27U 13-66 -6.120 19  PF15063.1; B0BND1_RAT/7-85; Thyroid cancer protein 1
SCOP175 1-23 -6.310 30  d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
VFDB 1-67 -5.210 16  VFG2363 (gi:123443281) manC - mannose-1-phosphate guanylyltransferase [Yersinia enterocolitica 8081] (VF0392)
4 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 1-215) 215 COG1214 96-173 -6.850 14  [I] KOG0817 Acyl-CoA-binding protein
H.sapiens 1-215 -73.800 99  sp|Q7Z2W7|TRPM8_HUMAN Transient receptor potential cation channel subfamily M member 8 OS=Homo sapiens GN=TRPM8 PE=2 SV=2 (Range: 301-600)
HGM_OVER 85-167 -3.200 15  PB044822 Q89ZL7_BACTN/1-147 PB044822; Pfam-B_44822;
JCSG1214 96-174 -7.790 13  SP18983A NP_253302.1 413233 Purified-2010-05-11
NEW_HUMAN_DOMAINS 1-201 -75.000 34  sp|Q9NZQ8|TRPM5_HUMAN Transient receptor potential cation channel subfamily M member 5 OS=Homo sapiens GN=TRPM5 PE=1 SV=1 (Range: 174-435)
PDB1214 93-173 -8.710 3ehq_A mol:protein length:222 Osteoclast-stimulating factor 1
PfamA27U 1-174 -7.110 PF06128.6; Q3YTS0_SHISS/191-482; Shigella flexneri OspC protein
SCOP175 12-173 -8.100 11  d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
VFDB 1-175 -6.690 13  VFG1103 (gi:15641773) VC1770 - hypothetical protein [Vibrio cholerae N16961]
5 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 240-290) 51 COG1214 22-51 -4.920 16  [U] COG0690 Preprotein translocase subunit SecE
H.sapiens 1-49 -29.000 100  sp|Q7Z2W7|TRPM8_HUMAN Transient receptor potential cation channel subfamily M member 8 OS=Homo sapiens GN=TRPM8 PE=2 SV=2 (Range: 301-600)
HGM_OVER 15-45 -2.640 16  PB000716 Q60CS7_METCA/1-294 PB000716; Pfam-B_716;
JCSG1214 6-31 -4.860 19  TM0026 TM0026 281907 Purified-2001-01-30
NEW_HUMAN_DOMAINS 6-51 -30.200 32  sp|Q8TD43|TRPM4_HUMAN Transient receptor potential cation channel subfamily M member 4 OS=Homo sapiens GN=TRPM4 PE=1 SV=1 (Range: 553-687)
PDB1214 19-51 -5.210 18  3j45_E mol:protein length:56 Preprotein translocase subunit SecE
PfamA27U 21-51 -5.630 PF14414.1; B4EP57_BURCJ/1370-1412; A nuclease of the HNH/ENDO VII superfamily with conserved WHH
SCOP175 11-51 -4.540 d2omza1 b.1.18.15 (A:417-495) Internalin A {Listeria monocytogenes [TaxId: 1639]}
VFDB 12-39 -3.730 14  VFG1517 (gi:24528046) l0014 - L0014 protein [Escherichia coli 536]
6 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 311-360) 50 COG1214 5-49 -3.190 15  [K] COG3682 Predicted transcriptional regulator
H.sapiens 1-50 -27.900 48  sp|O94759|TRPM2_HUMAN Transient receptor potential cation channel subfamily M member 2 OS=Homo sapiens GN=TRPM2 PE=1 SV=2 (Range: 451-750)
HGM_OVER 9-50 -1.990 14  PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;
JCSG1214 29-50 -5.110 18  TM1343 TM1343 372112 Purified-2001-11-06
NEW_HUMAN_DOMAINS 1-50 -33.300 44  sp|Q9HCF6|TRPM3_HUMAN Transient receptor potential cation channel subfamily M member 3 OS=Homo sapiens GN=TRPM3 PE=2 SV=4 (Range: 703-800)
PDB1214 10-45 -6.070 22  3j0g_M mol:protein length:59 E3 protein
PfamA27U 10-45 -5.580 16  PF01563.11; POLS_SAGV/274-332; Alphavirus E3 glycoprotein
SCOP175 10-36 -4.500 14  d2pkgc1 g.92.1.1 (C:91-170) Small t antigen, ST-AG {Simian virus 40 [TaxId: 10633]}
VFDB 12-50 -3.000 10  VFG1703 (gi:26249401) c3566 - Hypothetical protein [Escherichia coli CFT073]
7 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 431-614) 184 COG1214 3-143 -6.160 13  [M] COG0682 Prolipoprotein diacylglyceryltransferase
H.sapiens 1-181 -93.700 40  sp|Q9NZM1|MYOF_HUMAN Myoferlin OS=Homo sapiens GN=MYOF PE=1 SV=1 (Range: 451-750)
HGM_OVER 20-145 -3.600 PB004588 Q64QH1_BACFR/1-389 PB004588; Pfam-B_4588;
JCSG1214 2-177 -6.850 10  SP18800A ZP_02032838.1 413069 Selected-2009-11-12
NEW_HUMAN_DOMAINS 19-172 -96.300 43  sp|Q9NZM1|MYOF_HUMAN Myoferlin OS=Homo sapiens GN=MYOF PE=1 SV=1 (Range: 521-676)
PDB1214 22-99 -7.020 14  4ok7_A mol:protein length:223 Endolysin
PfamA27U 2-177 -6.850 PF05896.6; A4SQM0_AERS4/1-257; Na(+)-translocating NADH-quinone reductase subunit A (NQRA)
SCOP175 6-99 -6.380 15  d1ntva_ b.55.1.2 (A:) Disabled homolog 1 (Dab1) {Mouse (Mus musculus) [TaxId: 10090]}
VFDB 2-145 -5.750 10  VFG1493 (gi:24528024) ORF42 - FasG-like protein [Escherichia coli 536]
8 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 1641-1750) 110 COG1214 5-86 -9.740 18  [S] COG4681 Uncharacterized protein conserved in bacteria
H.sapiens 11-110 -53.400 100  sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 1651-1950)
HGM_OVER 51-88 -3.950 PB034883 _HOMD.0130261_ bfor_c_1_4664 Tannerella forsythia ATCC 43037 [1809083 - 1810348] ORF
JCSG1214 8-110 -7.330 14  RH20236A NP_631770.1 415812 Selected-2009-12-04
NEW_HUMAN_DOMAINS 1-108 -70.900 47  sp|O75923|DYSF_HUMAN Dysferlin OS=Homo sapiens GN=DYSF PE=1 SV=1 (Range: 1705-1811)
PDB1214 2-86 -10.000 17  3c0u_A mol:protein length:183 Uncharacterized protein yaeQ
PfamA27U 5-86 -9.700 12  PF07152.7; Q2BN25_9GAMM/15-189; YaeQ protein
SCOP175 5-86 -9.920 14  d2ot9a1 c.52.1.33 (A:2-180) Hypothetical protein PSPTO1487 {Pseudomonas syringae pv. tomato [TaxId: 323]}
VFDB 43-110 -6.380 14  VFG0954 (gi:21910456) ssa - streptococcal superantigen SSA - phage associated [Streptococcus pyogenes (serotype M3) MGAS315] (VF0248)
9 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 2018-2093) 76 COG1214 5-41 -6.650 21  [R] COG3302 DMSO reductase anchor subunit
H.sapiens 1-76 -47.600 100  sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 1801-2093)
HGM_OVER 3-71 -3.830 11  PB025553 _HOMD.0078651_ pint_c_1_4510 Prevotella intermedia 17 [1755134 - 1755736] ORF
JCSG1214 7-34 -6.590 21  TM0976 TM0976 282845 Purified-2001-10-30
NEW_HUMAN_DOMAINS 15-70 -6.550 12  sp|Q9Y4D2|DGLA_HUMAN Sn1-specific diacylglycerol lipase alpha OS=Homo sapiens GN=DAGLA PE=1 SV=3 (Range: 594-664)
PDB1214 1-71 -6.750 15  3fef_A mol:protein length:450 Putative glucosidase lplD, ALPHA-GALACTURONID
PfamA27U 3-71 -8.330 15  PF13078.1; A7GP50_BACCN/28-153; Protein of unknown function (DUF3942 topsan)
SCOP175 1-56 -5.720 12  d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
VFDB 1-72 -3.510 25  VFG2225 (gi:17987696) gmd - GDP-mannose 4,6-dehydratase [Brucella melitensis 16M] (VF0367)
10 sp|A0AVK6|E2F8_HUMAN Transcription factor E2F8 OS=Homo sapiens GN=E2F8 PE=1 SV=1 (Range: 470-543) 74 COG1214 2-74 -6.170 22  [K] KOG3915 Transcription regulator dachshund, contains SKI/SNO domain
H.sapiens 1-74 -21.300 100  sp|A0AVK6|E2F8_HUMAN Transcription factor E2F8 OS=Homo sapiens GN=E2F8 PE=1 SV=1 (Range: 451-750)
HGM_OVER 39-57 -3.670 15  PB034883 _HOMD.0130261_ bfor_c_1_4664 Tannerella forsythia ATCC 43037 [1809083 - 1810348] ORF
JCSG1214 28-61 -6.120 CL5926B 16419207 359581 Purified-2005-08-11
NEW_HUMAN_DOMAINS 54-72 -5.890 15  sp|Q5SW24|DACT2_HUMAN Dapper homolog 2 OS=Homo sapiens GN=DACT2 PE=2 SV=1 (Range: 219-291)
PDB1214 24-60 -7.340 24  2fpq_A mol:protein length:444 BOTULINUM NEUROTOXIN D LIGHT CHAIN
PfamA27U 36-56 -9.040 33  PF16021; E3X5P5.1/61-364; Programmed cell death protein 7
SCOP175 20-74 -6.430 27  d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]}
VFDB 20-56 -5.230 18  VFG1975 (gi:15792765) kpsM - putative capsule polysaccharide export system inner membrane protein [Campylobacter jejuni NCTC 11168] (VF0323)
11 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 117-259) 143 COG1214 1-143 -31.800 12  [U] COG5043 Vacuolar protein sorting-associated protein
H.sapiens 1-143 -49.000 14  sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1 (Range: 151-450)
HGM_OVER 5-42 -4.170 16  HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000;
JCSG1214 8-136 -6.780 SP18889A NP_251398.1 413150 Selected-2009-11-12
NEW_HUMAN_DOMAINS 1-113 -58.600 64  sp|Q6BDS2|URFB1_HUMAN UHRF1-binding protein 1 OS=Homo sapiens GN=UHRF1BP1 PE=1 SV=1 (Range: 117-230)
1-143 -57.300 11  sp|Q7Z7G8|VP13B_HUMAN Vacuolar protein sorting-associated protein 13B OS=Homo sapiens GN=VPS13B PE=1 SV=2 (Range: 142-291)
PDB1214 2-32 -5.900 12  2ko1_A mol:protein length:88 GTP pyrophosphokinase
PfamA27U 1-143 -51.300 13  PF16908; Q6CQ11.1/136-368; Vacuolar sorting-associated protein 13, N-terminal
SCOP175 7-135 -5.930 14  d1qnaa1 d.129.1.1 (A:17-115) TATA-box binding protein (TBP), C-terminal domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
VFDB 1-43 -4.310 14  VFG0225 (gi:15677977) pilS - pilS cassette [Neisseria meningitidis MC58 (serogroup B)] (VF0075)
12 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 309-401) 93 COG1214 7-67 -7.510 25  [S] COG3108 Uncharacterized protein conserved in bacteria
H.sapiens 1-93 -70.600 52  sp|Q6BDS2|URFB1_HUMAN UHRF1-binding protein 1 OS=Homo sapiens GN=UHRF1BP1 PE=1 SV=1 (Range: 301-600)
HGM_OVER 19-93 -2.920 HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;
JCSG1214 7-69 -7.990 19  TT7018C YP_352831.1 404085 Selected-2009-08-14
NEW_HUMAN_DOMAINS 1-85 -71.000 54  sp|Q6BDS2|URFB1_HUMAN UHRF1-binding protein 1 OS=Homo sapiens GN=UHRF1BP1 PE=1 SV=1 (Range: 309-398)
PDB1214 3-93 -6.710 17  3bkw_A mol:protein length:243 S-adenosylmethionine dependent methyltransfer
PfamA27U 7-67 -7.580 25  PF05951.8; Q8YE08_BRUME/24-176; Bacterial protein of unknown function (DUF882 topsan)
SCOP175 6-93 -6.560 19  d1jkea_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Escherichia coli [TaxId: 562]}
VFDB 21-93 -5.260 13  VFG1812 (gi:15609023) fbpB - fbpB [Mycobacterium tuberculosis H37Rv] (VF0311)
13 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 488-662) 175 COG1214 1-118 -6.020 14  [E] COG0076 Glutamate decarboxylase and related PLP-dependent proteins
H.sapiens 1-175 -90.000 100  sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 451-750)
HGM_OVER 8-175 -4.810 PB012823 Q5LCS8_BACFN/1-272 PB012823; Pfam-B_12823;
JCSG1214 84-173 -6.080 SP17948B ZP_02026760.1 411437 Purified-2010-11-20
NEW_HUMAN_DOMAINS 3-175 -94.200 49  sp|Q6BDS2|URFB1_HUMAN UHRF1-binding protein 1 OS=Homo sapiens GN=UHRF1BP1 PE=1 SV=1 (Range: 498-728)
PDB1214 16-165 -9.150 13  2wzp_A mol:protein length:266 PUTATIVE RECEPTOR BINDING PROTEIN
PfamA27U 34-138 -7.950 15  PF16910; D6WCW1.1/568-801; Repeating coiled region of VPS13
SCOP175 7-147 -6.110 10  d1n1ca_ a.184.1.1 (A:) TorA specific chaperone TorD {Shewanella massilia [TaxId: 76854]}
VFDB 58-168 -4.500 VFG1436 (gi:994755) cofA - CFA/III pilin [Escherichia coli] (VF0213)
14 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 1275-1361) 87 COG1214 1-87 -5.800 12  [S] COG3502 Uncharacterized protein conserved in bacteria
H.sapiens 1-86 -58.100 100  sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 1201-1464)
HGM_OVER 11-51 -4.020 12  PB009534 gi|153852721|ref|ZP_01994158.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]gi|149754363|gb|EDM64294.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]
JCSG1214 3-82 -5.460 11  MJ5690A NP_384478.1 403604 Crystal|NMR-2009-11-14
NEW_HUMAN_DOMAINS 18-74 -7.650 20  sp|A2A3K4|PTPC1_HUMAN Protein tyrosine phosphatase domain-containing protein 1 OS=Homo sapiens GN=PTPDC1 PE=2 SV=1 (Range: 396-482)
PDB1214 8-87 -7.310 2bh8_A mol:protein length:101 1B11
PfamA27U 10-86 -7.720 10  PF09191.5; CD4_DELLE/205-313; CD4, extracellular
SCOP175 10-86 -9.220 13  d1cida1 b.1.1.1 (A:1-105) CD4 V-set domains {Rat (Rattus rattus) [TaxId: 10117]}
VFDB 2-82 -4.290 16  VFG1116 (gi:15641786) nagC - N-acetylglucosamine-6-phosphate deacetylase [Vibrio cholerae N16961]
15 sp|A0PJM3|GORL_HUMAN Putative exonuclease GOR-like protein OS=Homo sapiens GN=REXO1L2P PE=5 SV=2 (Range: 195-290) 96 COG1214 16-92 -5.900 16  [H] COG0262 Dihydrofolate reductase
H.sapiens 1-69 -42.900 34  sp|P0C843|CI014_HUMAN Putative uncharacterized protein encoded by NCRNA00032 OS=Homo sapiens GN=NCRNA00032 PE=5 SV=1
HGM_OVER 28-88 -4.090 18  HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;
JCSG1214 12-93 -5.660 14  TT16488A YP_001088576.1 404816 Selected-2009-08-14
NEW_HUMAN_DOMAINS 2-96 -70.900 100  sp|Q8IX06|GOR_HUMAN Exonuclease GOR OS=Homo sapiens GN=REXO1L1 PE=2 SV=2 (Range: 288-382)
PDB1214 3-77 -15.200 2k0n_A mol:protein length:85 Mediator of RNA polymerase II transcription s
PfamA27U 1-96 -56.100 19  PF15870; B4NAS4.1/572-739; ElonginA binding-protein 1
SCOP175 3-74 -14.500 d1sb0a_ a.12.1.1 (A:) Kix domain of CBP (creb binding protein) {Mouse (Mus musculus) [TaxId: 10090]}
VFDB 11-64 -4.050 VFG1673 (gi:28316253) orf50 - hypothetical protein [Escherichia coli 536]
16 sp|A0PJM3|GORL_HUMAN Putative exonuclease GOR-like protein OS=Homo sapiens GN=REXO1L2P PE=5 SV=2 (Range: 322-408) 87 COG1214 1-84 -18.400 21  [R] KOG1667 Zn2+-binding protein Melusin/RAR1, contains CHORD domain
H.sapiens 1-78 -39.800 76  sp|Q8N1G1|REXO1_HUMAN RNA exonuclease 1 homolog OS=Homo sapiens GN=REXO1 PE=1 SV=3 (Range: 751-1050)
HGM_OVER 1-77 -4.880 PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;
JCSG1214 1-59 -18.900 22  MA16062A 17390872 399968 Purified-2009-03-14
NEW_HUMAN_DOMAINS 1-87 -44.300 75  sp|Q8N1G1|REXO1_HUMAN RNA exonuclease 1 homolog OS=Homo sapiens GN=REXO1 PE=1 SV=3 (Range: 967-1059)
PDB1214 1-59 -17.400 16  2xcm_E mol:protein length:74 RAR1
PfamA27U 1-59 -16.000 20  PF04968.7; A1L2S2_XENLA/152-216; CHORD
SCOP175 9-55 -10.600 27  d1btka_ b.55.1.1 (A:) Bruton`s tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
VFDB 1-51 -9.700 15  VFG1611 (gi:23954293) orf77 - hypothetical protein [Escherichia coli 536]
17 sp|A0PJW6|TM223_HUMAN Transmembrane protein 223 OS=Homo sapiens GN=TMEM223 PE=1 SV=1 (Range: 119-202) 84 COG1214 1-79 -8.810 13  [S] KOG4478 Uncharacterized membrane protein
H.sapiens 1-84 -52.200 100  sp|A0PJW6|TM223_HUMAN(removed signalp:1-27) Transmembrane protein 223 OS=Homo sapiens GN=TMEM223 PE=1 SV=1
HGM_OVER 1-83 -3.670 10  PB011051 Q8A0P0_BACTN/1-227 PB011051; Pfam-B_11051;
JCSG1214 13-72 -5.810 11  SP13193O ZP_02030929.1 412896 Purified-2010-09-29
NEW_HUMAN_DOMAINS 1-79 -16.400 15  sp|Q96B77|TM186_HUMAN Transmembrane protein 186 OS=Homo sapiens GN=TMEM186 PE=2 SV=1 (Range: 125-213)
PDB1214 4-80 -6.420 13  2c3v_A mol:protein length:102 ALPHA-AMYLASE G-6
PfamA27U 1-82 -45.100 58  PF14640.1; TM223_DANRE/69-247; Transmembrane protein 223
SCOP175 2-66 -7.310 18  d1k3ia1 b.1.18.2 (A:538-639) Galactose oxidase, C-terminal domain {Fungi (Fusarium sp.) [TaxId: 29916]}
VFDB 5-83 -5.710 12  VFG1928 (gi:15792870) pflA - paralysed flagellum protein [Campylobacter jejuni NCTC 11168] (VF0114)
18 sp|A0PJX8|TMM82_HUMAN Transmembrane protein 82 OS=Homo sapiens GN=TMEM82 PE=2 SV=2 (Range: 97-285) 189 COG1214 4-186 -7.650 14  [P] KOG2694 Putative zinc transporter
H.sapiens 1-189 -111.000 100  sp|A0PJX8|TMM82_HUMAN Transmembrane protein 82 OS=Homo sapiens GN=TMEM82 PE=2 SV=2
HGM_OVER 21-94 -4.090 16  HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;
JCSG1214 80-187 -6.230 20  TM1156 TM1156 283022 Purified-2001-04-12
NEW_HUMAN_DOMAINS 1-93 -5.140 12  sp|Q6UXG2|K1324_HUMAN UPF0577 protein KIAA1324 OS=Homo sapiens GN=KIAA1324 PE=2 SV=2 (Range: 424-584)
PDB1214 34-111 -7.790 1zu1_A mol:protein length:127 RNA binding protein ZFa
PfamA27U 1-189 -107.000 46  PF15816; H2TT45.1/8-319; Transmembrane protein 82
SCOP175 82-187 -5.920 16  d1qy9a1 d.21.1.2 (A:3-129) Hypothetical protein YddE {Escherichia coli [TaxId: 562]}
VFDB 91-187 -6.460 13  VFG0505 (gi:16764754) sseF - Secretion system effector [Salmonella enterica (serovar typhimurium) LT2] (VF0321)
19 sp|A0PJY2|FEZF1_HUMAN Fez family zinc finger protein 1 OS=Homo sapiens GN=FEZF1 PE=2 SV=1 (Range: 106-243) 138 COG1214 38-133 -5.350 [S] COG4873 Uncharacterized protein conserved in bacteria
H.sapiens 4-138 -15.300 100  sp|A0PJY2|FEZF1_HUMAN Fez family zinc finger protein 1 OS=Homo sapiens GN=FEZF1 PE=2 SV=1
HGM_OVER 47-138 -3.460 11  PB002770 Q744K2_MYCPA/1-559 PB002770; Pfam-B_2770;
JCSG1214 38-128 -6.530 TM1241 TM1241 283106 Selected-2001-10-12
NEW_HUMAN_DOMAINS 2-102 -61.000 30  sp|Q8TBJ5|FEZF2_HUMAN Fez family zinc finger protein 2 OS=Homo sapiens GN=FEZF2 PE=2 SV=2 (Range: 65-221)
PDB1214 19-133 -8.130 13  3omd_A mol:protein length:145 Uncharacterized protein
PfamA27U 22-105 -5.970 PF16798; B4CYJ4.1/9-147; Domain of unknown function (DUF5069 topsan)
SCOP175 33-138 -7.520 12  d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]}
VFDB 78-137 -5.990 16  VFG1576 (gi:23954259) orf42 - hypothetical protein [Escherichia coli 536]
20 sp|A0ZSE6|CC50C_HUMAN Cell cycle control protein 50C OS=Homo sapiens GN=TMEM30C PE=2 SV=2 (Range: 58-113) 56 COG1214 1-49 -7.240 20  [DKT] KOG2952 Cell cycle control protein
H.sapiens 1-49 -20.400 89  sp|A0ZSE6|CC50C_HUMAN Cell cycle control protein 50C OS=Homo sapiens GN=TMEM30C PE=2 SV=2
HGM_OVER 11-41 -2.380 22  PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;
JCSG1214 1-33 -6.480 24  NB1044B NP_342954.1 367620 Purified-2006-07-25
NEW_HUMAN_DOMAINS 14-42 -5.570 25  tr|E9PHF9|E9PHF9_HUMAN Uncharacterized protein OS=Homo sapiens GN=POLE PE=4 SV=1 (Range: 173-256)
PDB1214 33-54 -5.770 2zf9_A mol:protein length:194 ScaE cell-surface anchored scaffoldin protein
PfamA27U 1-49 -7.570 14  PF03381.10; Q759V2_ASHGO/68-365; LEM3 (ligand-effect modulator 3) family / CDC50 family
SCOP175 1-51 -5.620 d1d1na_ b.43.3.1 (A:) Initiation factor IF2/eIF5b, domains 2 and 4 {Bacillus stearothermophilus [TaxId: 1422]}
VFDB 15-55 -3.920 14  VFG0657 (gi:24114257) SF2993 - orf, conserved hypothetical protein [Shigella flexneri (serotype 2a) 301]


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.