FFAS03 list of results B.thetaiotaomicron / PfamA26U

Shows best template from each database, and all templates with significant scores covering different query fragments

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# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|29345411|ref|NP_808914.1| hypothetical protein BT_0001 [Bacteroides thetaiotaomicron VPI-5482] 205 PfamA26U 44-126 -6.030 10 PF05048.8; A0B9A8_METTP/209-441; Periplasmic copper-binding protein (NosD)
2 gi|29345412|ref|NP_808915.1|(removed signal:1-19) hypothetical protein BT_0002 [Bacteroides thetaiotaomicron VPI-5482] 312 PfamA26U 17-211 -6.870 10 PF09365.5; A5GE98_GEOUR/13-224; Conserved hypothetical protein (DUF2461 topsan)
3 gi|29345413|ref|NP_808916.1| hypothetical protein BT_0003 [Bacteroides thetaiotaomicron VPI-5482] 258 PfamA26U 32-116 -12.500 11 PF00216.16; A1VGI8_DESVV/5-94; Bacterial DNA-binding protein
4 gi|29345414|ref|NP_808917.1| hypothetical protein BT_0004 [Bacteroides thetaiotaomicron VPI-5482] 222 PfamA26U 26-159 -7.030 17 PF08664.5; A8FHF3_BACP2/157-299; YcbB domain
5 gi|29345415|ref|NP_808918.1| 30S ribosomal protein S17 BT_0005 [Bacteroides thetaiotaomicron VPI-5482] 178 PfamA26U 108-176 -52.300 55 PF00366.15; RS17_THEMA/8-76; Ribosomal protein S17
6 gi|29345416|ref|NP_808919.1| hypothetical protein BT_0006 [Bacteroides thetaiotaomicron VPI-5482] 148 PfamA26U 4-54 -7.380 13 PF02950.12; CO16A_CONPL/1-79; Conotoxin
7 gi|29345417|ref|NP_808920.1| hypothetical protein BT_0007 [Bacteroides thetaiotaomicron VPI-5482] 130 PfamA26U 21-116 -6.930 13 PF06232.6; Q2HVW6_MEDTR/41-164; Embryo-specific protein 3, (ATS3)
8 gi|29345418|ref|NP_808921.1| hypothetical protein BT_0008 [Bacteroides thetaiotaomicron VPI-5482] 181 PfamA26U 1-163 -25.000 8 PF02474.10; A5A959_9BRAD/14-210; Nodulation protein A (NodA)
26-157 -25.800 10 PF13673.1; Q7V9H3_PROMA/20-139; Acetyltransferase (GNAT) domain
9 gi|29345419|ref|NP_808922.1|(removed signal:1-26) phosphate-binding periplasmic protein precursor, putative ABC transporter BT_0009 [Bacteroides thetaiotaomicron VPI-5482] 343 PfamA26U 16-306 -15.300 11 PF12849.2; A1EKQ7_VIBCH/24-252; PBP superfamily domain
10 gi|29345420|ref|NP_808923.1| hypothetical protein BT_0010 [Bacteroides thetaiotaomicron VPI-5482] 357 PfamA26U 62-174 -6.110 20 PF05836.7; CH16_DROME/29-138; Chorion protein S16
11 gi|29345421|ref|NP_808924.1| hypothetical protein BT_0011 [Bacteroides thetaiotaomicron VPI-5482] 282 PfamA26U 198-279 -7.440 26 PF04998.12; RPB1_CAEEL/820-1416; RNA polymerase Rpb1, domain 5
12 gi|29345422|ref|NP_808925.1|(removed signal:1-34) hypothetical protein BT_0012 [Bacteroides thetaiotaomicron VPI-5482] 354 PfamA26U 2-347 -9.830 7 PF03718.8; P77813_ARTGO/20-620; Glycosyl hydrolase family 49
13 gi|29345423|ref|NP_808926.1| hypothetical protein BT_0013 [Bacteroides thetaiotaomicron VPI-5482] 180 PfamA26U 5-113 -5.800 13 PF02611.10; A8GL49_SERP5/44-265; CDP-diacylglycerol pyrophosphatase
14 gi|29345424|ref|NP_808927.1| two-component system histidine kinase with response regulator receiver domain BT_0014 [Bacteroides thetaiotaomicron VPI-5482] 807 PfamA26U 302-538 -23.000 11 PF03882.9; MUKF_SHIFL/1-440; KicB killing factor
327-391 -24.600 30 PF00512.20; Q55783_SYNY3/185-253; His Kinase A (phospho-acceptor) domain
570-682 -28.200 29 PF00072.19; ZRAR_SALTY/8-118; Response regulator receiver domain
15 gi|29345425|ref|NP_808928.1| rteB, two-component system response regulator BT_0015 [Bacteroides thetaiotaomicron VPI-5482] 432 PfamA26U 4-114 -41.900 30 PF00072.19; ZRAR_SALTY/8-118; Response regulator receiver domain
5-350 -28.200 10 PF08298.6; YEAG_ECOLI/19-380; PrkA AAA domain
127-293 -81.000 46 PF00158.21; Q8E8E7_SHEON/154-320; Sigma-54 interaction domain
388-429 -12.800 31 PF02954.14; Q52200_PSEPU/518-559; Bacterial regulatory protein, Fis family
16 gi|29345426|ref|NP_808929.1| hypothetical protein BT_0016 [Bacteroides thetaiotaomicron VPI-5482] 212 PfamA26U 2-211 -56.800 14 PF09357.5; Q64WJ7_BACFR/81-300; RteC protein
17 gi|29345427|ref|NP_808930.1| hypothetical protein BT_0017 [Bacteroides thetaiotaomicron VPI-5482] 315 PfamA26U 193-313 -6.390 15 PF06936.6; SELS_MOUSE/1-188; Selenoprotein S (SelS)
18 gi|29345428|ref|NP_808931.1| hypothetical protein BT_0018 [Bacteroides thetaiotaomicron VPI-5482] 238 PfamA26U 45-209 -7.140 11 PF12000.3; A4F0P0_9RHOB/24-194; Gkycosyl transferase family 4 group
19 gi|29345429|ref|NP_808932.1| hypothetical protein BT_0019 [Bacteroides thetaiotaomicron VPI-5482] 106 PfamA26U 7-84 -9.200 17 PF06857.6; CITD_ERWCT/2-87; Malonate decarboxylase delta subunit (MdcD)
20 gi|29345430|ref|NP_808933.1| hypothetical protein BT_0020 [Bacteroides thetaiotaomicron VPI-5482] 152 PfamA26U 46-89 -6.570 6 PF09201.5; A7TFS7_VANPO/1-148; SRX

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|29345411\|ref\|NP_808914.1\| hypothetical protein BT_0001 [Bacteroides thetaiotaomicron VPI-5482]`	`205`	`PfamA26U`	`44-126`	`-6.030`	`10`	`PF05048.8; A0B9A8_METTP/209-441; Periplasmic copper-binding protein (NosD)`
2	`gi\|29345412\|ref\|NP_808915.1\|(removed signal:1-19) hypothetical protein BT_0002 [Bacteroides thetaiotaomicron VPI-5482]`	`312`	`PfamA26U`	`17-211`	`-6.870`	`10`	`PF09365.5; A5GE98_GEOUR/13-224; Conserved hypothetical protein (DUF2461 topsan)`
3	`gi\|29345413\|ref\|NP_808916.1\| hypothetical protein BT_0003 [Bacteroides thetaiotaomicron VPI-5482]`	`258`	`PfamA26U`	`32-116`	`-12.500`	`11`	`PF00216.16; A1VGI8_DESVV/5-94; Bacterial DNA-binding protein`
4	`gi\|29345414\|ref\|NP_808917.1\| hypothetical protein BT_0004 [Bacteroides thetaiotaomicron VPI-5482]`	`222`	`PfamA26U`	`26-159`	`-7.030`	`17`	`PF08664.5; A8FHF3_BACP2/157-299; YcbB domain`
5	`gi\|29345415\|ref\|NP_808918.1\| 30S ribosomal protein S17 BT_0005 [Bacteroides thetaiotaomicron VPI-5482]`	`178`	`PfamA26U`	`108-176`	`-52.300`	`55`	`PF00366.15; RS17_THEMA/8-76; Ribosomal protein S17`
6	`gi\|29345416\|ref\|NP_808919.1\| hypothetical protein BT_0006 [Bacteroides thetaiotaomicron VPI-5482]`	`148`	`PfamA26U`	`4-54`	`-7.380`	`13`	`PF02950.12; CO16A_CONPL/1-79; Conotoxin`
7	`gi\|29345417\|ref\|NP_808920.1\| hypothetical protein BT_0007 [Bacteroides thetaiotaomicron VPI-5482]`	`130`	`PfamA26U`	`21-116`	`-6.930`	`13`	`PF06232.6; Q2HVW6_MEDTR/41-164; Embryo-specific protein 3, (ATS3)`
8	`gi\|29345418\|ref\|NP_808921.1\| hypothetical protein BT_0008 [Bacteroides thetaiotaomicron VPI-5482]`	`181`	`PfamA26U`	`1-163`	`-25.000`	`8`	`PF02474.10; A5A959_9BRAD/14-210; Nodulation protein A (NodA)`
				`26-157`	`-25.800`	`10`	`PF13673.1; Q7V9H3_PROMA/20-139; Acetyltransferase (GNAT) domain`
9	`gi\|29345419\|ref\|NP_808922.1\|(removed signal:1-26) phosphate-binding periplasmic protein precursor, putative ABC transporter BT_0009 [Bacteroides thetaiotaomicron VPI-5482]`	`343`	`PfamA26U`	`16-306`	`-15.300`	`11`	`PF12849.2; A1EKQ7_VIBCH/24-252; PBP superfamily domain`
10	`gi\|29345420\|ref\|NP_808923.1\| hypothetical protein BT_0010 [Bacteroides thetaiotaomicron VPI-5482]`	`357`	`PfamA26U`	`62-174`	`-6.110`	`20`	`PF05836.7; CH16_DROME/29-138; Chorion protein S16`
11	`gi\|29345421\|ref\|NP_808924.1\| hypothetical protein BT_0011 [Bacteroides thetaiotaomicron VPI-5482]`	`282`	`PfamA26U`	`198-279`	`-7.440`	`26`	`PF04998.12; RPB1_CAEEL/820-1416; RNA polymerase Rpb1, domain 5`
12	`gi\|29345422\|ref\|NP_808925.1\|(removed signal:1-34) hypothetical protein BT_0012 [Bacteroides thetaiotaomicron VPI-5482]`	`354`	`PfamA26U`	`2-347`	`-9.830`	`7`	`PF03718.8; P77813_ARTGO/20-620; Glycosyl hydrolase family 49`
13	`gi\|29345423\|ref\|NP_808926.1\| hypothetical protein BT_0013 [Bacteroides thetaiotaomicron VPI-5482]`	`180`	`PfamA26U`	`5-113`	`-5.800`	`13`	`PF02611.10; A8GL49_SERP5/44-265; CDP-diacylglycerol pyrophosphatase`
14	`gi\|29345424\|ref\|NP_808927.1\| two-component system histidine kinase with response regulator receiver domain BT_0014 [Bacteroides thetaiotaomicron VPI-5482]`	`807`	`PfamA26U`	`302-538`	`-23.000`	`11`	`PF03882.9; MUKF_SHIFL/1-440; KicB killing factor`
				`327-391`	`-24.600`	`30`	`PF00512.20; Q55783_SYNY3/185-253; His Kinase A (phospho-acceptor) domain`
				`570-682`	`-28.200`	`29`	`PF00072.19; ZRAR_SALTY/8-118; Response regulator receiver domain`
15	`gi\|29345425\|ref\|NP_808928.1\| rteB, two-component system response regulator BT_0015 [Bacteroides thetaiotaomicron VPI-5482]`	`432`	`PfamA26U`	`4-114`	`-41.900`	`30`	`PF00072.19; ZRAR_SALTY/8-118; Response regulator receiver domain`
				`5-350`	`-28.200`	`10`	`PF08298.6; YEAG_ECOLI/19-380; PrkA AAA domain`
				`127-293`	`-81.000`	`46`	`PF00158.21; Q8E8E7_SHEON/154-320; Sigma-54 interaction domain`
				`388-429`	`-12.800`	`31`	`PF02954.14; Q52200_PSEPU/518-559; Bacterial regulatory protein, Fis family`
16	`gi\|29345426\|ref\|NP_808929.1\| hypothetical protein BT_0016 [Bacteroides thetaiotaomicron VPI-5482]`	`212`	`PfamA26U`	`2-211`	`-56.800`	`14`	`PF09357.5; Q64WJ7_BACFR/81-300; RteC protein`
17	`gi\|29345427\|ref\|NP_808930.1\| hypothetical protein BT_0017 [Bacteroides thetaiotaomicron VPI-5482]`	`315`	`PfamA26U`	`193-313`	`-6.390`	`15`	`PF06936.6; SELS_MOUSE/1-188; Selenoprotein S (SelS)`
18	`gi\|29345428\|ref\|NP_808931.1\| hypothetical protein BT_0018 [Bacteroides thetaiotaomicron VPI-5482]`	`238`	`PfamA26U`	`45-209`	`-7.140`	`11`	`PF12000.3; A4F0P0_9RHOB/24-194; Gkycosyl transferase family 4 group`
19	`gi\|29345429\|ref\|NP_808932.1\| hypothetical protein BT_0019 [Bacteroides thetaiotaomicron VPI-5482]`	`106`	`PfamA26U`	`7-84`	`-9.200`	`17`	`PF06857.6; CITD_ERWCT/2-87; Malonate decarboxylase delta subunit (MdcD)`
20	`gi\|29345430\|ref\|NP_808933.1\| hypothetical protein BT_0020 [Bacteroides thetaiotaomicron VPI-5482]`	`152`	`PfamA26U`	`46-89`	`-6.570`	`6`	`PF09201.5; A7TFS7_VANPO/1-148; SRX`