current user: public




Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

Page size:   Sort by score   Show only entries containing string:

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 7012next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2 (Range: 142-330) 189 PfamA26U 81-115 -7.270 17  PF11851.3; Q5XHC0_XENLA/281-429; Domain of unknown function (DUF3371 topsan)
2 sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2 (Range: 362-412) 51 PfamA26U 9-49 -6.110 20  PF08733.5; A6ZSI4_YEAS7/16-364; PalH/RIM21
3 sp|A0AVF1|TTC26_HUMAN Tetratricopeptide repeat protein 26 OS=Homo sapiens GN=TTC26 PE=2 SV=1 (Range: 486-554) 69 PfamA26U 13-64 -6.180 15  PF10820.3; A7MRM7_ENTS8/1-81; Protein of unknown function (DUF2543 topsan)
4 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 1-215) 215 PfamA26U 15-188 -6.370 10  PF03435.13; A1SAY3_SHEAM/14-443; Saccharopine dehydrogenase
5 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 240-290) 51 PfamA26U 20-49 -5.920 10  PF14414.1; A5Z4R0_9FIRM/19-65; A nuclease of the HNH/ENDO VII superfamily with conserved WHH
6 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 311-360) 50 PfamA26U 10-45 -5.700 16  PF01563.11; POLS_SAGV/274-332; Alphavirus E3 glycoprotein
7 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 431-614) 184 PfamA26U 93-165 -7.000 11  PF02381.13; MRAZ_HAEIN/1-76; MraZ protein
8 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 1641-1750) 110 PfamA26U 5-86 -9.560 12  PF07152.7; Q2BN25_9GAMM/15-189; YaeQ protein
9 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 2018-2093) 76 PfamA26U 1-56 -7.620 16  PF00041.16; KALM_CHICK/544-641; Fibronectin type III domain
10 sp|A0AVK6|E2F8_HUMAN Transcription factor E2F8 OS=Homo sapiens GN=E2F8 PE=1 SV=1 (Range: 470-543) 74 PfamA26U 5-52 -6.170 18  PF00719.14; Q7VVV3_BORPE/17-176; Inorganic pyrophosphatase
11 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 117-259) 143 PfamA26U 2-49 -7.310 10  PF06848.6; Q8PSX7_METMA/493-673; Disaggregatase related repeat
12 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 309-401) 93 PfamA26U 19-79 -6.230 14  PF03228.9; Q695S6_9ADEN/1-116; Adenoviral core protein VII
13 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 488-662) 175 PfamA26U 19-140 -7.660 13  PF06371.8; DIA_DROME/59-241; Diaphanous GTPase-binding Domain
14 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 1275-1361) 87 PfamA26U 10-85 -8.700 10  PF09191.5; CD4_DELLE/205-313; CD4, extracellular
15 sp|A0PJM3|GORL_HUMAN Putative exonuclease GOR-like protein OS=Homo sapiens GN=REXO1L2P PE=5 SV=2 (Range: 195-290) 96 PfamA26U 3-70 -14.400 10  PF02172.11; EP300_HUMAN/566-646; KIX domain
16 sp|A0PJM3|GORL_HUMAN Putative exonuclease GOR-like protein OS=Homo sapiens GN=REXO1L2P PE=5 SV=2 (Range: 322-408) 87 PfamA26U 1-59 -17.100 20  PF04968.7; A1L2S2_XENLA/152-216; CHORD
17 sp|A0PJW6|TM223_HUMAN Transmembrane protein 223 OS=Homo sapiens GN=TMEM223 PE=1 SV=1 (Range: 119-202) 84 PfamA26U 1-82 -9.690 14  PF06979.7; Q16J85_AEDAE/77-208; Protein of unknown function (DUF1301 topsan)
18 sp|A0PJX8|TMM82_HUMAN Transmembrane protein 82 OS=Homo sapiens GN=TMEM82 PE=2 SV=2 (Range: 97-285) 189 PfamA26U 85-161 -7.420 16  PF01283.14; A7RG86_NEMVE/1-113; Ribosomal protein S26e
19 sp|A0PJY2|FEZF1_HUMAN Fez family zinc finger protein 1 OS=Homo sapiens GN=FEZF1 PE=2 SV=1 (Range: 106-243) 138 PfamA26U 1-137 -7.810 13  PF07826.6; PURO_METTH/1-202; IMP cyclohydrolase-like protein
20 sp|A0ZSE6|CC50C_HUMAN Cell cycle control protein 50C OS=Homo sapiens GN=TMEM30C PE=2 SV=2 (Range: 58-113) 56 PfamA26U 1-44 -6.530 15  PF03381.10; Q759V2_ASHGO/68-365; LEM3 (ligand-effect modulator 3) family / CDC50 family


FFAS is supported by the NIH grant R01-GM087218-01
5 9 8 1 4   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Locations of visitors to this page
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Plewczynski D, Rychlewski L, Ye Y, Jaroszewski L, Godzik A. Integrated web service for improving alignment quality based on segments comparison. BMC Bioinformatics. 2004 Jul 22;5(1):98.