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Results: 21-40 of 55674< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 601-900) 300 COG0516 1-300 -25.400 40  [T] KOG0705 GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains)
H.sapiens 10-300 -110.000 43  sp|Q96P47|AGAP3_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 OS=Homo sapiens GN=AGAP3 PE=1 SV=2 (Range: 301-600)
HGM_OVER 46-126 -5.040 18  HGC00422 gi|163631722|dbj|BABG01004545.1|2.0 TMP00397;
JCSG0516 34-134 -7.950 12  KN.B21276A.APPL1 BC028599 429652 Purified-2014-04-01
NEW_HUMAN_DOMAINS 5-119 -6.230 21  sp|Q86TW2|ADCK1_HUMAN Uncharacterized aarF domain-containing protein kinase 1 OS=Homo sapiens GN=ADCK1 PE=1 SV=2 (Range: 1-142)
PDB0516 27-116 -11.800 17  3tfm_A mol:protein length:228 Myosin X
74-300 -36.400 93  2rlo_A mol:protein length:128 Centaurin-gamma 1
PfamA30U 33-135 -11.500 10  PF00373.16; Q4T8R8_TETNG/86-414; FERM central domain
79-300 -14.500 12  PF15404.4; C5DN47_LACTC/1032-1239; Pleckstrin homology domain
SCOP206 5-135 -11.300 16  d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}
78-134 -13.500 23  d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]}
VFDB 71-139 -6.230 20  VFG041911(gi:28901187) (vtrA) type III secretion system transcriptional regulator [T3SS2 (VF0409)] [Vibrio parahaemolyticus RIMD 2210633]
22 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 751-1050) 300 COG0516 1-300 -75.300 43  [T] KOG0705 GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains)
H.sapiens 1-300 -92.700 47  sp|A8MT82|CTLFB_HUMAN Putative centaurin-gamma-like family member 11P OS=Homo sapiens GN=CTGLF11P PE=5 SV=2 (Range: 301-600)
HGM_OVER 128-287 -5.150 12  PB028090 gi|167758043|ref|ZP_02430170.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]gi|167663940|gb|EDS08070.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]
JCSG0516 1-170 -18.200 10  KN.B21276A.APPL1 BC028599 429652 Purified-2014-04-01
NEW_HUMAN_DOMAINS 153-227 -6.610 17  sp|O43593|HAIR_HUMAN Protein hairless OS=Homo sapiens GN=HR PE=1 SV=5 (Range: 553-630)
PDB0516 1-177 -19.800 13  4ckg_A mol:protein length:382 ARF-GAP WITH COILED-COIL, ANK REPEAT AND PH D
34-180 -23.400 14  5c6r_A mol:protein length:150 Arf-GAP
153-300 -67.900 36  3t9k_A mol:protein length:390 Arf-GAP with coiled-coil, ANK repeat and PH d
PfamA30U 63-159 -10.100 17  PF00169.27; GRP1_CAEEL/262-380; PH domain
181-292 -36.100 36  PF01412.16; YC8E_SCHPO/2-115; Putative GTPase activating protein for Arf
SCOP206 7-161 -12.300 14  d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}
58-163 -21.700 13  d2q13a2 b.55.1.0 (A:274-378) automated matches {Human (Homo sapiens) [TaxId: 9606]}
178-297 -59.600 40  d2b0oe1 g.45.1.0 (E:423-544) automated matches {Human (Homo sapiens) [TaxId: 9606]}
VFDB 154-294 -6.600 11  VFG000070(gi:16802625) (iap/cwhA) P60 extracellular protein, invasion associated protein Iap [p60 (VF0068)] [Listeria monocytogenes EGD-e]
23 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 901-1192) 292 COG0516 1-252 -89.700 59  [T] KOG0705 GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains)
37-289 -87.900 28  [T] KOG0818 GTPase-activating proteins of the GIT family
H.sapiens 6-280 -110.000 57  sp|Q96P47|AGAP3_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 OS=Homo sapiens GN=AGAP3 PE=1 SV=2 (Range: 601-875)
HGM_OVER 11-72 -4.470 12  HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;
JCSG0516 33-290 -18.900 16  CH2417A Q9BZL4 400611 Selected-2009-01-06
89-288 -22.200 19  KN.B2417A.BCL3 BC064993 429705 Purified-2014-04-10
134-287 -24.000 22  SP18983A NP_253302.1 413233 Purified-2010-05-11
NEW_HUMAN_DOMAINS 191-264 -11.000 18  tr|C9JBQ0|C9JBQ0_HUMAN Uncharacterized protein OS=Homo sapiens GN=ABTB1 PE=4 SV=1 (Range: 1-104)
PDB0516 3-290 -96.300 29  3t9k_A mol:protein length:390 Arf-GAP with coiled-coil, ANK repeat and PH d
27-282 -96.800 27  1dcq_A mol:protein length:278 PYK2-ASSOCIATED PROTEIN BETA
PfamA30U 31-142 -39.400 35  PF01412.16; YC8E_SCHPO/2-115; Putative GTPase activating protein for Arf
158-249 -21.800 23  PF12796.5; A9SB38_PHYPA/440-536; Ankyrin repeats (3 copies)
SCOP206 28-147 -64.100 40  d2b0oe1 g.45.1.0 (E:423-544) automated matches {Human (Homo sapiens) [TaxId: 9606]}
156-286 -28.900 22  d2b0oe2 d.211.1.0 (E:545-687) automated matches {Human (Homo sapiens) [TaxId: 9606]}
VFDB 4-281 -13.000 10  VFG034772(gi:15804603) (espL4) Type III secretion system effector EspL4 [LEE encoded T3SS (SS020)] [Escherichia coli O157:H7 str. EDL933]
70-292 -18.500 13  VFG041253(gi:52840728) (ankC/legA12) Dot/Icm type IV secretion system effector AnkC/LegA12 [Dot/Icm (SS047)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
128-274 -22.000 12  VFG045554(gi:52842345) (legA6) Dot/Icm type IV secretion system effector LegA6 [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
158-283 -25.000 19  VFG041248(gi:52840647) (ankY/legA9) Dot/Icm type IV secretion system effector LegA9/AnkY, ankyrin repeat-containing protein targeting the LCV for autophagy uptake [Dot/Icm (SS047)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
24 sp|P52895|AK1C2_HUMAN Aldo-keto reductase family 1 member C2 OS=Homo sapiens GN=AKR1C2 PE=1 SV=3 323 COG0516 5-323 -131.000 48  [R] KOG1577 Aldo/keto reductase family proteins
H.sapiens 1-323 -135.000 97  sp|Q04828|AK1C1_HUMAN Aldo-keto reductase family 1 member C1 OS=Homo sapiens GN=AKR1C1 PE=1 SV=1
HGM_OVER 148-298 -4.250 13  PB060121 Q64SA7_BACFR/1-251 PB060121; Pfam-B_60121;
JCSG0516 1-323 -135.000 97  MA0313A NP_001344.2 399870 Cloned-2009-03-24
NEW_HUMAN_DOMAINS 1-80 -6.080 12  sp|Q14CZ0|CP072_HUMAN UPF0472 protein C16orf72 OS=Homo sapiens GN=C16orf72 PE=1 SV=1 (Range: 54-148)
PDB0516 1-323 -135.000 97  1mrq_A mol:protein length:323 Aldo-keto reductase family 1 member C1
PfamA30U 16-298 -27.100 17  PF00248.19; Q0CXY3_ASPTN/31-342; Aldo/keto reductase family
SCOP206 5-321 -130.000 48  d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human (Homo sapiens) [TaxId: 9606]}
VFDB 49-280 -5.640 11  VFG013321(gi:16272676) (lpxH) UDP-2,3-diacylglucosamine pyrophosphohydrolase [LOS (CVF494)] [Haemophilus influenzae Rd KW20]
25 sp|P05062|ALDOB_HUMAN Fructose-bisphosphate aldolase B OS=Homo sapiens GN=ALDOB PE=1 SV=2 364 COG0516 1-364 -134.000 69  [G] KOG1557 Fructose-biphosphate aldolase
H.sapiens 1-364 -134.000 69  sp|P04075|ALDOA_HUMAN Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2
HGM_OVER 35-161 -2.520 15  HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066;
JCSG0516 163-356 -5.510 15  TT5108F AACT_C_1_2565 403998 Selected-2009-08-14
NEW_HUMAN_DOMAINS 190-297 -5.350 14  sp|Q9NVU7|SDA1_HUMAN Protein SDA1 homolog OS=Homo sapiens GN=SDAD1 PE=1 SV=3 (Range: 297-408)
PDB0516 2-364 -134.000 96  1fdj_A mol:protein length:363 FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE
PfamA30U 15-364 -132.000 69  PF00274.17; H2LPL6_ORYLA/15-363; Fructose-bisphosphate aldolase class-I
SCOP206 8-346 -128.000 43  d3mbda_ c.1.10.0 (A:) automated matches {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
VFDB 9-287 -5.220 14  VFG002434(gi:53722623) (pilN) type IV pilus inner membrane platform protein PilN [Type IV pili (VF0431)] [Burkholderia pseudomallei K96243]
26 sp|Q9Y2J4|AMOL2_HUMAN Angiomotin-like protein 2 OS=Homo sapiens GN=AMOTL2 PE=1 SV=3 (Range: 1-300) 300 COG0516 24-299 -12.600 [R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)
H.sapiens 1-215 -71.600 43  sp|Q8IY63|AMOL1_HUMAN Angiomotin-like protein 1 OS=Homo sapiens GN=AMOTL1 PE=1 SV=1 (Range: 1-300)
1-267 -65.200 36  sp|Q4VCS5|AMOT_HUMAN Angiomotin OS=Homo sapiens GN=AMOT PE=1 SV=1 (Range: 1-300)
65-300 -34.700 34  sp|Q8IY63|AMOL1_HUMAN Angiomotin-like protein 1 OS=Homo sapiens GN=AMOTL1 PE=1 SV=1 (Range: 151-450)
HGM_OVER 7-71 -5.620 13  HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255;
JCSG0516 1-221 -80.900 89  RF20594A.AMOTL2 BC027824 421189 Purified-2011-03-11
1-300 -12.900 SP17586C NP_439153.1 411588 Selected-2009-11-12
NEW_HUMAN_DOMAINS 3-83 -5.670 12  sp|Q9NXZ1|SAGE1_HUMAN Sarcoma antigen 1 OS=Homo sapiens GN=SAGE1 PE=2 SV=2 (Range: 362-485)
PDB0516 1-170 -8.110 4u0q_A mol:protein length:526 Reticulocyte binding protein 5
PfamA30U 126-299 -10.300 10  PF05934.9; CLCC1_RAT/3-541; Mid-1-related chloride channel (MCLC)
SCOP206 4-75 -6.320 17  d1yfsa1 a.203.1.1 (A:237-453) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) {Aquifex aeolicus [TaxId: 63363]}
VFDB 1-300 -12.900 VFG000337(gi:16272928) (iga1) immunoglobin A1 protease [IgA1 protease (VF0045)] [Haemophilus influenzae Rd KW20]
27 sp|Q9Y2J4|AMOL2_HUMAN Angiomotin-like protein 2 OS=Homo sapiens GN=AMOTL2 PE=1 SV=3 (Range: 151-450) 300 COG0516 60-300 -10.700 11  [S] KOG3270 Uncharacterized conserved protein
99-300 -12.300 10  [UD] KOG2218 ER to golgi transport protein/RAD50-interacting protein 1
181-300 -16.200 [Z] KOG1853 LIS1-interacting protein NUDE
H.sapiens 1-246 -28.800 21  sp|Q4VCS5|AMOT_HUMAN Angiomotin OS=Homo sapiens GN=AMOT PE=1 SV=1 (Range: 151-450)
165-300 -26.700 44  sp|Q8IY63|AMOL1_HUMAN Angiomotin-like protein 1 OS=Homo sapiens GN=AMOTL1 PE=1 SV=1 (Range: 301-600)
HGM_OVER 189-300 -7.780 12  PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8]
JCSG0516 1-300 -36.500 81  RF20594A.AMOTL2 BC027824 421189 Purified-2011-03-11
NEW_HUMAN_DOMAINS 165-300 -11.600 14  sp|Q68CZ6|HAUS3_HUMAN HAUS augmin-like complex subunit 3 OS=Homo sapiens GN=HAUS3 PE=1 SV=1 (Range: 442-603)
PDB0516 186-300 -14.600 14  3iox_A mol:protein length:497 AgI/II
PfamA30U 154-299 -16.100 PF10168.7; I3KZS6_ORENI/8-718; Nuclear pore component
SCOP206 181-298 -10.400 14  d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
VFDB 1-300 -12.800 VFG000337(gi:16272928) (iga1) immunoglobin A1 protease [IgA1 protease (VF0045)] [Haemophilus influenzae Rd KW20]
158-300 -15.200 13  VFG017038(gi:15604838) (incA) Inclusion Membrane Protein A [T3SS (SS001)] [Chlamydia trachomatis D/UW-3/CX]
28 sp|Q9Y2J4|AMOL2_HUMAN Angiomotin-like protein 2 OS=Homo sapiens GN=AMOTL2 PE=1 SV=3 (Range: 301-600) 300 COG0516 1-296 -22.900 10  [S] COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain
H.sapiens 1-300 -26.300 13  sp|O15049|N4BP3_HUMAN NEDD4-binding protein 3 OS=Homo sapiens GN=N4BP3 PE=1 SV=3
HGM_OVER 28-143 -7.010 10  PB019278 gi|154508461|ref|ZP_02044103.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]gi|153798095|gb|EDN80515.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]
JCSG0516 1-300 -33.400 92  RF20594A.AMOTL2 BC027824 421189 Purified-2011-03-11
NEW_HUMAN_DOMAINS 2-68 -7.040 19  tr|B5MDG7|B5MDG7_HUMAN Uncharacterized protein OS=Homo sapiens GN=HMG20B PE=4 SV=2 (Range: 199-286)
PDB0516 26-297 -20.200 1jch_A mol:protein length:551 COLICIN E3
PfamA30U 5-300 -18.500 11  PF07058.9; I1Q190_ORYGL/30-591; Microtubule-associated protein 70
40-300 -20.800 11  PF15070.4; W5MC41_LEPOC/402-1036; Putative golgin subfamily A member 2-like protein 5
SCOP206 25-104 -5.360 10  d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II, PAC) {Streptococcus mutans [TaxId: 1309]}
VFDB 2-300 -20.100 15  VFG000950(gi:21911263) (emm) M protein type 3 [M protein (VF0242)] [Streptococcus pyogenes MGAS315]
29 sp|Q9Y2J4|AMOL2_HUMAN Angiomotin-like protein 2 OS=Homo sapiens GN=AMOTL2 PE=1 SV=3 (Range: 451-750) 300 COG0516 1-299 -12.300 11  [M] COG3264 Small-conductance mechanosensitive channel
2-209 -22.400 13  [S] COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain
2-245 -17.900 10  [YU] KOG4460 Nuclear pore complex, Nup88/rNup84 component
H.sapiens 28-209 -25.700 60  sp|Q8IY63|AMOL1_HUMAN Angiomotin-like protein 1 OS=Homo sapiens GN=AMOTL1 PE=1 SV=1 (Range: 601-900)
163-297 -24.500 100  sp|Q9Y2J4|AMOL2_HUMAN Angiomotin-like protein 2 OS=Homo sapiens GN=AMOTL2 PE=1 SV=3 (Range: 601-779)
HGM_OVER 21-199 -8.850 10  PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8]
JCSG0516 1-285 -28.700 84  RF20594A.AMOTL2 BC027824 421189 Purified-2011-03-11
NEW_HUMAN_DOMAINS 252-300 -10.700 12  sp|Q92750|TAF4B_HUMAN Transcription initiation factor TFIID subunit 4B OS=Homo sapiens GN=TAF4B PE=1 SV=2 (Range: 450-595)
PDB0516 1-240 -18.600 1jch_A mol:protein length:551 COLICIN E3
215-300 -14.200 14  4dt5_A mol:protein length:143 Antifreeze protein
PfamA30U 1-255 -12.300 PF13779.4; D7A9C0_STAND/55-942; Domain of unknown function (DUF4175 topsan)
2-209 -20.100 11  PF09787.7; W4YU02_STRPU/423-727; Golgin subfamily A member 5
34-209 -27.600 67  PF12240.6; W5ML99_LEPOC/616-822; Angiomotin C terminal
245-300 -12.300 14  PF12815.5; SPT5_NEUCR/864-951; Spt5 C-terminal nonapeptide repeat binding Spt4
SCOP206 13-231 -6.770 d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
VFDB 1-297 -18.600 VFG000337(gi:16272928) (iga1) immunoglobin A1 protease [IgA1 protease (VF0045)] [Haemophilus influenzae Rd KW20]
30 sp|Q9Y2J4|AMOL2_HUMAN Angiomotin-like protein 2 OS=Homo sapiens GN=AMOTL2 PE=1 SV=3 (Range: 601-779) 179 COG0516 9-62 -8.540 22  [D] COG2919 Septum formation initiator
H.sapiens 25-179 -42.500 36  sp|Q8IY63|AMOL1_HUMAN Angiomotin-like protein 1 OS=Homo sapiens GN=AMOTL1 PE=1 SV=1 (Range: 751-956)
HGM_OVER 13-52 -5.880 10  PB012472 gi|62259485|gb|AAX77857.1| unknown protein [synthetic construct]
JCSG0516 1-179 -22.600 74  RF20594A.AMOTL2 BC027824 421189 Purified-2011-03-11
NEW_HUMAN_DOMAINS 13-47 -7.440 25  sp|Q5T124|UBX11_HUMAN UBX domain-containing protein 11 OS=Homo sapiens GN=UBXN11 PE=2 SV=2 (Range: 27-108)
PDB0516 9-63 -9.490 14  2yko_A mol:protein length:233 LINE-1 ORF1P
PfamA30U 12-83 -17.800 52  PF12240.6; W5ML99_LEPOC/616-822; Angiomotin C terminal
SCOP206 28-95 -5.740 11  d3dnja_ d.45.1.2 (A:) automated matches {Caulobacter vibrioides [TaxId: 155892]}
VFDB 6-68 -6.480 20  VFG045501(gi:52841161) (ravI) Dot/Icm type IV secretion system effector RavI [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
31 sp|O43827|ANGL7_HUMAN(removed signalp:1-26) Angiopoietin-related protein 7 OS=Homo sapiens GN=ANGPTL7 PE=1 SV=1 320 COG0516 4-319 -84.100 32  [R] KOG2579 Ficolin and related extracellular proteins
H.sapiens 1-318 -94.500 33  sp|Q15389|ANGP1_HUMAN(removed signalp:1-19) Angiopoietin-1 OS=Homo sapiens GN=ANGPT1 PE=1 SV=2
HGM_OVER 138-271 -2.380 12  PB002770 Q744K2_MYCPA/1-559 PB002770; Pfam-B_2770;
JCSG0516 60-243 -11.600 18  SP17431B ZP_02043375.1 406564 Selected-2009-11-12
NEW_HUMAN_DOMAINS 145-276 -6.060 13  sp|Q9NZQ8|TRPM5_HUMAN Transient receptor potential cation channel subfamily M member 5 OS=Homo sapiens GN=TRPM5 PE=1 SV=1 (Range: 521-665)
PDB0516 1-318 -86.700 33  1ei3_B mol:protein length:464 FIBRINOGEN
102-318 -97.100 45  4jzc_A mol:protein length:218 Angiopoietin-2
PfamA30U 102-316 -85.900 39  PF00147.16; TENA_HUMAN/1980-2189; Fibrinogen beta and gamma chains, C-terminal globular domain
SCOP206 102-318 -97.100 45  d4jzca_ d.171.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
VFDB 110-309 -6.050 12  VFG001361(gi:15900059) (pspA) pneumococcal surface protein A [PspA (VF0152)] [Streptococcus pneumoniae TIGR4]
32 sp|Q8N6D5|ANR29_HUMAN Ankyrin repeat domain-containing protein 29 OS=Homo sapiens GN=ANKRD29 PE=2 SV=2 301 COG0516 22-298 -65.000 17  [I] KOG0817 Acyl-CoA-binding protein
36-265 -71.900 27  [O] KOG4412 26S proteasome regulatory complex, subunit PSMD10
H.sapiens 4-301 -89.100 30  sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3 (Range: 301-600)
HGM_OVER 109-258 -1.940 10  PB144506 _Gut.Meta.Jp.0101058_ gi|162866171|dbj|BABB01003836.1||1 (- 121:946~0 complete)
JCSG0516 1-300 -71.500 21  RF.A2417A.NOTCH1 BC138441 424711 Purified-2012-02-21
42-268 -71.800 23  SP2417A YP_001714229.1 406340 Purified-2010-09-29
NEW_HUMAN_DOMAINS 112-235 -24.900 19  tr|C9JBQ0|C9JBQ0_HUMAN Uncharacterized protein OS=Homo sapiens GN=ABTB1 PE=4 SV=1 (Range: 1-104)
PDB0516 1-301 -79.900 26  4rly_A mol:protein length:329 Nav1.2 - AnkB chimera
PfamA30U 14-174 -17.400 13  PF06128.9; Q326U4_SHIDS/191-482; Shigella flexneri OspC protein
149-241 -39.500 24  PF12796.5; A9SB38_PHYPA/440-536; Ankyrin repeats (3 copies)
242-274 -11.300 24  PF00023.28; AKRP_ARATH/292-324; Ankyrin repeat
SCOP206 1-297 -75.000 22  d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
38-268 -78.300 26  d3b95a1 d.211.1.0 (A:734-967) automated matches {Human (Homo sapiens) [TaxId: 9606]}
VFDB 1-301 -70.600 20  VFG041257(gi:52840932) (ankN/ankX/legA8) Dot/Icm Type IV secretion system effector AnkX ankyrin repeat-containing protein, phosphoryl transferase [Dot/Icm (SS047)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
33 sp|P56377|AP1S2_HUMAN AP-1 complex subunit sigma-2 OS=Homo sapiens GN=AP1S2 PE=1 SV=1 157 COG0516 1-141 -89.300 46  [U] KOG0935 Clathrin adaptor complex, small subunit
H.sapiens 1-143 -89.300 36  sp|Q9Y587|AP4S1_HUMAN AP-4 complex subunit sigma-1 OS=Homo sapiens GN=AP4S1 PE=2 SV=1
HGM_OVER 59-157 -3.100 16  PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033;
JCSG0516 1-132 -6.520 15  FB10616F YP_614313.1 375056 Purified-2008-07-10
NEW_HUMAN_DOMAINS 90-116 -5.790 42  sp|O95405|ZFYV9_HUMAN Zinc finger FYVE domain-containing protein 9 OS=Homo sapiens GN=ZFYVE9 PE=1 SV=2 (Range: 1-78)
PDB0516 1-141 -89.200 46  2jkr_I mol:protein length:142 AP-2 COMPLEX SUBUNIT SIGMA-1
PfamA30U 1-139 -57.800 20  PF01217.18; COPZ1_BOVIN/12-153; Clathrin adaptor complex small chain
SCOP206 1-141 -89.200 46  d2jkri_ d.110.4.2 (I:) Sigma2 adaptin (clathrin coat assembly protein AP17) {Mouse (Mus musculus) [TaxId: 10090]}
VFDB 49-103 -6.070 VFG000199(gi:15596901) (pcrR) type III secretion system regulatory protein PcrR [TTSS (VF0083)] [Pseudomonas aeruginosa PAO1]
34 sp|Q6Q788|APOA5_HUMAN(removed signalp:1-23) Apolipoprotein A-V OS=Homo sapiens GN=APOA5 PE=1 SV=1 343 COG0516 1-342 -13.800 [D] COG5185 Protein involved in chromosome segregation, interacts with SMC proteins
26-290 -19.400 [S] KOG4744 Uncharacterized conserved protein
81-337 -14.500 [R] KOG4331 Polytopic membrane protein Prominin
H.sapiens 1-342 -30.500 24  sp|P06727|APOA4_HUMAN(removed signalp:1-20) Apolipoprotein A-IV OS=Homo sapiens GN=APOA4 PE=1 SV=3
HGM_OVER 227-333 -6.030 10  PB019278 gi|154508461|ref|ZP_02044103.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]gi|153798095|gb|EDN80515.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]
JCSG0516 2-341 -23.200 10  CC20746A NP_420296.1 423187 Purified-2011-04-15
NEW_HUMAN_DOMAINS 8-342 -13.800 11  sp|Q9P1Z9|CI174_HUMAN Uncharacterized protein C9orf174 OS=Homo sapiens GN=C9orf174 PE=1 SV=2 (Range: 319-675)
PDB0516 5-343 -14.600 11  1yvl_A mol:protein length:683 Signal transducer and activator of transcript
12-303 -28.700 12  2l7b_A mol:protein length:307 Apolipoprotein E
55-315 -33.200 26  3s84_A mol:protein length:273 Apolipoprotein A-IV
PfamA30U 2-341 -13.900 12  PF12128.6; Q8EAA0_SHEON/8-1195; Protein of unknown function (DUF3584 topsan)
25-277 -15.800 11  PF10168.7; I3KZS6_ORENI/8-718; Nuclear pore component
32-236 -26.300 20  PF01442.16; L9KQJ6_TUPCH/68-256; Apolipoprotein A1/A4/E domain
SCOP206 96-239 -20.800 14  d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]}
VFDB 2-310 -14.500 VFG041334(gi:52842631) (lem25) Dot/Icm type IV secretion system effector Lem25 [Dot/Icm (SS047)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
76-341 -14.600 VFG012362(gi:15804215) (espB) Type III secretion system translocator protein EspB, pore protein [TTSS (VF0191)] [Escherichia coli O157:H7 str. EDL933]
35 sp|P15514|AREG_HUMAN(removed signalp:1-26) Amphiregulin OS=Homo sapiens GN=AREG PE=1 SV=2 226 COG0516 83-156 -10.700 13  [W] KOG4004 Matricellular protein Osteonectin/SPARC/BM-40
126-226 -11.900 11  [S] COG4640 Predicted membrane protein
H.sapiens 4-224 -42.600 14  sp|P56975|NRG3_HUMAN Pro-neuregulin-3, membrane-bound isoform OS=Homo sapiens GN=NRG3 PE=1 SV=1 (Range: 151-450)
33-221 -49.100 23  sp|Q99075|HBEGF_HUMAN(removed signalp:1-23) Proheparin-binding EGF-like growth factor OS=Homo sapiens GN=HBEGF PE=1 SV=1
HGM_OVER 120-224 -5.140 11  PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;
JCSG0516 1-158 -9.880 12  HN13881D XM_594044 423403 Selected-2010-12-07
89-158 -11.600 14  HN13881A NM_016256.3 423397 Cloned-2013-04-04
125-203 -9.700 17  SARS054 29837497 355921 PDB-2005-07-18
NEW_HUMAN_DOMAINS 128-204 -12.500 12  tr|E9PFX4|E9PFX4_HUMAN Uncharacterized protein OS=Homo sapiens GN=LTK PE=4 SV=1 (Range: 276-395)
PDB0516 3-159 -16.400 4cbz_A mol:protein length:312 PROTEIN JAGGED-1
88-159 -28.000 36  1xdt_R mol:protein length:79 HEPARIN-BINDING EPIDERMAL GROWTH FACTOR
106-217 -10.300 15  4ui9_S mol:protein length:447 F-BOX ONLY PROTEIN 5
PfamA30U 119-223 -15.000 12  PF13908.4; I3IYU5_ORENI/55-228; Wnt and FGF inhibitory regulator
SCOP206 115-162 -22.800 27  d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}
VFDB 165-226 -7.350 11  VFG036884(gi:15676785) (pilK) pilin-like protein may involving in pseudopilus formation [Type IV pili (CVF189)] [Neisseria meningitidis MC58]
36 sp|Q8N8L6|ARL10_HUMAN(removed signalp:1-21) ADP-ribosylation factor-like protein 10 OS=Homo sapiens GN=ARL10 PE=2 SV=1 223 COG0516 8-188 -12.500 14  [R] COG1163 Predicted GTPase
40-220 -81.600 30  [U] KOG0070 GTP-binding ADP-ribosylation factor Arf1
H.sapiens 40-223 -83.100 34  sp|Q6T311|ARL9_HUMAN ADP-ribosylation factor-like protein 9 OS=Homo sapiens GN=ARL9 PE=2 SV=1
HGM_OVER 12-167 -6.240 11  PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;
JCSG0516 16-189 -10.600 17  NS0527C SSUI_28JUL04_CONTIG260_REVISED_GENE1372 380634 Purified-2007-10-29
58-218 -31.400 14  KN.B21262A.RAN BC004272 429589 Purified-2014-04-01
NEW_HUMAN_DOMAINS 44-185 -9.820 10  sp|Q8IVG5|SAM9L_HUMAN Sterile alpha motif domain-containing protein 9-like OS=Homo sapiens GN=SAMD9L PE=1 SV=2 (Range: 687-863)
PDB0516 38-220 -81.500 30  3aq4_A mol:protein length:184 ADP-ribosylation factor 1
PfamA30U 53-217 -77.800 33  PF00025.19; TRI23_RAT/390-564; ADP-ribosylation factor family
SCOP206 57-217 -76.500 34  d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
VFDB 57-208 -14.000 19  VFG001859(gi:52842863) (feoB) ferrous iron transporter B [FeoAB (VF0160)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
37 sp|Q8TBH0|ARRD2_HUMAN Arrestin domain-containing protein 2 OS=Homo sapiens GN=ARRDC2 PE=2 SV=2 407 COG0516 1-406 -98.600 53  [R] KOG3780 Thioredoxin binding protein TBP-2/VDUP1
H.sapiens 1-406 -98.600 53  sp|Q96B67|ARRD3_HUMAN Arrestin domain-containing protein 3 OS=Homo sapiens GN=ARRDC3 PE=1 SV=1
HGM_OVER 179-300 -5.540 HGC01213 gi|163579070|dbj|BABE01006032.1|2.0 TMP01709;
JCSG0516 3-223 -7.560 11  SP13338D ZP_02032840.1 412955 Selected-2009-11-12
NEW_HUMAN_DOMAINS 299-390 -4.540 11  tr|E9PBY2|E9PBY2_HUMAN Uncharacterized protein OS=Homo sapiens GN=DAZ2 PE=4 SV=1 (Range: 553-654)
PDB0516 2-322 -91.900 36  4ll1_A mol:protein length:315 Thioredoxin-interacting protein
3-375 -64.000 14  1jsy_A mol:protein length:418 Bovine arrestin-2 (full length)
PfamA30U 4-289 -52.300 13  PF03643.13; VP26A_HUMAN/8-283; Vacuolar protein sorting-associated protein 26
SCOP206 164-306 -35.700 18  d3ugua2 b.1.18.11 (A:183-360) automated matches {Cow (Bos taurus) [TaxId: 9913]}
VFDB 5-138 -5.780 11  VFG000890(gi:26249418) (papG) P pilus tip adhesin PapG [P fimbriae (VF0220)] [Escherichia coli CFT073]
38 sp|Q9NR48|ASH1L_HUMAN Probable histone-lysine N-methyltransferase ASH1L OS=Homo sapiens GN=ASH1L PE=1 SV=2 (Range: 1-300) 300 COG0516 12-279 -7.150 10  [R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)
H.sapiens 1-256 -62.000 26  sp|Q9Y6X0|SETBP_HUMAN SET-binding protein OS=Homo sapiens GN=SETBP1 PE=1 SV=3 (Range: 1-300)
151-299 -31.500 100  sp|Q9NR48|ASH1L_HUMAN Probable histone-lysine N-methyltransferase ASH1L OS=Homo sapiens GN=ASH1L PE=1 SV=2 (Range: 151-450)
HGM_OVER 1-107 -4.360 13  HGC01215 gi|162843249|dbj|BABA01001460.1|3.0 TMP01713;
JCSG0516 67-281 -8.760 SP17978A NP_371959.1 413583 Selected-2009-11-12
NEW_HUMAN_DOMAINS 66-112 -6.940 21  sp|Q96A73|K1191_HUMAN UPF0498 protein KIAA1191 OS=Homo sapiens GN=KIAA1191 PE=1 SV=1 (Range: 1-60)
PDB0516 64-98 -7.890 17  4m6t_A mol:protein length:183 RNA polymerase II-associated factor 1 homolog
PfamA30U 68-107 -7.090 31  PF06464.9; A0JM39_XENTR/9-128; DMAP1-binding Domain
SCOP206 64-108 -6.910 17  d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
VFDB 54-280 -7.210 VFG001279(gi:21282245) (sdrC) Ser-Asp rich fibrinogen-binding bone sialoprotein-binding protein [SDr (VF0019)] [Staphylococcus aureus subsp. aureus MW2]
39 sp|Q9NR48|ASH1L_HUMAN Probable histone-lysine N-methyltransferase ASH1L OS=Homo sapiens GN=ASH1L PE=1 SV=2 (Range: 151-450) 300 COG0516 3-293 -7.820 [R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)
H.sapiens 1-149 -31.400 100  sp|Q9NR48|ASH1L_HUMAN Probable histone-lysine N-methyltransferase ASH1L OS=Homo sapiens GN=ASH1L PE=1 SV=2 (Range: 1-300)
151-300 -37.100 100  sp|Q9NR48|ASH1L_HUMAN Probable histone-lysine N-methyltransferase ASH1L OS=Homo sapiens GN=ASH1L PE=1 SV=2 (Range: 301-600)
HGM_OVER 1-67 -1.790 PB030138 Q7MX14_PORGI/1-113 PB030138; Pfam-B_30138;
JCSG0516 8-191 -8.130 SP2363E ZP_02069969.1 409482 Purified-2010-09-29
NEW_HUMAN_DOMAINS 1-49 -5.230 sp|Q9HAP2|MLXIP_HUMAN MLX-interacting protein OS=Homo sapiens GN=MLXIP PE=1 SV=2 (Range: 414-523)
PDB0516 1-32 -5.720 18  2ka6_B mol:protein length:45 Signal transducer and activator of transcript
PfamA30U 1-45 -6.760 15  PF00997.16; E2QXF8_CANLF/23-184; Kappa casein
SCOP206 77-255 -4.720 14  d1lm7a_ d.211.2.1 (A:) Desmoplakin intermediate filament-binding domains {Human (Homo sapiens) [TaxId: 9606]}
VFDB 2-63 -4.410 VFG041266(gi:52841378) (cegC3) Dot/Icm type IV secretion system effector CegC3 [Dot/Icm (SS047)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
40 sp|Q9NR48|ASH1L_HUMAN Probable histone-lysine N-methyltransferase ASH1L OS=Homo sapiens GN=ASH1L PE=1 SV=2 (Range: 301-600) 300 COG0516 1-290 -18.500 [R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)
H.sapiens 1-150 -37.100 100  sp|Q9NR48|ASH1L_HUMAN Probable histone-lysine N-methyltransferase ASH1L OS=Homo sapiens GN=ASH1L PE=1 SV=2 (Range: 151-450)
151-298 -33.200 100  sp|Q9NR48|ASH1L_HUMAN Probable histone-lysine N-methyltransferase ASH1L OS=Homo sapiens GN=ASH1L PE=1 SV=2 (Range: 451-750)
HGM_OVER 246-300 -3.950 HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255;
JCSG0516 1-298 -17.800 SP17586C NP_439153.1 411588 Selected-2009-11-12
193-282 -22.000 14  SP16857B ZP_02035441.1 407193 Purified-2010-09-29
NEW_HUMAN_DOMAINS 198-282 -12.100 14  sp|Q92750|TAF4B_HUMAN Transcription initiation factor TFIID subunit 4B OS=Homo sapiens GN=TAF4B PE=1 SV=2 (Range: 450-595)
PDB0516 244-297 -9.260 3ghp_A mol:protein length:227 Cellulosomal scaffoldin adaptor protein B
PfamA30U 38-295 -11.400 PF11725.6; Q887C9_PSESM/17-1794; Pathogenicity factor
106-282 -13.300 11  PF05934.9; CLCC1_RAT/3-541; Mid-1-related chloride channel (MCLC)
196-282 -15.200 14  PF05887.9; PAR1_TRYBB/1-143; Procyclic acidic repetitive protein (PARP)
SCOP206 191-282 -3.820 d2b5lc_ d.384.1.1 (C:) SV5-V core {Simian virus 5 [TaxId: 11207]}
VFDB 1-298 -17.800 VFG000337(gi:16272928) (iga1) immunoglobin A1 protease [IgA1 protease (VF0045)] [Haemophilus influenzae Rd KW20]


FFAS is supported by the NIH grant R01-GM087218-01
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Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Slabinski L, Jaroszewski L, Rychlewski L, Wilson IA, Lesley SA, Godzik A. XtalPred: a web server for prediction of protein crystallizability. Bioinformatics. 2007 Dec 15;23(24):3403-5. Epub 2007 Oct 5.