FFAS03 list of results M.pneumoniae / PfamA26U

Shows best template from each database, and all templates with significant scores covering different query fragments

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# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|13507740|ref|NP_109689.1| DNA polymerase III beta subunit MPN001 [Mycoplasma pneumoniae M129] 380 PfamA26U 1-121 -45.300 19 PF00712.14; DPO3B_BACSU/1-127; DNA polymerase III beta subunit, N-terminal domain
135-256 -39.800 13 PF02767.11; DPO3B_PROMI/129-244; DNA polymerase III beta subunit, central domain
258-380 -54.000 23 PF02768.10; DPO3B_BACSU/253-376; DNA polymerase III beta subunit, C-terminal domain
2 gi|13507741|ref|NP_109690.1| DnaJ domain-containing protein MPN002 [Mycoplasma pneumoniae M129] 309 PfamA26U 2-61 -34.900 43 PF00226.26; Q22028_CAEEL/17-79; DnaJ domain
147-217 -13.600 7 PF00684.14; DNAJ1_CORGL/147-211; DnaJ central domain
182-282 -11.300 16 PF01556.13; A2FIH5_TRIVA/258-337; DnaJ C terminal domain
3 gi|13507742|ref|NP_109691.1| DNA gyrase subunit B MPN003 [Mycoplasma pneumoniae M129] 650 PfamA26U 43-143 -9.890 20 PF13589.1; A5G4D8_GEOUR/22-165; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
228-408 -75.700 40 PF00204.20; Q9R3E4_ACISP/115-285; DNA gyrase B
576-639 -45.700 57 PF00986.16; Q6MRR8_BDEBA/731-795; DNA gyrase B subunit, carboxyl terminus
4 gi|13507743|ref|NP_109692.1| DNA gyrase subunit A MPN004 [Mycoplasma pneumoniae M129] 839 PfamA26U 44-474 -94.600 28 PF00521.15; A1ZXC5_9BACT/29-447; DNA gyrase/topoisomerase IV, subunit A
620-665 -10.900 28 PF03989.8; GYRA_HAEIN/641-686; DNA gyrase C-terminal domain, beta-propeller
5 gi|13507744|ref|NP_109693.1| seryl-tRNA synthetase MPN005 [Mycoplasma pneumoniae M129] 420 PfamA26U 1-104 -34.800 22 PF02403.17; Q8GE42_HELMO/1-107; Seryl-tRNA synthetase N-terminal domain
169-338 -96.400 49 PF00587.20; SYS_BACSU/173-344; tRNA synthetase class II core domain (G, H, P, S and T)
6 gi|13507745|ref|NP_109694.1| thymidylate kinase MPN006 [Mycoplasma pneumoniae M129] 210 PfamA26U 9-197 -87.800 34 PF02223.12; KTHY_BACSU/8-199; Thymidylate kinase
7 gi|13507746|ref|NP_109695.1| DNA polymerase III subunit delta' MPN007 [Mycoplasma pneumoniae M129] 253 PfamA26U 2-143 -70.700 27 PF13177.1; B3XQR6_LACRE/12-172; DNA polymerase III, delta subunit
5-185 -30.800 11 PF06068.8; Q9GZH2_CAEEL/17-408; TIP49 C-terminus
5-218 -11.300 7 PF05621.6; Q48383_KLEAE/1-302; Bacterial TniB protein
8 gi|13507747|ref|NP_109696.1| tRNA modification GTPase TrmE MPN008 [Mycoplasma pneumoniae M129] 442 PfamA26U 6-121 -54.500 34 PF10396.4; MNME_PSEA6/12-126; GTP-binding protein TrmE N-terminus
178-420 -18.100 12 PF05049.8; Q9DCE9_MOUSE/50-412; Interferon-inducible GTPase (IIGP)
219-332 -38.800 29 PF01926.18; DER_CHLCV/3-119; 50S ribosome-binding GTPase
368-439 -28.500 15 PF12631.2; B7IBI3_ACIB5/331-403; Catalytic cysteine-containing C-terminus of GTPase, MnmE
9 gi|13507748|ref|NP_109697.1| hydrolase MPN009 [Mycoplasma pneumoniae M129] 261 PfamA26U 4-260 -96.200 29 PF01026.16; Y454_HAEIN/4-256; TatD related DNase
10 gi|13507749|ref|NP_109698.1| hypothetical protein MPN010 [Mycoplasma pneumoniae M129] 131 PfamA26U 38-130 -13.500 44 PF01519.11; Y145_MYCPN/37-164; Protein of unknown function DUF16 topsan
11 gi|13507750|ref|NP_109699.1|(removed signal:1-26) hypothetical protein MPN011 [Mycoplasma pneumoniae M129] 205 PfamA26U 1-82 -34.500 32 PF00938.12; Y646_MYCPN/28-114; Lipoprotein
12 gi|13507751|ref|NP_109700.1|(removed signal:1-21) hypothetical protein MPN012 [Mycoplasma pneumoniae M129] 214 PfamA26U 1-88 -37.400 33 PF00938.12; Y646_MYCPN/28-114; Lipoprotein
13 gi|13507752|ref|NP_109701.1| hypothetical protein MPN013 [Mycoplasma pneumoniae M129] 257 PfamA26U 27-144 -15.500 9 PF04929.7; VG59_EHV2/8-414; Herpes DNA replication accessory factor
42-115 -26.400 17 PF02948.10; Q2HYD7_CHAVD/8-189; Amelogenin
166-256 -16.000 19 PF01519.11; Y145_MYCPN/37-164; Protein of unknown function DUF16 topsan
14 gi|13507753|ref|NP_109702.1| hypothetical protein MPN014 [Mycoplasma pneumoniae M129] 212 PfamA26U 2-101 -43.300 15 PF08275.6; Q64P92_BACFR/123-254; DNA primase catalytic core, N-terminal domain
108-195 -42.300 27 PF13155.1; C5EJG0_9FIRM/258-343; Toprim-like
15 gi|13507754|ref|NP_109703.1| hypothetical protein MPN015 [Mycoplasma pneumoniae M129] 285 PfamA26U 4-273 -48.500 12 PF05770.6; Q9AYJ2_ORYSJ/16-320; Inositol 1, 3, 4-trisphosphate 5/6-kinase
92-271 -65.900 17 PF08443.6; RIMK_HAEIN/105-293; RimK-like ATP-grasp domain
16 gi|13507755|ref|NP_109704.1| ribosomal S6 modification protein MPN016 [Mycoplasma pneumoniae M129] 288 PfamA26U 12-287 -43.800 10 PF05770.6; Q9AYJ2_ORYSJ/16-320; Inositol 1, 3, 4-trisphosphate 5/6-kinase
90-287 -67.500 25 PF08443.6; RIMK_HAEIN/105-293; RimK-like ATP-grasp domain
17 gi|13507756|ref|NP_109705.1| 5,10-methylene-tetrahydrofolate dehydrogenase MPN017 [Mycoplasma pneumoniae M129] 269 PfamA26U 2-111 -56.300 30 PF00763.18; FOLD_SHIFL/4-121; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
114-265 -77.000 25 PF02882.14; Q9ZVI8_ARATH/182-349; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
18 gi|13507757|ref|NP_109706.1|(removed signal:1-25) transport ATP-binding protein MPN018 [Mycoplasma pneumoniae M129] 598 PfamA26U 8-249 -15.800 8 PF13748.1; B6R989_9RHOB/9-243; ABC transporter transmembrane region
168-589 -25.600 10 PF09818.4; Q2C6W1_9GAMM/1-438; Predicted ATPase of the ABC class
19 gi|13507758|ref|NP_109707.1| transport ATP-binding protein MPN019 [Mycoplasma pneumoniae M129] 634 PfamA26U 43-329 -31.400 7 PF13748.1; B6R989_9RHOB/9-243; ABC transporter transmembrane region
228-634 -21.600 12 PF09818.4; Q2C6W1_9GAMM/1-438; Predicted ATPase of the ABC class
20 gi|13507759|ref|NP_109708.1| helicases MPN020 [Mycoplasma pneumoniae M129] 1030 PfamA26U 289-571 -11.200 12 PF08455.5; A4J9J5_DESRM/246-626; Bacterial SNF2 helicase associated
558-854 -49.700 24 PF00176.18; RAD54_YEAST/274-621; SNF2 family N-terminal domain
797-1030 -21.600 12 PF11496.3; Q6FSK5_CANGA/26-299; Class II histone deacetylase complex subunits 2 and 3

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|13507740\|ref\|NP_109689.1\| DNA polymerase III beta subunit MPN001 [Mycoplasma pneumoniae M129]`	`380`	`PfamA26U`	`1-121`	`-45.300`	`19`	`PF00712.14; DPO3B_BACSU/1-127; DNA polymerase III beta subunit, N-terminal domain`
				`135-256`	`-39.800`	`13`	`PF02767.11; DPO3B_PROMI/129-244; DNA polymerase III beta subunit, central domain`
				`258-380`	`-54.000`	`23`	`PF02768.10; DPO3B_BACSU/253-376; DNA polymerase III beta subunit, C-terminal domain`
2	`gi\|13507741\|ref\|NP_109690.1\| DnaJ domain-containing protein MPN002 [Mycoplasma pneumoniae M129]`	`309`	`PfamA26U`	`2-61`	`-34.900`	`43`	`PF00226.26; Q22028_CAEEL/17-79; DnaJ domain`
				`147-217`	`-13.600`	`7`	`PF00684.14; DNAJ1_CORGL/147-211; DnaJ central domain`
				`182-282`	`-11.300`	`16`	`PF01556.13; A2FIH5_TRIVA/258-337; DnaJ C terminal domain`
3	`gi\|13507742\|ref\|NP_109691.1\| DNA gyrase subunit B MPN003 [Mycoplasma pneumoniae M129]`	`650`	`PfamA26U`	`43-143`	`-9.890`	`20`	`PF13589.1; A5G4D8_GEOUR/22-165; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase`
				`228-408`	`-75.700`	`40`	`PF00204.20; Q9R3E4_ACISP/115-285; DNA gyrase B`
				`576-639`	`-45.700`	`57`	`PF00986.16; Q6MRR8_BDEBA/731-795; DNA gyrase B subunit, carboxyl terminus`
4	`gi\|13507743\|ref\|NP_109692.1\| DNA gyrase subunit A MPN004 [Mycoplasma pneumoniae M129]`	`839`	`PfamA26U`	`44-474`	`-94.600`	`28`	`PF00521.15; A1ZXC5_9BACT/29-447; DNA gyrase/topoisomerase IV, subunit A`
				`620-665`	`-10.900`	`28`	`PF03989.8; GYRA_HAEIN/641-686; DNA gyrase C-terminal domain, beta-propeller`
5	`gi\|13507744\|ref\|NP_109693.1\| seryl-tRNA synthetase MPN005 [Mycoplasma pneumoniae M129]`	`420`	`PfamA26U`	`1-104`	`-34.800`	`22`	`PF02403.17; Q8GE42_HELMO/1-107; Seryl-tRNA synthetase N-terminal domain`
				`169-338`	`-96.400`	`49`	`PF00587.20; SYS_BACSU/173-344; tRNA synthetase class II core domain (G, H, P, S and T)`
6	`gi\|13507745\|ref\|NP_109694.1\| thymidylate kinase MPN006 [Mycoplasma pneumoniae M129]`	`210`	`PfamA26U`	`9-197`	`-87.800`	`34`	`PF02223.12; KTHY_BACSU/8-199; Thymidylate kinase`
7	`gi\|13507746\|ref\|NP_109695.1\| DNA polymerase III subunit delta' MPN007 [Mycoplasma pneumoniae M129]`	`253`	`PfamA26U`	`2-143`	`-70.700`	`27`	`PF13177.1; B3XQR6_LACRE/12-172; DNA polymerase III, delta subunit`
				`5-185`	`-30.800`	`11`	`PF06068.8; Q9GZH2_CAEEL/17-408; TIP49 C-terminus`
				`5-218`	`-11.300`	`7`	`PF05621.6; Q48383_KLEAE/1-302; Bacterial TniB protein`
8	`gi\|13507747\|ref\|NP_109696.1\| tRNA modification GTPase TrmE MPN008 [Mycoplasma pneumoniae M129]`	`442`	`PfamA26U`	`6-121`	`-54.500`	`34`	`PF10396.4; MNME_PSEA6/12-126; GTP-binding protein TrmE N-terminus`
				`178-420`	`-18.100`	`12`	`PF05049.8; Q9DCE9_MOUSE/50-412; Interferon-inducible GTPase (IIGP)`
				`219-332`	`-38.800`	`29`	`PF01926.18; DER_CHLCV/3-119; 50S ribosome-binding GTPase`
				`368-439`	`-28.500`	`15`	`PF12631.2; B7IBI3_ACIB5/331-403; Catalytic cysteine-containing C-terminus of GTPase, MnmE`
9	`gi\|13507748\|ref\|NP_109697.1\| hydrolase MPN009 [Mycoplasma pneumoniae M129]`	`261`	`PfamA26U`	`4-260`	`-96.200`	`29`	`PF01026.16; Y454_HAEIN/4-256; TatD related DNase`
10	`gi\|13507749\|ref\|NP_109698.1\| hypothetical protein MPN010 [Mycoplasma pneumoniae M129]`	`131`	`PfamA26U`	`38-130`	`-13.500`	`44`	`PF01519.11; Y145_MYCPN/37-164; Protein of unknown function DUF16 topsan`
11	`gi\|13507750\|ref\|NP_109699.1\|(removed signal:1-26) hypothetical protein MPN011 [Mycoplasma pneumoniae M129]`	`205`	`PfamA26U`	`1-82`	`-34.500`	`32`	`PF00938.12; Y646_MYCPN/28-114; Lipoprotein`
12	`gi\|13507751\|ref\|NP_109700.1\|(removed signal:1-21) hypothetical protein MPN012 [Mycoplasma pneumoniae M129]`	`214`	`PfamA26U`	`1-88`	`-37.400`	`33`	`PF00938.12; Y646_MYCPN/28-114; Lipoprotein`
13	`gi\|13507752\|ref\|NP_109701.1\| hypothetical protein MPN013 [Mycoplasma pneumoniae M129]`	`257`	`PfamA26U`	`27-144`	`-15.500`	`9`	`PF04929.7; VG59_EHV2/8-414; Herpes DNA replication accessory factor`
				`42-115`	`-26.400`	`17`	`PF02948.10; Q2HYD7_CHAVD/8-189; Amelogenin`
				`166-256`	`-16.000`	`19`	`PF01519.11; Y145_MYCPN/37-164; Protein of unknown function DUF16 topsan`
14	`gi\|13507753\|ref\|NP_109702.1\| hypothetical protein MPN014 [Mycoplasma pneumoniae M129]`	`212`	`PfamA26U`	`2-101`	`-43.300`	`15`	`PF08275.6; Q64P92_BACFR/123-254; DNA primase catalytic core, N-terminal domain`
				`108-195`	`-42.300`	`27`	`PF13155.1; C5EJG0_9FIRM/258-343; Toprim-like`
15	`gi\|13507754\|ref\|NP_109703.1\| hypothetical protein MPN015 [Mycoplasma pneumoniae M129]`	`285`	`PfamA26U`	`4-273`	`-48.500`	`12`	`PF05770.6; Q9AYJ2_ORYSJ/16-320; Inositol 1, 3, 4-trisphosphate 5/6-kinase`
				`92-271`	`-65.900`	`17`	`PF08443.6; RIMK_HAEIN/105-293; RimK-like ATP-grasp domain`
16	`gi\|13507755\|ref\|NP_109704.1\| ribosomal S6 modification protein MPN016 [Mycoplasma pneumoniae M129]`	`288`	`PfamA26U`	`12-287`	`-43.800`	`10`	`PF05770.6; Q9AYJ2_ORYSJ/16-320; Inositol 1, 3, 4-trisphosphate 5/6-kinase`
				`90-287`	`-67.500`	`25`	`PF08443.6; RIMK_HAEIN/105-293; RimK-like ATP-grasp domain`
17	`gi\|13507756\|ref\|NP_109705.1\| 5,10-methylene-tetrahydrofolate dehydrogenase MPN017 [Mycoplasma pneumoniae M129]`	`269`	`PfamA26U`	`2-111`	`-56.300`	`30`	`PF00763.18; FOLD_SHIFL/4-121; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain`
				`114-265`	`-77.000`	`25`	`PF02882.14; Q9ZVI8_ARATH/182-349; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain`
18	`gi\|13507757\|ref\|NP_109706.1\|(removed signal:1-25) transport ATP-binding protein MPN018 [Mycoplasma pneumoniae M129]`	`598`	`PfamA26U`	`8-249`	`-15.800`	`8`	`PF13748.1; B6R989_9RHOB/9-243; ABC transporter transmembrane region`
				`168-589`	`-25.600`	`10`	`PF09818.4; Q2C6W1_9GAMM/1-438; Predicted ATPase of the ABC class`
19	`gi\|13507758\|ref\|NP_109707.1\| transport ATP-binding protein MPN019 [Mycoplasma pneumoniae M129]`	`634`	`PfamA26U`	`43-329`	`-31.400`	`7`	`PF13748.1; B6R989_9RHOB/9-243; ABC transporter transmembrane region`
				`228-634`	`-21.600`	`12`	`PF09818.4; Q2C6W1_9GAMM/1-438; Predicted ATPase of the ABC class`
20	`gi\|13507759\|ref\|NP_109708.1\| helicases MPN020 [Mycoplasma pneumoniae M129]`	`1030`	`PfamA26U`	`289-571`	`-11.200`	`12`	`PF08455.5; A4J9J5_DESRM/246-626; Bacterial SNF2 helicase associated`
				`558-854`	`-49.700`	`24`	`PF00176.18; RAD54_YEAST/274-621; SNF2 family N-terminal domain`
				`797-1030`	`-21.600`	`12`	`PF11496.3; Q6FSK5_CANGA/26-299; Class II histone deacetylase complex subunits 2 and 3`