current user: public




Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

Page size:   Sort by score   Show only entries containing string:

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 55674next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 sp|Q29940|1B59_HUMAN(removed signalp:1-24) HLA class I histocompatibility antigen, B-59 alpha chain OS=Homo sapiens GN=HLA-B PE=2 SV=1 338 COG1214 2-338 -8.110 [R] KOG3515 Predicted transmembrane protein of the immunoglobulin family of cell adhesion molecules
H.sapiens 1-338 -142.000 96  sp|P30492|1B54_HUMAN(removed signalp:1-24) HLA class I histocompatibility antigen, B-54 alpha chain OS=Homo sapiens GN=HLA-B PE=2 SV=1
HGM_OVER 275-338 -4.640 20  HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907;
JCSG1214 19-278 -11.500 17  RC21382A RAB229_LC 430677 Cloned-2014-07-04
51-278 -12.600 18  RC21383A RAB229_HC 430678 Cloned-2014-07-04
NEW_HUMAN_DOMAINS 4-64 -6.790 18  sp|A6NKG5|RTL1_HUMAN Retrotransposon-like protein 1 OS=Homo sapiens GN=RTL1 PE=2 SV=2 (Range: 334-411)
PDB1214 1-338 -125.000 66  1s7u_A mol:protein length:338 H-2 class I histocompatibility antigen, D-B a
PfamA27U 1-179 -95.100 79  PF00129.13; 1A01_SAGOE/25-203; Class I Histocompatibility antigen, domains alpha 1 and 2
123-311 -14.100 15  PF02124.10; Q8JMQ7_9ALPH/202-414; Marek`s disease glycoprotein A
184-271 -28.100 26  PF07654.10; IGHG3_MOUSE/234-320; Immunoglobulin C1-set domain
SCOP175 1-181 -94.000 88  d1k5na2 d.19.1.1 (A:1-181) Class I MHC, alpha-1 and alpha-2 domains {Human (Homo sapiens), HLA-B27 [TaxId: 9606]}
182-276 -71.500 100  d1k5na1 b.1.1.2 (A:182-276) Class I MHC, alpha-3 domain {Human (Homo sapiens) [TaxId: 9606]}
VFDB 81-130 -5.080 16  VFG1137 (gi:15641807) VC1804 - hypothetical protein [Vibrio cholerae N16961]
2 sp|P08908|5HT1A_HUMAN 5-hydroxytryptamine receptor 1A OS=Homo sapiens GN=HTR1A PE=1 SV=3 422 COG1214 2-422 -102.000 33  [R] KOG3656 FOG: 7 transmembrane receptor
H.sapiens 1-422 -123.000 29  sp|P08913|ADA2A_HUMAN Alpha-2A adrenergic receptor OS=Homo sapiens GN=ADRA2A PE=1 SV=3
HGM_OVER 1-207 -6.310 11  HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255;
JCSG1214 39-346 -9.880 11  SP2363M YP_001297548.1 409804 Purified-2010-09-29
NEW_HUMAN_DOMAINS 63-217 -5.970 18  sp|A0PJX8|TMM82_HUMAN Transmembrane protein 82 OS=Homo sapiens GN=TMEM82 PE=2 SV=2 (Range: 97-285)
PDB1214 17-421 -120.000 35  4iaq_A mol:protein length:403 Chimera protein of human 5-hydroxytryptamine
PfamA27U 36-422 -50.000 10  PF04789.10; E3LU62_CAERE/637-942; Protein of unknown function (DUF621 topsan)
53-400 -97.000 38  PF00001.16; HRH2_CANFA/35-288; 7 transmembrane receptor (rhodopsin family)
SCOP175 1-417 -65.500 18  d1u19a_ f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: 9913]}
VFDB 53-241 -9.440 19  VFG1856 (gi:52841094) ccmC - heme exporter protein CcmC [Legionella pneumophila Philadelphia 1] (VF0292)
3 sp|Q15758|AAAT_HUMAN Neutral amino acid transporter B(0) OS=Homo sapiens GN=SLC1A5 PE=1 SV=2 541 COG1214 50-506 -86.600 21  [R] COG1823 Predicted Na+/dicarboxylate symporter
H.sapiens 14-541 -132.000 57  sp|P43007|SATT_HUMAN Neutral amino acid transporter A OS=Homo sapiens GN=SLC1A4 PE=1 SV=1
HGM_OVER 344-487 -5.490 17  PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]
JCSG1214 335-470 -6.700 17  GS13197A YP_001301730.1 384619 Selected-2007-09-11
NEW_HUMAN_DOMAINS 382-492 -5.910 14  sp|Q9Y6V0|PCLO_HUMAN Protein piccolo OS=Homo sapiens GN=PCLO PE=1 SV=4 (Range: 2558-2677)
PDB1214 42-497 -96.700 28  4ky0_A mol:protein length:431 Proton/glutamate symporter, SDF family
PfamA27U 54-485 -67.900 18  PF00375.13; A4CFF6_9GAMM/3-377; Sodium:dicarboxylate symporter family
SCOP175 54-486 -91.100 30  d2nwwa1 f.49.1.1 (A:12-416) Proton glutamate symport protein {Pyrococcus horikoshii [TaxId: 53953]}
VFDB 340-539 -5.320 VFG2249 (gi:49476210) trwN - trwN protein [Bartonella henselae Houston-1] (VF0372)
4 sp|P61221|ABCE1_HUMAN ATP-binding cassette sub-family E member 1 OS=Homo sapiens GN=ABCE1 PE=1 SV=1 599 COG1214 1-599 -144.000 69  [A] KOG0063 RNAse L inhibitor, ABC superfamily
H.sapiens 64-293 -30.600 20  sp|Q8NE71|ABCF1_HUMAN ATP-binding cassette sub-family F member 1 OS=Homo sapiens GN=ABCF1 PE=1 SV=2 (Range: 601-845)
216-469 -28.800 18  sp|Q8NE71|ABCF1_HUMAN ATP-binding cassette sub-family F member 1 OS=Homo sapiens GN=ABCF1 PE=1 SV=2 (Range: 451-750)
332-541 -30.600 19  sp|Q8IUA7|ABCA9_HUMAN ATP-binding cassette sub-family A member 9 OS=Homo sapiens GN=ABCA9 PE=1 SV=1 (Range: 1201-1500)
348-590 -27.200 20  sp|Q9NUT2|ABCB8_HUMAN ATP-binding cassette sub-family B member 8, mitochondrial OS=Homo sapiens GN=ABCB8 PE=1 SV=3 (Range: 451-735)
HGM_OVER 1-65 -5.580 24  HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;
JCSG1214 1-599 -158.000 100  MA0027A 13529349 399876 Purified-2009-03-14
NEW_HUMAN_DOMAINS 10-64 -8.700 28  sp|Q8IUB5|WFD13_HUMAN Protein WFDC13 OS=Homo sapiens GN=WFDC13 PE=2 SV=1 (Range: 23-93)
PDB1214 1-599 -146.000 68  3j16_B mol:protein length:608 Rli1p
PfamA27U 6-37 -21.100 75  PF04068.10; A3FQC8_CRYPI/19-50; Possible Fer4-like domain in RNase L inhibitor, RLI
9-72 -16.200 27  PF14697.1; E4PIH9_MARAH/57-111; 4Fe-4S dicluster domain
67-525 -13.400 10  PF13175.1; A9A6W0_METM6/4-391; AAA ATPase domain
93-245 -26.800 18  PF00005.22; YTFR_ECOLI/25-174; ABC transporter
370-525 -14.700 13  PF13401.1; B2UJB3_RALPJ/42-210; AAA domain
SCOP175 8-82 -24.100 21  d1jb0c_ d.58.1.2 (C:) Photosystem I iron-sulfur protein PsaC {Synechococcus elongatus [TaxId: 32046]}
77-326 -36.500 17  d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
317-586 -25.900 20  d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
346-538 -37.200 15  d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
VFDB 1-310 -27.000 19  VFG1269 (gi:33591935) cyaB - cyclolysin secretion ATP-binding protein [Bordetella pertussis Tohama I] (VF0028)
78-581 -43.500 17  VFG1653 (gi:28316233) iroC - ABC transport protein [Escherichia coli 536]
5 sp|P07108|ACBP_HUMAN Acyl-CoA-binding protein OS=Homo sapiens GN=DBI PE=1 SV=2 87 COG1214 1-86 -61.800 48  [I] COG4281 Acyl-CoA-binding protein
H.sapiens 3-87 -61.400 62  sp|Q8N6N7|ACBD7_HUMAN Acyl-CoA-binding domain-containing protein 7 OS=Homo sapiens GN=ACBD7 PE=1 SV=1
HGM_OVER 1-59 -3.510 15  PB162065 _Gut.Meta.Jp.0089312_ gi|162832207|dbj|BABA01012502.1||1 (- 0:1326~0 complete)
JCSG1214 29-67 -6.990 17  SP19244A YP_095193.1 412198 Purified-2010-09-29
NEW_HUMAN_DOMAINS 5-58 -6.720 28  sp|Q13686|ALKB1_HUMAN Alkylated DNA repair protein alkB homolog 1 OS=Homo sapiens GN=ALKBH1 PE=1 SV=2 (Range: 1-52)
PDB1214 1-87 -64.000 100  2cb8_A mol:protein length:87 ACYL-COA-BINDING PROTEIN
PfamA27U 2-85 -57.600 50  PF00887.14; Q4PAA4_USTMA/3-91; Acyl CoA binding protein
SCOP175 2-87 -62.300 93  d1hb6a_ a.11.1.1 (A:) Acyl-CoA binding protein {Cow (Bos taurus) [TaxId: 9913]}
VFDB 1-85 -5.150 16  VFG0326 (gi:16273437) lic1A - lic-1 operon protein (licA) [Haemophilus influenzae Rd] (VF0044)
6 sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 1-300) 300 COG1214 1-300 -93.000 34  [IQ] KOG0135 Pristanoyl-CoA/acyl-CoA oxidase
H.sapiens 18-293 -109.000 30  sp|Q15067|ACOX1_HUMAN Peroxisomal acyl-coenzyme A oxidase 1 OS=Homo sapiens GN=ACOX1 PE=1 SV=3 (Range: 1-300)
HGM_OVER 147-295 -3.410 11  PB045813 Q5LF03_BACFN/1-275 PB045813; Pfam-B_45813;
JCSG1214 33-279 -12.900 17  MA1177E NP_082313.2 400042 Selected-2008-12-22
NEW_HUMAN_DOMAINS 158-219 -4.780 23  sp|Q6P387|CP046_HUMAN Uncharacterized protein C16orf46 OS=Homo sapiens GN=C16orf46 PE=2 SV=2 (Range: 27-108)
PDB1214 17-299 -90.800 34  1w07_A mol:protein length:659 ACYL-COA OXIDASE
PfamA27U 31-153 -29.200 10  PF14749.1; F1R3V9_DANRE/15-133; Acyl-coenzyme A oxidase N-terminal
SCOP175 17-289 -108.000 35  d1w07a3 e.6.1.2 (A:2-272) Acyl-coenzyme A oxidase 1, domains 1 and 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
VFDB 123-259 -6.020 17  VFG0037 (gi:33591350) bplB - probable acetyltransferase [Bordetella pertussis Tohama I] (VF0033)
7 sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 151-450) 300 COG1214 1-300 -112.000 43  [IQ] KOG0135 Pristanoyl-CoA/acyl-CoA oxidase
H.sapiens 6-300 -132.000 38  sp|Q99424|ACOX2_HUMAN Peroxisomal acyl-coenzyme A oxidase 2 OS=Homo sapiens GN=ACOX2 PE=1 SV=1 (Range: 151-450)
HGM_OVER 15-227 -3.760 15  PB048276 _Gut.Meta.Jp.0112258_ gi|163310311|dbj|BABD01000385.1||2 (- 258:885~0 complete)
JCSG1214 1-292 -17.400 21  MA1177E NP_082313.2 400042 Selected-2008-12-22
NEW_HUMAN_DOMAINS 88-216 -5.230 11  sp|A4D0S4|LAMB4_HUMAN Laminin subunit beta-4 OS=Homo sapiens GN=LAMB4 PE=2 SV=1 (Range: 585-721)
PDB1214 1-300 -110.000 43  1w07_A mol:protein length:659 ACYL-COA OXIDASE
PfamA27U 144-300 -17.500 17  PF00441.19; O33331_MYCTU/253-403; Acyl-CoA dehydrogenase, C-terminal domain
SCOP175 1-139 -76.100 51  d1w07a3 e.6.1.2 (A:2-272) Acyl-coenzyme A oxidase 1, domains 1 and 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
148-300 -69.800 38  d1w07a1 a.29.3.2 (A:273-461) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
VFDB 24-136 -5.170 17  VFG0351 (gi:16121585) psaA - pH 6 antigen precursor (antigen 4) (adhesin) [Yersinia pestis CO92] (VF0134)
8 sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 301-600) 300 COG1214 1-300 -77.900 27  [I] KOG0136 Acyl-CoA oxidase
H.sapiens 11-300 -106.000 26  sp|Q99424|ACOX2_HUMAN Peroxisomal acyl-coenzyme A oxidase 2 OS=Homo sapiens GN=ACOX2 PE=1 SV=1 (Range: 301-600)
HGM_OVER 51-174 -3.960 15  HGC00573 gi|163306732|dbj|BABD01003960.1|2.0 TMP00669;
JCSG1214 2-176 -7.890 17  MA1177E NP_082313.2 400042 Selected-2008-12-22
NEW_HUMAN_DOMAINS 28-156 -6.170 12  sp|Q9HA72|CAHM2_HUMAN Calcium homeostasis modulator protein 2 OS=Homo sapiens GN=CALHM2 PE=2 SV=1 (Range: 206-323)
PDB1214 1-300 -79.200 30  1w07_A mol:protein length:659 ACYL-COA OXIDASE
PfamA27U 1-166 -25.600 18  PF00441.19; O33331_MYCTU/253-403; Acyl-CoA dehydrogenase, C-terminal domain
210-300 -23.000 15  PF01756.14; O62140_CAEEL/484-669; Acyl-CoA oxidase
SCOP175 1-187 -90.800 36  d1w07a1 a.29.3.2 (A:273-461) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
195-300 -23.200 20  d1w07a2 a.29.3.2 (A:462-659) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
VFDB 7-166 -4.760 11  VFG0734 (gi:2865294) espH - Orf18 [Escherichia coli E2348/69] (VF0183)
9 sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 451-700) 250 COG1214 1-246 -56.100 23  [I] KOG0136 Acyl-CoA oxidase
H.sapiens 11-250 -81.100 23  sp|Q99424|ACOX2_HUMAN Peroxisomal acyl-coenzyme A oxidase 2 OS=Homo sapiens GN=ACOX2 PE=1 SV=1 (Range: 451-681)
HGM_OVER 72-213 -3.670 15  PB177066 Q891G9_CLOTE/1-159 PB177066; Pfam-B_177066;
JCSG1214 66-217 -6.110 14  RH20087A YP_001051696.1 415300 Selected-2009-12-04
NEW_HUMAN_DOMAINS 105-184 -6.050 sp|P0C6P0|BCL8_HUMAN Putative protein BCL8 OS=Homo sapiens GN=NBEAP1 PE=5 SV=1 (Range: 1-100)
PDB1214 1-250 -58.700 23  1w07_A mol:protein length:659 ACYL-COA OXIDASE
PfamA27U 60-245 -69.600 18  PF01756.14; O62140_CAEEL/484-669; Acyl-CoA oxidase
SCOP175 1-42 -13.600 23  d1w07a1 a.29.3.2 (A:273-461) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
43-250 -69.800 23  d1w07a2 a.29.3.2 (A:462-659) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
VFDB 1-193 -6.460 12  VFG0072 (gi:16802246) prfA - listeriolysin positive regulatory protein [Listeria monocytogenes (serovar 1/2a) EGD-e] (VF0062)
10 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 1-300) 300 COG1214 3-300 -63.400 25  [O] KOG3607 Meltrins, fertilins and related Zn-dependent metalloproteinases of the ADAMs family
H.sapiens 10-300 -118.000 40  sp|Q9BZ11|ADA33_HUMAN(removed signalp:1-28) Disintegrin and metalloproteinase domain-containing protein 33 OS=Homo sapiens GN=ADAM33 PE=1 SV=2 (Range: 1-300)
HGM_OVER 104-238 -5.100 PB007011 gi|160888195|ref|ZP_02069198.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]gi|156862330|gb|EDO55761.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]
JCSG1214 9-300 -36.300 12  SP19064A YP_094096.1 412109 Selected-2009-11-12
NEW_HUMAN_DOMAINS 62-156 -6.230 13  sp|Q8N2E2|VWDE_HUMAN von Willebrand factor D and EGF domain-containing protein OS=Homo sapiens GN=VWDE PE=2 SV=4 (Range: 21-163)
PDB1214 31-300 -43.200 3p24_A mol:protein length:397 BFT-3
179-300 -61.600 49  1r54_A mol:protein length:214 ADAM 33
PfamA27U 18-137 -42.700 28  PF01562.14; ATS3_HUMAN/42-201; Reprolysin family propeptide
185-300 -56.200 24  PF01421.14; ADAM2_BOVIN/178-375; Reprolysin (M12B) family zinc metalloprotease
SCOP175 183-300 -61.200 50  d1r55a_ d.92.1.9 (A:) ADAM33 {Human (Homo sapiens) [TaxId: 9606]}
VFDB 54-277 -5.040 12  VFG1417 (gi:15610738) panC - panC [Mycobacterium tuberculosis H37Rv] (VF0319)
11 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 151-450) 300 COG1214 16-300 -71.200 33  [O] KOG3607 Meltrins, fertilins and related Zn-dependent metalloproteinases of the ADAMs family
H.sapiens 4-300 -127.000 51  sp|Q9BZ11|ADA33_HUMAN(removed signalp:1-28) Disintegrin and metalloproteinase domain-containing protein 33 OS=Homo sapiens GN=ADAM33 PE=1 SV=2 (Range: 151-450)
HGM_OVER 38-257 -4.670 10  PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;
JCSG1214 3-273 -38.600 13  SP19064A YP_094096.1 412109 Selected-2009-11-12
NEW_HUMAN_DOMAINS 132-290 -7.390 17  sp|Q9BXP8|PAPP2_HUMAN Pappalysin-2 OS=Homo sapiens GN=PAPPA2 PE=1 SV=4 (Range: 838-1362)
PDB1214 20-300 -109.000 39  2ero_A mol:protein length:427 vascular apoptosis-inducing protein 1
PfamA27U 35-233 -77.300 24  PF01421.14; ADAM2_BOVIN/178-375; Reprolysin (M12B) family zinc metalloprotease
250-300 -24.900 45  PF00200.18; ADA32_HUMAN/400-477; Disintegrin
SCOP175 33-234 -92.800 55  d1r55a_ d.92.1.9 (A:) ADAM33 {Human (Homo sapiens) [TaxId: 9606]}
252-300 -22.900 60  d1j2la_ g.20.1.1 (A:) Flavoridin (triflavin) {Habu snake (Trimeresurus flavoviridis) [TaxId: 88087]}
VFDB 42-219 -6.930 12  VFG1115 (gi:15641785) nanK - ROK family protein [Vibrio cholerae N16961]
12 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 301-600) 300 COG1214 2-299 -76.600 35  [O] KOG3607 Meltrins, fertilins and related Zn-dependent metalloproteinases of the ADAMs family
H.sapiens 4-300 -99.600 53  sp|Q9BZ11|ADA33_HUMAN(removed signalp:1-28) Disintegrin and metalloproteinase domain-containing protein 33 OS=Homo sapiens GN=ADAM33 PE=1 SV=2 (Range: 301-600)
HGM_OVER 140-206 -7.220 18  PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;
JCSG1214 1-299 -18.400 11  SP19064A YP_094096.1 412109 Selected-2009-11-12
NEW_HUMAN_DOMAINS 75-281 -8.980 15  sp|Q9BXP8|PAPP2_HUMAN Pappalysin-2 OS=Homo sapiens GN=PAPPA2 PE=1 SV=4 (Range: 838-1362)
PDB1214 1-259 -83.300 40  2e3x_A mol:protein length:427 Coagulation factor X-activating enzyme heavy
1-299 -81.800 36  3g5c_A mol:protein length:510 ADAM 22
PfamA27U 1-83 -25.800 25  PF01421.14; ADAM2_BOVIN/178-375; Reprolysin (M12B) family zinc metalloprotease
100-175 -35.500 42  PF00200.18; ADA32_HUMAN/400-477; Disintegrin
177-293 -41.900 25  PF08516.7; ADAM2_MACFA/473-589; ADAM cysteine-rich
SCOP175 1-84 -32.700 60  d1r55a_ d.92.1.9 (A:) ADAM33 {Human (Homo sapiens) [TaxId: 9606]}
102-172 -30.700 50  d1j2la_ g.20.1.1 (A:) Flavoridin (triflavin) {Habu snake (Trimeresurus flavoviridis) [TaxId: 88087]}
VFDB 23-257 -6.030 12  VFG0486 (gi:16764735) ttrB - Tetrathionate reductase complex, subunit B [Salmonella enterica (serovar typhimurium) LT2]
13 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 451-750) 300 COG1214 1-265 -67.200 32  [O] KOG3607 Meltrins, fertilins and related Zn-dependent metalloproteinases of the ADAMs family
1-300 -35.200 16  [W] KOG3658 Tumor necrosis factor-alpha-converting enzyme (TACE/ADAM17) and related metalloproteases
H.sapiens 3-300 -98.200 40  sp|Q9BZ11|ADA33_HUMAN(removed signalp:1-28) Disintegrin and metalloproteinase domain-containing protein 33 OS=Homo sapiens GN=ADAM33 PE=1 SV=2 (Range: 451-750)
HGM_OVER 1-56 -5.970 18  PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;
JCSG1214 12-214 -8.450 19  HN13881A NM_016256.3 423397 Cloned-2013-04-04
NEW_HUMAN_DOMAINS 7-104 -7.220 17  sp|Q5NDL2|AER61_HUMAN Uncharacterized glycosyltransferase AER61 OS=Homo sapiens GN=AER61 PE=2 SV=1 (Range: 19-152)
PDB1214 1-229 -70.500 33  3g5c_A mol:protein length:510 ADAM 22
PfamA27U 5-255 -11.600 13  PF07243.6; GP_PTPV/282-808; Phlebovirus glycoprotein G1
27-151 -44.400 23  PF08516.7; ADAM2_MACFA/473-589; ADAM cysteine-rich
SCOP175 1-29 -11.000 34  d2echa_ g.20.1.1 (A:) Echistatin {Saw-scaled viper (Echis carinatus) [TaxId: 40353]}
VFDB 5-198 -5.230 10  VFG2239 (gi:49476018) virB10 - virB10 protein homolog [Bartonella henselae Houston-1] (VF0369)
14 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 601-900) 300 COG1214 1-114 -31.400 28  [O] KOG3607 Meltrins, fertilins and related Zn-dependent metalloproteinases of the ADAMs family
1-272 -23.400 13  [W] KOG3658 Tumor necrosis factor-alpha-converting enzyme (TACE/ADAM17) and related metalloproteases
H.sapiens 1-285 -65.000 28  sp|O43184|ADA12_HUMAN(removed signalp:1-28) Disintegrin and metalloproteinase domain-containing protein 12 OS=Homo sapiens GN=ADAM12 PE=1 SV=3 (Range: 601-881)
HGM_OVER 7-142 -4.870 10  PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;
JCSG1214 1-300 -12.600 SP17586C NP_439153.1 411588 Selected-2009-11-12
NEW_HUMAN_DOMAINS 7-65 -7.630 18  sp|Q9UKN1|MUC12_HUMAN Mucin-12 OS=Homo sapiens GN=MUC12 PE=1 SV=2 (Range: 5276-5380)
PDB1214 1-79 -31.700 31  3g5c_A mol:protein length:510 ADAM 22
PfamA27U 5-68 -11.300 25  PF04885.8; Q40579_TOBAC/7-146; Stigma-specific protein, Stig1
21-295 -11.000 PF05934.6; CLCC1_HUMAN/3-551; Mid-1-related chloride channel (MCLC)
SCOP175 2-59 -7.510 17  d1ofwa_ a.138.1.1 (A:) Nine-heme cytochrome c {Desulfovibrio desulfuricans, ATCC 27774 [TaxId: 876]}
VFDB 1-300 -12.600 VFG0337 (gi:16272928) iga - immunoglobin A1 protease [Haemophilus influenzae Rd] (VF0045)
15 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 751-930) 180 COG1214 2-180 -19.800 [Z] KOG3756 Pinin (desmosome-associated protein)
H.sapiens 5-166 -20.400 sp|P49750|YLPM1_HUMAN YLP motif-containing protein 1 OS=Homo sapiens GN=YLPM1 PE=1 SV=3 (Range: 601-900)
6-134 -22.500 10  sp|P41440|S19A1_HUMAN Folate transporter 1 OS=Homo sapiens GN=SLC19A1 PE=1 SV=3
HGM_OVER 115-180 -4.780 HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;
JCSG1214 28-180 -27.400 SP2600AD YP_794564.1 411897 Selected-2009-11-12
NEW_HUMAN_DOMAINS 179-180 -3.520 50  sp|Q8N402|YV020_HUMAN Putative uncharacterized protein LOC388882 OS=Homo sapiens PE=2 SV=1 (Range: 97-240)
PDB1214 1-148 -12.300 3gdb_A mol:protein length:937 Putative uncharacterized protein spr0440
5-120 -13.100 12  3nw8_B mol:protein length:703 Envelope glycoprotein B
31-180 -11.800 15  2wvr_C mol:protein length:546 DNA REPLICATION FACTOR CDT1
PfamA27U 1-180 -26.600 PF11725.3; A8E3E7_PSEVI/1-1719; Pathogenicity factor
SCOP175 6-92 -4.660 33  d1gw5a_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
VFDB 2-180 -25.700 VFG0337 (gi:16272928) iga - immunoglobin A1 protease [Haemophilus influenzae Rd] (VF0045)
16 sp|P11766|ADHX_HUMAN Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4 374 COG1214 6-374 -129.000 62  [C] COG1062 Zn-dependent alcohol dehydrogenases, class III
H.sapiens 2-374 -128.000 63  sp|P07327|ADH1A_HUMAN Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A PE=1 SV=2
HGM_OVER 194-298 -2.940 13  HGC00993 gi|163626727|dbj|BABG01009540.1|1.0 TMP01352;
JCSG1214 5-372 -73.500 26  TM0436 TM0436 282309 PDB-2003-12-02
NEW_HUMAN_DOMAINS 122-269 -18.800 12  sp|Q9Y692|GMEB1_HUMAN Glucocorticoid modulatory element-binding protein 1 OS=Homo sapiens GN=GMEB1 PE=1 SV=2 (Range: 403-573)
PDB1214 1-374 -130.000 100  1mc5_A mol:protein length:374 Alcohol dehydrogenase class III chi chain
PfamA27U 4-202 -10.400 15  PF16884; F0SJM3.1/9-160; N-terminal domain of oxidoreductase
32-160 -29.700 23  PF08240.7; Q92UI4_RHIME/24-130; Alcohol dehydrogenase GroES-like domain
181-374 -20.300 17  PF16912; D2RW30.1/144-362; Glucose dehydrogenase C-terminus
202-333 -22.800 21  PF00107.21; ADH_SULSO/182-311; Zinc-binding dehydrogenase
SCOP175 2-198 -88.900 54  d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}
164-339 -80.100 65  d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}
VFDB 166-251 -4.170 25  VFG1257 (gi:15596641) fliN - flagellar motor switch protein FliN [Pseudomonas aeruginosa PAO1] (VF0273)
17 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 1-300) 300 COG1214 2-300 -29.300 [R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)
H.sapiens 1-164 -14.900 14  sp|Q8N884|CF150_HUMAN Uncharacterized protein C6orf150 OS=Homo sapiens GN=C6orf150 PE=1 SV=2
23-274 -14.400 sp|Q9P2B7|K1430_HUMAN UPF0501 protein KIAA1430 OS=Homo sapiens GN=KIAA1430 PE=1 SV=2
42-185 -18.400 14  sp|Q8N7K9|YS059_HUMAN Uncharacterized protein FLJ40925 OS=Homo sapiens PE=1 SV=1
42-215 -15.400 13  sp|Q9ULL5|PRR12_HUMAN Proline-rich protein 12 OS=Homo sapiens GN=PRR12 PE=1 SV=2 (Range: 751-1050)
HGM_OVER 1-82 -3.030 PB069407 _HOMD.0084606_ pint_c_2_12 Prevotella intermedia 17 [3585 - 4295] ORF
JCSG1214 2-300 -23.400 SP18146A NP_345481.1 413783 Selected-2009-11-12
NEW_HUMAN_DOMAINS 28-64 -5.230 18  sp|P18583|SON_HUMAN Protein SON OS=Homo sapiens GN=SON PE=1 SV=4 (Range: 606-751)
PDB1214 1-300 -10.200 13  1i3q_A mol:protein length:1733 DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNI
63-173 -10.400 4rco_A mol:protein length:295 Putative uncharacterized protein
PfamA27U 1-300 -19.100 10  PF11725.3; A8E3E7_PSEVI/1-1719; Pathogenicity factor
SCOP175 4-88 -4.250 100  d1gw5a_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
VFDB 6-300 -22.900 VFG0337 (gi:16272928) iga - immunoglobin A1 protease [Haemophilus influenzae Rd] (VF0045)
18 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 151-450) 300 COG1214 2-288 -23.700 [R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)
H.sapiens 2-161 -12.200 15  sp|Q8N884|CF150_HUMAN Uncharacterized protein C6orf150 OS=Homo sapiens GN=C6orf150 PE=1 SV=2
54-299 -15.300 14  sp|Q9H0W8|SMG9_HUMAN Protein SMG9 OS=Homo sapiens GN=SMG9 PE=1 SV=1
151-300 -23.200 100  sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 301-600)
HGM_OVER 217-300 -4.620 16  PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821;
JCSG1214 4-299 -22.500 SP18146A NP_345481.1 413783 Selected-2009-11-12
NEW_HUMAN_DOMAINS 253-300 -5.010 20  sp|Q9BX69|CARD6_HUMAN Caspase recruitment domain-containing protein 6 OS=Homo sapiens GN=CARD6 PE=1 SV=2 (Range: 448-668)
PDB1214 243-300 -20.900 44  3ihw_A mol:protein length:184 CENTG3
PfamA27U 2-300 -15.000 12  PF11725.3; A8E3E7_PSEVI/1-1719; Pathogenicity factor
SCOP175 252-300 -18.800 100  d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
VFDB 2-288 -15.400 VFG0337 (gi:16272928) iga - immunoglobin A1 protease [Haemophilus influenzae Rd] (VF0045)
19 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 301-600) 300 COG1214 53-257 -9.730 14  [J] KOG0458 Elongation factor 1 alpha
90-293 -62.800 23  [R] KOG0395 Ras-related GTPase
H.sapiens 78-293 -76.100 57  sp|Q96P47|AGAP3_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 OS=Homo sapiens GN=AGAP3 PE=1 SV=2 (Range: 1-300)
HGM_OVER 99-274 -4.270 PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;
JCSG1214 100-274 -49.400 17  XB5526A 10640503 358664 Purified-2005-03-30
NEW_HUMAN_DOMAINS 101-241 -7.150 sp|Q8IVG5|SAM9L_HUMAN Sterile alpha motif domain-containing protein 9-like OS=Homo sapiens GN=SAMD9L PE=1 SV=2 (Range: 687-863)
PDB1214 89-299 -54.100 13  4cz2_A mol:protein length:230 RAS-RELATED PROTEIN RAB-32
100-277 -73.000 98  2bmj_A mol:protein length:178 CENTAURIN GAMMA 1
PfamA27U 108-268 -53.500 28  PF00071.17; RAB9A_CANFA/9-174; Ras family
SCOP175 89-292 -10.100 d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
102-275 -72.500 100  d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
VFDB 109-298 -16.700 13  VFG1062 (gi:15808742) orf46 - unknown [Shigella flexneri (serotype 2a) YSH6000]
20 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 451-750) 300 COG1214 1-143 -46.100 20  [R] KOG0394 Ras-related GTPase
1-176 -38.100 21  [T] KOG4252 GTP-binding protein
64-296 -11.300 32  [T] KOG0705 GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains)
H.sapiens 17-300 -116.000 52  sp|Q96P47|AGAP3_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 OS=Homo sapiens GN=AGAP3 PE=1 SV=2 (Range: 151-450)
HGM_OVER 24-124 -4.450 14  PB030138 Q7MX14_PORGI/1-113 PB030138; Pfam-B_30138;
JCSG1214 1-124 -44.200 15  XB5526A 10640503 358664 Purified-2005-03-30
NEW_HUMAN_DOMAINS 5-80 -5.450 18  sp|Q08AI8|CB054_HUMAN Uncharacterized protein C2orf54 OS=Homo sapiens GN=C2orf54 PE=1 SV=2 (Range: 1-111)
PDB1214 1-127 -64.900 100  2bmj_A mol:protein length:178 CENTAURIN GAMMA 1
PfamA27U 1-118 -45.500 25  PF00071.17; RAB9A_CANFA/9-174; Ras family
SCOP175 1-125 -64.500 100  d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
VFDB 5-123 -7.160 10  VFG1522 (gi:24528051) ORF71 - hypothetical protein [Escherichia coli 536]


FFAS is supported by the NIH grant R01-GM087218-01
6 8 2 8 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Locations of visitors to this page

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Pawlowski K, Jaroszewski L, Rychlewski L, Godzik A. Sensitive sequence comparison as protein function predictor. Pac Symp Biocomput. 2000;:42-53.