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# Query Length Result vs. Range Score %id Covered by template(s)
1 sp|Q29940|1B59_HUMAN(removed signalp:1-24) HLA class I histocompatibility antigen, B-59 alpha chain OS=Homo sapiens GN=HLA-B PE=2 SV=1 338 COG0516 2-338 -7.200 [R] KOG3515 Predicted transmembrane protein of the immunoglobulin family of cell adhesion molecules
H.sapiens 1-338 -139.000 96  sp|P30495|1B56_HUMAN(removed signalp:1-24) HLA class I histocompatibility antigen, B-56 alpha chain OS=Homo sapiens GN=HLA-B PE=2 SV=1
HGM_OVER 64-190 -4.070 16  PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621;
JCSG0516 51-278 -12.100 21  RC21383B RAB54_HC 430680 Cloned-2014-07-04
NEW_HUMAN_DOMAINS 4-64 -5.410 18  sp|A6NKG5|RTL1_HUMAN Retrotransposon-like protein 1 OS=Homo sapiens GN=RTL1 PE=2 SV=2 (Range: 334-411)
PDB0516 1-338 -133.000 66  1s7u_A mol:protein length:338 H-2 class I histocompatibility antigen, D-B a
PfamA30U 1-179 -102.000 73  PF00129.16; HA10_MOUSE/25-203; Class I Histocompatibility antigen, domains alpha 1 and 2
185-266 -24.700 26  PF07654.13; GCAB_MOUSE/234-320; Immunoglobulin C1-set domain
SCOP206 1-181 -102.000 88  d1k5na2 d.19.1.1 (A:1-181) Class I MHC, alpha-1 and alpha-2 domains {Human (Homo sapiens), HLA-B27 [TaxId: 9606]}
182-276 -77.400 100  d1k5na1 b.1.1.2 (A:182-276) Class I MHC, alpha-3 domain {Human (Homo sapiens) [TaxId: 9606]}
VFDB 22-240 -5.750 17  VFG041269(gi:52841392) (lpg1158) Dot/Icm type IV secretion system effector [Dot/Icm (SS047)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
2 sp|P08908|5HT1A_HUMAN 5-hydroxytryptamine receptor 1A OS=Homo sapiens GN=HTR1A PE=1 SV=3 422 COG0516 2-421 -108.000 33  [R] KOG3656 FOG: 7 transmembrane receptor
H.sapiens 5-422 -117.000 31  sp|P18825|ADA2C_HUMAN(removed signalp:1-15) Alpha-2C adrenergic receptor OS=Homo sapiens GN=ADRA2C PE=2 SV=2
HGM_OVER 1-207 -6.170 15  HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255;
JCSG0516 67-345 -9.570 SP2363M YP_001297548.1 409804 Purified-2010-09-29
NEW_HUMAN_DOMAINS 60-155 -6.010 19  sp|Q9NR09|BIRC6_HUMAN Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=2 (Range: 1761-1892)
PDB0516 17-421 -118.000 35  4iaq_A mol:protein length:403 Chimera protein of human 5-hydroxytryptamine
PfamA30U 36-421 -44.900 11  PF04789.13; E3LU62_CAERE/638-942; Protein of unknown function (DUF621 topsan)
53-400 -95.500 38  PF00001.19; HRH2_CANLF/35-288; 7 transmembrane receptor (rhodopsin family)
SCOP206 32-416 -96.900 36  d2rh1a1 f.13.1.3 (A:29-230,A:263-342) Beta2-adrenergic GPCR {Human (Homo sapiens) [TaxId: 9606]}
VFDB 53-241 -8.110 19  VFG001856(gi:52841094) (ccmC) cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE [CcmC (VF0292)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
3 sp|Q15758|AAAT_HUMAN Neutral amino acid transporter B(0) OS=Homo sapiens GN=SLC1A5 PE=1 SV=2 541 COG0516 50-506 -74.300 21  [R] COG1823 Predicted Na+/dicarboxylate symporter
H.sapiens 14-541 -125.000 57  sp|P43007|SATT_HUMAN Neutral amino acid transporter A OS=Homo sapiens GN=SLC1A4 PE=1 SV=1
HGM_OVER 344-487 -4.870 17  PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]
JCSG0516 55-483 -7.130 14  MA2504B NP_004061.3 400119 Selected-2008-12-22
NEW_HUMAN_DOMAINS 392-492 -5.460 13  sp|Q9Y6V0|PCLO_HUMAN Protein piccolo OS=Homo sapiens GN=PCLO PE=1 SV=4 (Range: 2558-2677)
PDB0516 43-497 -86.300 28  4ky0_A mol:protein length:431 Proton/glutamate symporter, SDF family
PfamA30U 54-485 -88.400 36  PF00375.16; Q8EU68_OCEIH/3-398; Sodium:dicarboxylate symporter family
SCOP206 54-486 -82.200 30  d2nwla_ f.49.1.1 (A:) automated matches {Pyrococcus horikoshii [TaxId: 53953]}
VFDB 306-539 -5.470 11  VFG002204(gi:38232862) (spaF) SpaD-type pili minor subunit SpaF, pilus tip protein [Pili (VF0364)] [Corynebacterium diphtheriae NCTC 13129]
4 sp|P61221|ABCE1_HUMAN ATP-binding cassette sub-family E member 1 OS=Homo sapiens GN=ABCE1 PE=1 SV=1 599 COG0516 1-599 -154.000 69  [A] KOG0063 RNAse L inhibitor, ABC superfamily
H.sapiens 69-323 -30.800 18  sp|Q99758|ABCA3_HUMAN ATP-binding cassette sub-family A member 3 OS=Homo sapiens GN=ABCA3 PE=1 SV=2 (Range: 1351-1650)
89-298 -33.100 18  sp|Q03519|TAP2_HUMAN(removed signalp:1-28) Antigen peptide transporter 2 OS=Homo sapiens GN=TAP2 PE=1 SV=1 (Range: 451-658)
322-540 -33.700 19  sp|Q8NE71|ABCF1_HUMAN ATP-binding cassette sub-family F member 1 OS=Homo sapiens GN=ABCF1 PE=1 SV=2 (Range: 601-845)
359-591 -27.600 18  sp|O15438|MRP3_HUMAN Canalicular multispecific organic anion transporter 2 OS=Homo sapiens GN=ABCC3 PE=2 SV=3 (Range: 601-900)
HGM_OVER 442-591 -3.690 PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]
JCSG0516 1-599 -172.000 100  MA0027A 13529349 399876 Purified-2009-03-14
NEW_HUMAN_DOMAINS 373-506 -5.920 10  sp|Q8IVG5|SAM9L_HUMAN Sterile alpha motif domain-containing protein 9-like OS=Homo sapiens GN=SAMD9L PE=1 SV=2 (Range: 687-863)
PDB0516 1-599 -151.000 68  3j16_B mol:protein length:608 Rli1p
PfamA30U 93-245 -29.200 18  PF00005.25; YTFR_ECOLI/25-174; ABC transporter
103-528 -13.000 11  PF13166.4; Q63PW4_BURPS/9-780; AAA domain
370-518 -15.600 13  PF13401.4; B2UJB3_RALPJ/42-210; AAA domain
SCOP206 8-82 -14.800 21  d1jb0c_ d.58.1.2 (C:) Photosystem I iron-sulfur protein PsaC {Synechococcus elongatus [TaxId: 32046]}
81-326 -40.000 17  d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
343-564 -44.400 18  d2nq2c_ c.37.1.0 (C:) automated matches {Haemophilus influenzae [TaxId: 727]}
362-597 -10.100 12  d1cr1a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
VFDB 81-581 -45.900 17  VFG012509(gi:26247127) (iroC) ATP binding cassette transporter [Salmochelin (IA013)] [Escherichia coli CFT073]
5 sp|P07108|ACBP_HUMAN Acyl-CoA-binding protein OS=Homo sapiens GN=DBI PE=1 SV=2 87 COG0516 1-86 -66.500 48  [I] COG4281 Acyl-CoA-binding protein
H.sapiens 3-87 -65.400 62  sp|Q8N6N7|ACBD7_HUMAN Acyl-CoA-binding domain-containing protein 7 OS=Homo sapiens GN=ACBD7 PE=1 SV=1
HGM_OVER 1-59 -3.500 15  PB162065 _Gut.Meta.Jp.0089312_ gi|162832207|dbj|BABA01012502.1||1 (- 0:1326~0 complete)
JCSG0516 29-67 -6.560 17  SP19244A YP_095193.1 412198 Purified-2010-09-29
NEW_HUMAN_DOMAINS 5-58 -6.480 28  sp|Q13686|ALKB1_HUMAN Alkylated DNA repair protein alkB homolog 1 OS=Homo sapiens GN=ALKBH1 PE=1 SV=2 (Range: 1-52)
PDB0516 1-87 -68.400 100  2cb8_A mol:protein length:87 ACYL-COA-BINDING PROTEIN
PfamA30U 3-82 -60.600 35  PF00887.17; B7PHH9_IXOSC/19-99; Acyl CoA binding protein
SCOP206 2-87 -66.800 100  d2cb8a_ a.11.1.1 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
VFDB 6-83 -4.740 16  VFG001309(gi:21281865) (cap8M) capsular polysaccharide synthesis enzyme Cap8M [Capsule (VF0003)] [Staphylococcus aureus subsp. aureus MW2]
6 sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 1-300) 300 COG0516 1-300 -93.700 35  [IQ] KOG0135 Pristanoyl-CoA/acyl-CoA oxidase
H.sapiens 18-299 -112.000 30  sp|Q15067|ACOX1_HUMAN Peroxisomal acyl-coenzyme A oxidase 1 OS=Homo sapiens GN=ACOX1 PE=1 SV=3 (Range: 1-300)
HGM_OVER 157-300 -3.950 11  PB017610 Q11T14_CYTH3/22-188 PB017610; Pfam-B_17610;
JCSG0516 33-300 -13.300 16  MA1177E NP_082313.2 400042 Selected-2008-12-22
NEW_HUMAN_DOMAINS 150-276 -5.910 sp|Q6P2C0|WDR93_HUMAN WD repeat-containing protein 93 OS=Homo sapiens GN=WDR93 PE=2 SV=1 (Range: 101-233)
PDB0516 17-299 -87.300 34  1w07_A mol:protein length:659 ACYL-COA OXIDASE
PfamA30U 31-153 -27.300 10  PF14749.4; F1R3V9_DANRE/15-133; Acyl-coenzyme A oxidase N-terminal
155-266 -17.900 26  PF02770.17; Q7MW70_PORGI/172-269; Acyl-CoA dehydrogenase, middle domain
SCOP206 17-289 -111.000 35  d1w07a3 e.6.1.2 (A:2-272) Acyl-coenzyme A oxidase 1, domains 1 and 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
VFDB 116-300 -22.400 19  VFG021827(gi:15608486) (mbtN) Acyl-CoA dehydrogenase MbtN [mycobactin (IA031)] [Mycobacterium tuberculosis H37Rv]
7 sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 151-450) 300 COG0516 1-300 -114.000 43  [IQ] KOG0135 Pristanoyl-CoA/acyl-CoA oxidase
H.sapiens 6-300 -137.000 38  sp|Q99424|ACOX2_HUMAN Peroxisomal acyl-coenzyme A oxidase 2 OS=Homo sapiens GN=ACOX2 PE=1 SV=1 (Range: 151-450)
HGM_OVER 15-227 -4.020 15  PB048276 _Gut.Meta.Jp.0112258_ gi|163310311|dbj|BABD01000385.1||2 (- 258:885~0 complete)
JCSG0516 1-292 -17.800 21  MA1177E NP_082313.2 400042 Selected-2008-12-22
NEW_HUMAN_DOMAINS 16-126 -5.330 sp|Q6P2C0|WDR93_HUMAN WD repeat-containing protein 93 OS=Homo sapiens GN=WDR93 PE=2 SV=1 (Range: 101-233)
PDB0516 1-300 -107.000 43  1w07_A mol:protein length:659 ACYL-COA OXIDASE
PfamA30U 5-116 -19.000 26  PF02770.17; Q7MW70_PORGI/172-269; Acyl-CoA dehydrogenase, middle domain
144-300 -17.000 17  PF00441.22; I6XFA9_MYCTU/253-403; Acyl-CoA dehydrogenase, C-terminal domain
SCOP206 1-139 -78.600 51  d1w07a3 e.6.1.2 (A:2-272) Acyl-coenzyme A oxidase 1, domains 1 and 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
148-300 -67.900 38  d1w07a1 a.29.3.2 (A:273-461) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
VFDB 1-285 -32.100 26  VFG021827(gi:15608486) (mbtN) Acyl-CoA dehydrogenase MbtN [mycobactin (IA031)] [Mycobacterium tuberculosis H37Rv]
8 sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 301-600) 300 COG0516 1-300 -75.900 28  [I] KOG0136 Acyl-CoA oxidase
H.sapiens 11-300 -106.000 26  sp|Q99424|ACOX2_HUMAN Peroxisomal acyl-coenzyme A oxidase 2 OS=Homo sapiens GN=ACOX2 PE=1 SV=1 (Range: 301-600)
HGM_OVER 52-172 -3.660 13  PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;
JCSG0516 2-178 -7.800 17  MA1177E NP_082313.2 400042 Selected-2008-12-22
NEW_HUMAN_DOMAINS 28-156 -5.830 12  sp|Q9HA72|CAHM2_HUMAN Calcium homeostasis modulator protein 2 OS=Homo sapiens GN=CALHM2 PE=2 SV=1 (Range: 206-323)
PDB0516 1-300 -78.000 30  1w07_A mol:protein length:659 ACYL-COA OXIDASE
PfamA30U 1-166 -25.100 19  PF00441.22; I6XFA9_MYCTU/253-403; Acyl-CoA dehydrogenase, C-terminal domain
210-300 -26.500 42  PF01756.17; K1PYL9_CRAGI/349-534; Acyl-CoA oxidase
SCOP206 1-192 -90.500 36  d1w07a1 a.29.3.2 (A:273-461) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
195-300 -22.900 20  d1w07a2 a.29.3.2 (A:462-659) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
VFDB 1-165 -16.800 27  VFG021827(gi:15608486) (mbtN) Acyl-CoA dehydrogenase MbtN [mycobactin (IA031)] [Mycobacterium tuberculosis H37Rv]
9 sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 (Range: 451-700) 250 COG0516 1-250 -56.300 25  [I] KOG0136 Acyl-CoA oxidase
H.sapiens 11-250 -85.600 24  sp|Q99424|ACOX2_HUMAN Peroxisomal acyl-coenzyme A oxidase 2 OS=Homo sapiens GN=ACOX2 PE=1 SV=1 (Range: 451-681)
HGM_OVER 122-223 -3.920 HGC00962 gi|162759780|dbj|BAAZ01005693.1|3.0 TMP01305;
JCSG0516 7-216 -6.040 11  RH20424A NP_987876.1 416292 Selected-2009-12-04
NEW_HUMAN_DOMAINS 119-209 -5.730 18  sp|Q86UW7|CAPS2_HUMAN Calcium-dependent secretion activator 2 OS=Homo sapiens GN=CADPS2 PE=1 SV=2 (Range: 124-211)
PDB0516 1-250 -58.900 23  1w07_A mol:protein length:659 ACYL-COA OXIDASE
PfamA30U 60-242 -81.000 48  PF01756.17; K1PYL9_CRAGI/349-534; Acyl-CoA oxidase
SCOP206 1-42 -13.800 23  d1w07a1 a.29.3.2 (A:273-461) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
45-250 -74.000 23  d1w07a2 a.29.3.2 (A:462-659) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
VFDB 1-193 -6.140 12  VFG000072(gi:16802246) (prfA) listeriolysin positive regulatory protein [PrfA (VF0062)] [Listeria monocytogenes EGD-e]
10 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 1-300) 300 COG0516 3-300 -70.100 25  [O] KOG3607 Meltrins, fertilins and related Zn-dependent metalloproteinases of the ADAMs family
H.sapiens 10-300 -118.000 40  sp|Q9BZ11|ADA33_HUMAN(removed signalp:1-28) Disintegrin and metalloproteinase domain-containing protein 33 OS=Homo sapiens GN=ADAM33 PE=1 SV=2 (Range: 1-300)
HGM_OVER 104-238 -5.440 11  PB007011 gi|160888195|ref|ZP_02069198.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]gi|156862330|gb|EDO55761.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]
JCSG0516 33-300 -22.000 13  SP19064A YP_094096.1 412109 Selected-2009-11-12
NEW_HUMAN_DOMAINS 62-156 -7.040 13  sp|Q8N2E2|VWDE_HUMAN von Willebrand factor D and EGF domain-containing protein OS=Homo sapiens GN=VWDE PE=2 SV=4 (Range: 21-163)
PDB0516 31-300 -41.000 3p24_A mol:protein length:397 BFT-3
179-300 -61.900 49  1r54_A mol:protein length:214 ADAM 33
PfamA30U 19-137 -38.100 20  PF01562.17; F4WTG8_ACREC/43-191; Reprolysin family propeptide
185-300 -53.000 24  PF01421.17; ADAM2_BOVIN/178-375; Reprolysin (M12B) family zinc metalloprotease
SCOP206 183-300 -61.500 50  d1r55a1 d.92.1.9 (A:208-409) ADAM33 {Human (Homo sapiens) [TaxId: 9606]}
VFDB 53-300 -4.900 14  VFG005289(gi:25010692) (gbs0632) tip adhesin protein [PI-1 (VF0527)] [Streptococcus agalactiae NEM316]
11 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 151-450) 300 COG0516 3-300 -79.600 31  [O] KOG3607 Meltrins, fertilins and related Zn-dependent metalloproteinases of the ADAMs family
H.sapiens 7-300 -123.000 51  sp|Q9BZ11|ADA33_HUMAN(removed signalp:1-28) Disintegrin and metalloproteinase domain-containing protein 33 OS=Homo sapiens GN=ADAM33 PE=1 SV=2 (Range: 151-450)
HGM_OVER 35-182 -4.830 PB009510 _JGI.0345302_ 2004041369 [Human Gut Community Subject 8]
JCSG0516 12-273 -25.300 14  SP19064A YP_094096.1 412109 Selected-2009-11-12
NEW_HUMAN_DOMAINS 70-290 -7.340 15  sp|Q9BXP8|PAPP2_HUMAN Pappalysin-2 OS=Homo sapiens GN=PAPPA2 PE=1 SV=4 (Range: 838-1362)
PDB0516 20-300 -104.000 39  2ero_A mol:protein length:427 vascular apoptosis-inducing protein 1
PfamA30U 35-233 -76.200 25  PF01421.17; ADAM2_BOVIN/178-375; Reprolysin (M12B) family zinc metalloprotease
250-300 -26.000 49  PF00200.21; G3I9D8_CRIGR/417-489; Disintegrin
SCOP206 33-233 -94.600 55  d1r55a1 d.92.1.9 (A:208-409) ADAM33 {Human (Homo sapiens) [TaxId: 9606]}
252-300 -23.800 58  d4r5ra_ g.20.1.1 (A:) Kistrin (rhodostomin) {Agkistrodon rhodostoma [TaxId: 8717]}
VFDB 32-291 -10.700 11  VFG045533(gi:52841895) (lpg1667) Dot/Icm type IV secretion system effector [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
12 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 301-600) 300 COG0516 2-300 -85.000 37  [O] KOG3607 Meltrins, fertilins and related Zn-dependent metalloproteinases of the ADAMs family
H.sapiens 4-300 -98.500 53  sp|Q9BZ11|ADA33_HUMAN(removed signalp:1-28) Disintegrin and metalloproteinase domain-containing protein 33 OS=Homo sapiens GN=ADAM33 PE=1 SV=2 (Range: 301-600)
HGM_OVER 140-206 -7.170 18  PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;
JCSG0516 1-274 -11.100 11  SP19064A YP_094096.1 412109 Selected-2009-11-12
8-73 -12.300 14  SP13134B YP_194247.1 411803 Selected-2009-11-12
NEW_HUMAN_DOMAINS 12-227 -8.290 11  sp|Q8IWV7|UBR1_HUMAN E3 ubiquitin-protein ligase UBR1 OS=Homo sapiens GN=UBR1 PE=1 SV=1 (Range: 1270-1749)
PDB0516 1-259 -82.800 40  2e3x_A mol:protein length:427 Coagulation factor X-activating enzyme heavy
1-300 -81.900 37  2ero_A mol:protein length:427 vascular apoptosis-inducing protein 1
PfamA30U 1-83 -25.000 26  PF01421.17; ADAM2_BOVIN/178-375; Reprolysin (M12B) family zinc metalloprotease
100-172 -38.400 49  PF00200.21; G3I9D8_CRIGR/417-489; Disintegrin
177-299 -40.600 31  PF08516.10; F7FQP8_MONDO/502-619; ADAM cysteine-rich
SCOP206 1-83 -32.900 62  d1r55a1 d.92.1.9 (A:208-409) ADAM33 {Human (Homo sapiens) [TaxId: 9606]}
102-172 -30.500 49  d4r5ra_ g.20.1.1 (A:) Kistrin (rhodostomin) {Agkistrodon rhodostoma [TaxId: 8717]}
VFDB 13-103 -7.100 17  VFG000846(gi:75994477) (stcE) metalloprotease [StcE (VF0209)] [Escherichia coli O157:H7 str. EDL933]
13 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 451-750) 300 COG0516 1-266 -75.700 30  [O] KOG3607 Meltrins, fertilins and related Zn-dependent metalloproteinases of the ADAMs family
1-300 -34.600 16  [W] KOG3658 Tumor necrosis factor-alpha-converting enzyme (TACE/ADAM17) and related metalloproteases
H.sapiens 3-300 -96.700 41  sp|Q9BZ11|ADA33_HUMAN(removed signalp:1-28) Disintegrin and metalloproteinase domain-containing protein 33 OS=Homo sapiens GN=ADAM33 PE=1 SV=2 (Range: 451-750)
HGM_OVER 1-56 -5.970 18  PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;
JCSG0516 3-218 -7.260 11  HN13881A NM_016256.3 423397 Cloned-2013-04-04
NEW_HUMAN_DOMAINS 7-104 -6.890 17  sp|Q5NDL2|AER61_HUMAN Uncharacterized glycosyltransferase AER61 OS=Homo sapiens GN=AER61 PE=2 SV=1 (Range: 19-152)
PDB0516 1-227 -67.100 33  3g5c_A mol:protein length:510 ADAM 22
PfamA30U 5-250 -10.600 13  PF07243.9; GP_PTPV/282-808; Phlebovirus glycoprotein G1
27-149 -42.700 31  PF08516.10; F7FQP8_MONDO/502-619; ADAM cysteine-rich
SCOP206 1-29 -10.600 34  d2echa_ g.20.1.1 (A:) Echistatin {Saw-scaled viper (Echis carinatus) [TaxId: 40353]}
VFDB 5-177 -4.350 11  VFG002217(gi:17988378) (virB10) type IV secretion system channel protein VirB10 [VirB type IV secretion system (VF0365)] [Brucella melitensis bv. 1 str. 16M]
14 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 601-900) 300 COG0516 1-115 -36.000 21  [O] KOG3607 Meltrins, fertilins and related Zn-dependent metalloproteinases of the ADAMs family
1-250 -23.000 14  [W] KOG3658 Tumor necrosis factor-alpha-converting enzyme (TACE/ADAM17) and related metalloproteases
14-299 -12.400 [O] KOG0802 E3 ubiquitin ligase
H.sapiens 1-285 -61.900 26  sp|O43184|ADA12_HUMAN(removed signalp:1-28) Disintegrin and metalloproteinase domain-containing protein 12 OS=Homo sapiens GN=ADAM12 PE=1 SV=3 (Range: 601-881)
HGM_OVER 7-142 -4.920 10  PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;
JCSG0516 1-300 -9.980 10  SP2600M ZP_02027330.1 411361 Selected-2009-11-12
5-68 -12.200 25  HN13881A NM_016256.3 423397 Cloned-2013-04-04
123-298 -11.300 14  RF20596A.MYBBP1A BC050546 421207 Purified-2010-12-07
NEW_HUMAN_DOMAINS 5-67 -8.660 15  sp|Q96CC6|RHDF1_HUMAN Inactive rhomboid protein 1 OS=Homo sapiens GN=RHBDF1 PE=1 SV=2 (Range: 368-649)
PDB0516 1-79 -29.300 30  3g5c_A mol:protein length:510 ADAM 22
PfamA30U 5-68 -10.000 20  PF04885.11; M4CFF0_BRARP/12-161; Stigma-specific protein, Stig1
21-285 -10.000 PF05934.9; CLCC1_RAT/3-541; Mid-1-related chloride channel (MCLC)
SCOP206 1-67 -6.860 17  d1poca_ a.133.1.1 (A:) Phospholipase A2 {Honeybee (Apis mellifera) [TaxId: 7460]}
VFDB 110-300 -9.050 10  VFG000337(gi:16272928) (iga1) immunoglobin A1 protease [IgA1 protease (VF0045)] [Haemophilus influenzae Rd KW20]
15 sp|Q9H013|ADA19_HUMAN(removed signalp:1-25) Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3 (Range: 751-930) 180 COG0516 1-171 -19.700 10  [R] KOG1777 Putative Zn-finger protein
H.sapiens 6-140 -23.300 sp|Q6Y7W6|PERQ2_HUMAN PERQ amino acid-rich with GYF domain-containing protein 2 OS=Homo sapiens GN=GIGYF2 PE=1 SV=1 (Range: 151-450)
33-179 -20.000 13  sp|Q8N7K9|YS059_HUMAN Uncharacterized protein FLJ40925 OS=Homo sapiens PE=1 SV=1
HGM_OVER 134-180 -4.110 PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205;
JCSG0516 2-179 -25.300 11  RF20596A.MYBBP1A BC050546 421207 Purified-2010-12-07
NEW_HUMAN_DOMAINS 179-180 -4.450 50  sp|Q8N402|YV020_HUMAN Putative uncharacterized protein LOC388882 OS=Homo sapiens PE=2 SV=1 (Range: 97-240)
PDB0516 4-179 -13.300 3jcm_A mol:protein length:2413 Pre-mRNA-splicing factor 8
55-180 -17.200 12  5fz2_A mol:protein length:904 ENVELOPE GLYCOPROTEIN B
PfamA30U 9-180 -22.000 PF05934.9; CLCC1_RAT/3-541; Mid-1-related chloride channel (MCLC)
SCOP206 5-37 -3.380 18  d1k28a2 b.108.1.2 (A:362-576) Tail-associated lysozyme gp5, C-terminal domain {Bacteriophage T4 [TaxId: 10665]}
VFDB 2-180 -24.100 11  VFG000337(gi:16272928) (iga1) immunoglobin A1 protease [IgA1 protease (VF0045)] [Haemophilus influenzae Rd KW20]
16 sp|P11766|ADHX_HUMAN Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4 374 COG0516 6-374 -129.000 62  [C] COG1062 Zn-dependent alcohol dehydrogenases, class III
H.sapiens 2-374 -129.000 62  sp|P00326|ADH1G_HUMAN Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C PE=1 SV=2
HGM_OVER 146-284 -3.000 14  HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;
JCSG0516 6-373 -71.300 26  TM0436 TM0436 282309 PDB-2003-12-02
NEW_HUMAN_DOMAINS 34-107 -5.020 16  sp|P15918|RAG1_HUMAN V(D)J recombination-activating protein 1 OS=Homo sapiens GN=RAG1 PE=1 SV=2 (Range: 151-218)
PDB0516 1-374 -131.000 100  1mc5_A mol:protein length:374 Alcohol dehydrogenase class III chi chain
PfamA30U 32-159 -28.200 38  PF08240.10; A9CHB7_AGRFC/24-130; Alcohol dehydrogenase GroES-like domain
183-374 -18.000 17  PF16912.3; I7BJ28_NATSJ/144-370; Glucose dehydrogenase C-terminus
202-333 -21.700 21  PF00107.24; ADH_SULSO/182-311; Zinc-binding dehydrogenase
SCOP206 2-198 -88.400 54  d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}
164-339 -83.900 65  d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}
VFDB 188-368 -4.570 12  VFG005776(gi:22536834) (cylA) ABC (ATP-binding cassette) transporter CylA [Beta-hemolysin/cytolysin (CVF171)] [Streptococcus agalactiae 2603V/R]
17 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 1-300) 300 COG0516 18-299 -27.700 11  [R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)
H.sapiens 1-36 -14.800 53  sp|Q6ZNL6|FGD5_HUMAN FYVE, RhoGEF and PH domain-containing protein 5 OS=Homo sapiens GN=FGD5 PE=1 SV=3 (Range: 1-300)
31-300 -19.600 11  sp|Q9UEW3|MARCO_HUMAN Macrophage receptor MARCO OS=Homo sapiens GN=MARCO PE=1 SV=1
HGM_OVER 1-119 -5.520 11  PB069407 _HOMD.0084606_ pint_c_2_12 Prevotella intermedia 17 [3585 - 4295] ORF
JCSG0516 9-300 -18.000 SP17586C NP_439153.1 411588 Selected-2009-11-12
81-299 -20.100 RF20596A.MYBBP1A BC050546 421207 Purified-2010-12-07
NEW_HUMAN_DOMAINS 1-33 -5.750 21  sp|Q9NTI7|CA183_HUMAN Uncharacterized protein C1orf183 OS=Homo sapiens GN=C1orf183 PE=2 SV=1 (Range: 1-57)
PDB0516 1-146 -15.300 11  5fz2_A mol:protein length:904 ENVELOPE GLYCOPROTEIN B
62-219 -12.400 10  5i4d_A mol:protein length:343 Superantigen-like protein
63-300 -11.100 10  5fur_J mol:protein length:677 TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT
PfamA30U 20-205 -17.400 PF05934.9; CLCC1_RAT/3-541; Mid-1-related chloride channel (MCLC)
49-298 -17.000 PF11725.6; Q887C9_PSESM/17-1794; Pathogenicity factor
SCOP206 1-35 -5.170 20  d1bxya_ d.59.1.1 (A:) Prokaryotic ribosomal protein L30 {Thermus thermophilus [TaxId: 274]}
VFDB 9-300 -18.000 VFG000337(gi:16272928) (iga1) immunoglobin A1 protease [IgA1 protease (VF0045)] [Haemophilus influenzae Rd KW20]
18 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 151-450) 300 COG0516 1-256 -19.400 [R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)
3-288 -10.100 12  [TZ] KOG4035 Coeffector of mDia Rho GTPase, regulates actin polymerization and cell adhesion turnover
H.sapiens 4-284 -13.900 10  sp|O60320|F1891_HUMAN Protein FAM189A1 OS=Homo sapiens GN=FAM189A1 PE=2 SV=4
45-299 -14.800 14  sp|Q9H0W8|SMG9_HUMAN Protein SMG9 OS=Homo sapiens GN=SMG9 PE=1 SV=1
151-300 -27.500 100  sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 301-600)
HGM_OVER 239-299 -4.120 14  HGC00878 gi|162869432|dbj|BABB01000575.1|7.0 TMP01167;
JCSG0516 3-286 -15.500 10  RF20622A.ZCCHC8 BC065918 421231 Purified-2010-12-01
NEW_HUMAN_DOMAINS 250-300 -6.070 19  sp|Q9BX69|CARD6_HUMAN Caspase recruitment domain-containing protein 6 OS=Homo sapiens GN=CARD6 PE=1 SV=2 (Range: 448-668)
PDB0516 243-300 -22.300 44  3ihw_A mol:protein length:184 CENTG3
PfamA30U 4-291 -14.100 PF11725.6; Q887C9_PSESM/17-1794; Pathogenicity factor
SCOP206 251-300 -19.300 98  d2iwra_ c.37.1.8 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
VFDB 3-300 -13.100 11  VFG000337(gi:16272928) (iga1) immunoglobin A1 protease [IgA1 protease (VF0045)] [Haemophilus influenzae Rd KW20]
19 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 301-600) 300 COG0516 90-293 -62.700 23  [R] KOG0395 Ras-related GTPase
H.sapiens 34-294 -82.500 48  sp|Q96P47|AGAP3_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 OS=Homo sapiens GN=AGAP3 PE=1 SV=2 (Range: 1-300)
HGM_OVER 99-274 -4.180 PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;
JCSG0516 19-273 -15.100 TT0527A YP_322606.1 404770 Selected-2009-08-14
74-278 -18.300 12  TT0445A YP_001812673.1 404662 Selected-2009-08-14
107-274 -49.200 18  XB5526A 10640503 358664 Purified-2005-03-30
NEW_HUMAN_DOMAINS 101-241 -8.390 sp|Q8IVG5|SAM9L_HUMAN Sterile alpha motif domain-containing protein 9-like OS=Homo sapiens GN=SAMD9L PE=1 SV=2 (Range: 687-863)
PDB0516 101-277 -79.300 99  2bmj_A mol:protein length:178 CENTAURIN GAMMA 1
PfamA30U 108-268 -53.700 29  PF00071.20; RAB9A_CANLF/9-174; Ras family
SCOP206 101-275 -79.000 99  d2iwra_ c.37.1.8 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
VFDB 109-269 -10.900 10  VFG001845(gi:52840703) (icmF) Dot/Icm type IV secretion system protein IcmF [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
20 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 451-750) 300 COG0516 1-142 -39.500 20  [R] KOG0394 Ras-related GTPase
1-174 -30.500 22  [T] KOG4252 GTP-binding protein
1-294 -27.700 24  [T] KOG0705 GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains)
H.sapiens 17-300 -126.000 52  sp|Q96P47|AGAP3_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 OS=Homo sapiens GN=AGAP3 PE=1 SV=2 (Range: 151-450)
HGM_OVER 15-125 -4.710 PB048276 _Gut.Meta.Jp.0112258_ gi|163310311|dbj|BABD01000385.1||2 (- 258:885~0 complete)
JCSG0516 7-124 -37.200 14  XB5526A 10640503 358664 Purified-2005-03-30
NEW_HUMAN_DOMAINS 28-115 -5.800 18  sp|Q8IUC6|TCAM1_HUMAN TIR domain-containing adapter molecule 1 OS=Homo sapiens GN=TICAM1 PE=1 SV=1 (Range: 1-150)
PDB0516 1-127 -64.700 100  2bmj_A mol:protein length:178 CENTAURIN GAMMA 1
PfamA30U 1-118 -38.900 25  PF00071.20; RAB9A_CANLF/9-174; Ras family
SCOP206 1-125 -64.700 100  d2iwra_ c.37.1.8 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
1-155 -29.100 14  d3gj0a1 c.37.1.8 (A:2-207) automated matches {Human (Homo sapiens) [TaxId: 9606]}
VFDB 5-116 -4.860 14  VFG007188(gi:28901196) (vscT2) type III secretion system C-ring protein VscT2 [T3SS2 (VF0409)] [Vibrio parahaemolyticus RIMD 2210633]


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Slabinski L, Jaroszewski L, Rychlewski L, Wilson IA, Lesley SA, Godzik A. XtalPred: a web server for prediction of protein crystallizability. Bioinformatics. 2007 Dec 15;23(24):3403-5. Epub 2007 Oct 5.