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# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15604718|ref|NP_219502.1| hypothetical protein (CT875) [Chlamydia trachomatis D/UW-3/CX] 591 COG0516 1-591 -6.140 14  [O] COG2844 UTP:GlnB (protein PII) uridylyltransferase
H.sapiens 215-339 -5.600 20  sp|A6NGS2|CS069_HUMAN Uncharacterized protein C19orf69 OS=Homo sapiens GN=C19orf69 PE=2 SV=2
HGM_OVER 122-310 -3.930 13  PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276;
JCSG0516 1-389 -6.310 14  TM0231 TM0231 282110 PDB-2002-08-29
NEW_HUMAN_DOMAINS 451-554 -6.540 27  sp|O75376|NCOR1_HUMAN Nuclear receptor corepressor 1 OS=Homo sapiens GN=NCOR1 PE=1 SV=2 (Range: 1545-1626)
PDB0516 1-389 -6.360 14  1j6u_A mol:protein length:469 UDP-N-acetylmuramate-alanine ligase MurC
PfamA30U 392-444 -5.530 22  PF01194.15; RPON_METLZ/1-58; RNA polymerases N / 8 kDa subunit
SCOP206 505-588 -6.790 14  d3ceia1 a.2.11.0 (A:1-84) automated matches {Helicobacter pylori [TaxId: 210]}
VFDB 60-586 -4.870 11  VFG000938(gi:26249460) (iucC) aerobactin siderophore biosynthesis protein IucC [Aerobactin (VF0229)] [Escherichia coli CFT073]
2 gi|15604719|ref|NP_219503.1| hypothetical protein (CT001) [Chlamydia trachomatis D/UW-3/CX] 90 COG0516 3-73 -45.400 24  [S] COG2155 Uncharacterized conserved protein
H.sapiens 3-86 -10.000 sp|Q9Y698|CCG2_HUMAN(removed signalp:1-27) Voltage-dependent calcium channel gamma-2 subunit OS=Homo sapiens GN=CACNG2 PE=2 SV=1
HGM_OVER 1-63 -6.170 PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;
JCSG0516 10-64 -7.990 C.LS21372A NP_421772.1 430505 Selected-2011-09-02
NEW_HUMAN_DOMAINS 28-59 -7.030 21  sp|A1A5C7|S22AN_HUMAN Solute carrier family 22 member 23 OS=Homo sapiens GN=SLC22A23 PE=2 SV=2 (Range: 79-162)
PDB0516 2-49 -8.120 12  4x5m_A mol:protein length:100 Uncharacterized protein
PfamA30U 4-63 -39.400 20  PF04070.10; R5JWM3_9CLOT/4-61; Domain of unknown function (DUF378 topsan)
SCOP206 3-52 -7.450 16  d1k3ka_ f.1.4.1 (A:) Bcl-2 homolog {Kaposi`s sarcoma-associated herpesvirus [TaxId: 37296]}
VFDB 3-63 -7.110 15  VFG017059(gi:15604954) (incC) Inclusion Membrane Protein C [Type III secretion apparatus and effectors (CVF619)] [Chlamydia trachomatis D/UW-3/CX]
3 gi|15604720|ref|NP_219504.1| aspartyl/glutamyl-tRNA amidotransferase subunit C (CT002) [Chlamydia trachomatis D/UW-3/CX] 100 COG0516 3-100 -58.100 21  [J] COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit
H.sapiens 4-97 -40.900 19  sp|O43716|GATCL_HUMAN GatC-like protein OS=Homo sapiens GN=GATC PE=1 SV=1
HGM_OVER 2-92 -3.680 14  PB012108 A3U600_9FLAO/1-189 PB012108; Pfam-B_12108;
JCSG0516 3-100 -58.500 25  TB4913D 10173279 356740 Purified-2004-05-26
NEW_HUMAN_DOMAINS 1-55 -5.420 12  sp|Q9NZJ4|SACS_HUMAN Sacsin OS=Homo sapiens GN=SACS PE=1 SV=2 (Range: 1577-1701)
PDB0516 3-100 -57.800 26  2df4_C mol:protein length:100 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransfer
PfamA30U 23-95 -39.500 15  PF02686.13; F0SQ10_RUBBR/21-91; Glu-tRNAGln amidotransferase C subunit
SCOP206 5-98 -56.500 27  d3ip4c_ a.137.12.1 (C:) Glu-tRNAGln amidotransferase C subunit, GatC {Staphylococcus aureus [TaxId: 158878]}
VFDB 5-59 -5.440 14  VFG000401(gi:16082739) (yscB) chaperone for YopN [TTSS (VF0140)] [Yersinia pestis CO92]
4 gi|15604721|ref|NP_219505.1| aspartyl/glutamyl-tRNA amidotransferase subunit A (CT003) [Chlamydia trachomatis D/UW-3/CX] 491 COG0516 1-480 -152.000 42  [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
H.sapiens 1-491 -151.000 39  sp|Q9H0R6|QRSL1_HUMAN Glutamyl-tRNA(Gln) amidotransferase subunit A homolog OS=Homo sapiens GN=QRSL1 PE=1 SV=2
HGM_OVER 266-395 -2.950 PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;
JCSG0516 1-485 -149.000 43  TM1272 TM1272 283137 PDB-2006-03-28
NEW_HUMAN_DOMAINS 124-270 -5.040 10  tr|F8VZC6|F8VZC6_HUMAN Uncharacterized protein OS=Homo sapiens GN=PMEL PE=4 SV=1 (Range: 25-162)
PDB0516 1-481 -154.000 44  2df4_A mol:protein length:485 Glutamyl-tRNA(Gln) amidotransferase subunit A
PfamA30U 22-462 -42.900 21  PF01425.19; AMDS_ASPOR/74-533; Amidase
SCOP206 1-485 -149.000 43  d2gi3a1 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransferase subunit A {Thermotoga maritima [TaxId: 2336]}
VFDB 160-470 -4.750 12  VFG001381(gi:57116734) (icl) Isocitrate lyase Icl (isocitrase) (isocitratase) [Isocitrate lyase (VF0253)] [Mycobacterium tuberculosis H37Rv]
5 gi|15604722|ref|NP_219506.1| aspartyl/glutamyl-tRNA amidotransferase subunit B (CT004) [Chlamydia trachomatis D/UW-3/CX] 488 COG0516 1-488 -158.000 38  [J] COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog)
H.sapiens 1-486 -151.000 31  sp|O75879|GATB_HUMAN Probable glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial OS=Homo sapiens GN=PET112L PE=1 SV=1
HGM_OVER 151-336 -2.470 12  HGC00422 gi|163631722|dbj|BABG01004545.1|2.0 TMP00397;
JCSG0516 6-486 -163.000 39  TM1273 TM1273 283138 Purified-2004-09-17
NEW_HUMAN_DOMAINS 162-229 -5.470 15  sp|Q49AJ0|F135B_HUMAN Protein FAM135B OS=Homo sapiens GN=FAM135B PE=2 SV=2 (Range: 1331-1406)
PDB0516 6-487 -166.000 41  2df4_B mol:protein length:483 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransfer
PfamA30U 11-297 -128.000 43  PF02934.13; Q11V48_CYTH3/11-295; GatB/GatE catalytic domain
336-485 -64.400 42  PF02637.16; GATB_GEOKA/326-473; GatB domain
SCOP206 9-304 -133.000 48  d2f2ab2 d.128.1.5 (B:4-293) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, N-terminal domain {Staphylococcus aureus [TaxId: 1280]}
305-424 -54.500 21  d2f2ab1 a.182.1.2 (B:294-411) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
VFDB 391-486 -5.530 13  VFG045566(gi:52842569) (lpg2359) Dot/Icm type IV secretion system effector [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
6 gi|15604723|ref|NP_219507.1| hypothetical protein (CT005) [Chlamydia trachomatis D/UW-3/CX] 363 COG0516 40-138 -8.970 19  [S] COG4684 Predicted membrane protein
H.sapiens 32-363 -10.200 11  sp|O95180|CAC1H_HUMAN Voltage-dependent T-type calcium channel subunit alpha-1H OS=Homo sapiens GN=CACNA1H PE=1 SV=4 (Range: 901-1200)
HGM_OVER 38-156 -7.100 16  HGC00690 gi|162868815|dbj|BABB01001192.1|3.0 TMP00870;
JCSG0516 16-147 -8.890 10  TM1016 TM1016 282883 Purified-2001-10-30
NEW_HUMAN_DOMAINS 58-145 -6.280 20  sp|Q9NR09|BIRC6_HUMAN Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=2 (Range: 4156-4254)
PDB0516 15-138 -9.340 20  4rfs_S mol:protein length:203 Substrate binding pritein S
PfamA30U 4-148 -9.750 11  PF02632.12; D1YVH9_METPS/34-176; BioY family
SCOP206 40-125 -6.910 16  d2h88d_ f.21.2.2 (D:) automated matches {Chicken (Gallus gallus) [TaxId: 9031]}
VFDB 31-169 -7.330 18  VFG000506(gi:16764755) (sseG) type III secretion system effector SseG [TTSS(SPI-2 encode) (VF0321)] [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
7 gi|15604724|ref|NP_219508.1| hypothetical protein (CT006) [Chlamydia trachomatis D/UW-3/CX] 189 COG0516 28-164 -7.610 13  [S] COG4682 Predicted membrane protein
H.sapiens 18-189 -10.400 11  sp|Q99442|SEC62_HUMAN Translocation protein SEC62 OS=Homo sapiens GN=SEC62 PE=1 SV=1
HGM_OVER 39-124 -4.730 19  HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636;
JCSG0516 114-188 -8.050 13  SP2008O YP_001272213.1 411946 Purified-2010-11-20
NEW_HUMAN_DOMAINS 21-185 -6.970 11  sp|Q32MH5|K1370_HUMAN Uncharacterized protein KIAA1370 OS=Homo sapiens GN=KIAA1370 PE=2 SV=2 (Range: 1-240)
PDB0516 29-140 -8.540 11  2ksr_A mol:protein length:164 Neuronal acetylcholine receptor subunit beta-
PfamA30U 18-161 -8.930 11  PF03839.14; U3IKN1_ANAPL/87-308; Translocation protein Sec62
SCOP206 49-140 -6.630 11  d1oedc_ f.36.1.1 (C:) Acetylcholine receptor protein, delta chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}
VFDB 21-189 -6.280 10  VFG001850(gi:52842892) (dotA) Dot/Icm type IV secretion system protein DotA [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
8 gi|15604725|ref|NP_219509.1| hypothetical protein (CT007) [Chlamydia trachomatis D/UW-3/CX] 316 COG0516 1-316 -20.800 [M] COG4571 Outer membrane protease
H.sapiens 16-315 -6.420 sp|Q9Y277|VDAC3_HUMAN Voltage-dependent anion-selective channel protein 3 OS=Homo sapiens GN=VDAC3 PE=1 SV=1
HGM_OVER 172-316 -7.640 10  PB004718 Q5LIA4_BACFN/1-189 PB004718; Pfam-B_4718;
JCSG0516 1-316 -22.200 SP17630A YP_974886.1 412362 Purified-2010-09-29
NEW_HUMAN_DOMAINS 41-290 -5.520 sp|Q9NVH1|DJC11_HUMAN DnaJ homolog subfamily C member 11 OS=Homo sapiens GN=DNAJC11 PE=1 SV=2 (Range: 128-409)
PDB0516 3-316 -14.300 1t16_A mol:protein length:427 Long-chain fatty acid transport protein
36-316 -22.400 2f1c_X mol:protein length:286 Outer membrane protein G
PfamA30U 1-316 -26.600 PF09381.8; OMPG_ECOLI/1-301; Outer membrane protein G (OmpG)
SCOP206 3-316 -14.300 d3pgsa1 f.4.3.4 (A:1-421) automated matches {Escherichia coli K-12 [TaxId: 83333]}
42-316 -17.100 d2vdfa_ f.4.4.2 (A:) Outer membrane adhesin/invasin OpcA {Neisseria meningitidis [TaxId: 487]}
VFDB 1-316 -24.100 VFG000240(gi:15676939) (opc) class 5 outer membrane protein [Opc (VF0077)] [Neisseria meningitidis MC58]
9 gi|15604726|ref|NP_219510.1| ribonuclease HIII (CT008) [Chlamydia trachomatis D/UW-3/CX] 300 COG0516 4-299 -103.000 23  [L] COG1039 Ribonuclease HIII
H.sapiens 62-299 -57.700 18  sp|O75792|RNH2A_HUMAN Ribonuclease H2 subunit A OS=Homo sapiens GN=RNASEH2A PE=1 SV=2
HGM_OVER 122-271 -2.870 HGC00150 gi|162733542|dbj|BAAZ01030454.1|1.0 TMP01074;
JCSG0516 62-299 -57.700 18  MA16104A NP_006388.2 400400 Purified-2009-03-13
NEW_HUMAN_DOMAINS 90-253 -5.770 14  sp|Q5TH69|BIG3_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo sapiens GN=ARFGEF3 PE=1 SV=3 (Range: 296-445)
PDB0516 3-300 -102.000 26  2d0a_A mol:protein length:310 ribonuclease HIII
PfamA30U 4-79 -27.900 16  PF11858.6; RNH3_OCEIH/3-77; Domain of unknown function (DUF3378 topsan)
89-291 -58.800 17  PF01351.16; RNH2A_SCHPO/66-277; Ribonuclease HII
SCOP206 88-297 -59.400 26  d1i39a_ c.55.3.1 (A:) Class II ribonuclease H (RNase HII) {Archaeoglobus fulgidus [TaxId: 2234]}
VFDB 88-282 -5.030 12  VFG002382(gi:15611006) (eccCa1) ESX-1 type VII secretion system FtsK/SpoIIIE family protein EccCa1 [ESX-1 (VF0315)] [Mycobacterium tuberculosis H37Rv]
10 gi|15604727|ref|NP_219511.1| HTH transcriptional regulator (CT009) [Chlamydia trachomatis D/UW-3/CX] 143 COG0516 1-138 -48.900 24  [S] COG1426 Uncharacterized protein conserved in bacteria
H.sapiens 10-72 -13.700 17  sp|O60869|EDF1_HUMAN Endothelial differentiation-related factor 1 OS=Homo sapiens GN=EDF1 PE=1 SV=1
HGM_OVER 2-105 -4.510 16  PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791;
JCSG0516 5-137 -43.900 27  TM1864 TM1864 283716 Purified-2001-11-28
NEW_HUMAN_DOMAINS 29-82 -5.230 14  tr|B1AKM8|B1AKM8_HUMAN Phosphatidylserine decarboxylase (Fragment) OS=Homo sapiens GN=PISD PE=4 SV=1 (Range: 1-130)
PDB0516 9-136 -52.000 20  3fym_A mol:protein length:130 Putative uncharacterized protein
PfamA30U 13-83 -38.200 25  PF12844.5; Q03EQ2_PEDPA/10-80; Helix-turn-helix domain
SCOP206 2-89 -15.400 18  d3vk0a_ a.35.1.0 (A:) automated matches {Neisseria meningitidis [TaxId: 122586]}
VFDB 12-77 -9.360 16  VFG045470(gi:21693300) (cylR2) cytolysin regulator R2 [Cytolysin (VF0356)] [Enterococcus faecalis str. MMH594]
11 gi|15604728|ref|NP_219512.1| lipid A biosynthesis lauroyl acyltransferase (CT010) [Chlamydia trachomatis D/UW-3/CX] 455 COG0516 2-332 -73.600 19  [M] COG1560 Lauroyl/myristoyl acyltransferase
H.sapiens 135-306 -8.620 12  sp|O15120|PLCB_HUMAN(removed signalp:1-23) 1-acyl-sn-glycerol-3-phosphate acyltransferase beta OS=Homo sapiens GN=AGPAT2 PE=1 SV=1
HGM_OVER 278-454 -4.860 10  PB046158 _JGI.0336690_ 2004028347 [Human Gut Community Subject 8]
JCSG0516 6-326 -83.500 26  RH6159D AFE_2790 416369 Selected-2009-12-04
13-359 -71.300 17  RH6159E YP_001712836.1 415443 Selected-2009-12-04
NEW_HUMAN_DOMAINS 203-455 -5.090 sp|A6NHR9|SMHD1_HUMAN Structural maintenance of chromosomes flexible hinge domain-containing protein 1 OS=Homo sapiens GN=SMCHD1 PE=1 SV=2 (Range: 471-1300)
PDB0516 10-330 -63.000 16  5f2t_A mol:protein length:308 Phosphatidylinositol mannoside acyltransferas
PfamA30U 5-316 -62.100 20  PF03279.11; LPXL_HAEIN/6-300; Bacterial lipid A biosynthesis acyltransferase
SCOP206 123-309 -8.340 10  d1iuqa1 c.112.1.1 (A:4-368) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]}
VFDB 11-324 -79.700 19  VFG002025(gi:15792459) (htrB) lipid A biosynthesis lauroyl acyltransferase [LOS (VF0326)] [Campylobacter jejuni subsp. jejuni NCTC 11168]
12 gi|15604729|ref|NP_219513.1| hypothetical protein (CT011) [Chlamydia trachomatis D/UW-3/CX] 418 COG0516 4-417 -51.000 10  [S] COG4856 Uncharacterized protein conserved in bacteria
H.sapiens 67-256 -7.040 sp|Q9Y2L5|TPPC8_HUMAN Trafficking protein particle complex subunit 8 OS=Homo sapiens GN=TRAPPC8 PE=1 SV=2 (Range: 751-1050)
HGM_OVER 8-170 -3.990 PB048631 gi|160885545|ref|ZP_02066548.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]gi|156109167|gb|EDO10912.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]
JCSG0516 4-418 -61.000 10  SP17805B ZP_02432145.1 410267 Selected-2009-11-12
NEW_HUMAN_DOMAINS 67-418 -7.510 sp|P04114|APOB_HUMAN Apolipoprotein B-100 OS=Homo sapiens GN=APOB PE=1 SV=2 (Range: 3659-4143)
PDB0516 30-251 -36.800 4qdy_A mol:protein length:227 conserved hypothetical protein
PfamA30U 142-226 -17.200 18  PF07949.10; Q63H46_BACCZ/240-319; YbbR-like protein
SCOP206 121-224 -5.190 d3rlfa2 b.40.6.3 (A:236-371) Maltose transport protein MalK, C-terminal domain {Escherichia coli [TaxId: 562]}
VFDB 1-191 -5.540 VFG000183(gi:15598300) (xcpP) secretion protein XcpP [xcp secretion system (VF0084)] [Pseudomonas aeruginosa PAO1]
13 gi|15604730|ref|NP_219514.1| hypothetical protein (CT012) [Chlamydia trachomatis D/UW-3/CX] 264 COG0516 3-256 -105.000 32  [S] COG1624 Uncharacterized conserved protein
H.sapiens 138-257 -7.880 10  sp|A7E2V4|K0913_HUMAN Zinc finger SWIM domain-containing protein KIAA0913 OS=Homo sapiens GN=KIAA0913 PE=1 SV=1 (Range: 151-450)
HGM_OVER 105-216 -4.870 PB004996 Q5NNS6_ZYMMO/1-150 PB004996; Pfam-B_4996;
JCSG0516 106-257 -32.100 21  TM0200 TM0200 282080 Diffraction|HSQC-2008-01-29
NEW_HUMAN_DOMAINS 124-257 -7.450 sp|Q9P217|ZSWM5_HUMAN Zinc finger SWIM domain-containing protein 5 OS=Homo sapiens GN=ZSWIM5 PE=2 SV=2 (Range: 178-458)
PDB0516 43-232 -82.100 32  2fb5_A mol:protein length:205 hypothetical Membrane Spanning Protein
78-256 -83.500 35  4rv7_A mol:protein length:192 Diadenylate cyclase
PfamA30U 109-230 -68.100 39  PF02457.14; Q3A5V7_PELCD/116-235; DisA bacterial checkpoint controller nucleotide-binding
SCOP206 43-232 -80.800 32  d2fb5a1 d.320.1.1 (A:5-205) Hypothetical protein BC4920 (YojJ) {Bacillus cereus [TaxId: 1396]}
VFDB 122-225 -5.020 15  VFG001397(gi:15609168) (hspX) Heat shock protein HspX (alpha-crystallin homolog) (14 kDa antigen) (HSP16.3) [HspX (VF0301)] [Mycobacterium tuberculosis H37Rv]
14 gi|15604731|ref|NP_219515.1| cytochrome d ubiquinol oxidase subunit I (CT013) [Chlamydia trachomatis D/UW-3/CX] 446 COG0516 1-445 -125.000 31  [C] COG1271 Cytochrome bd-type quinol oxidase, subunit 1
H.sapiens 24-169 -6.610 16  sp|Q9Y345|SC6A5_HUMAN Sodium- and chloride-dependent glycine transporter 2 OS=Homo sapiens GN=SLC6A5 PE=1 SV=3 (Range: 601-797)
HGM_OVER 383-446 -3.810 14  PB062605 Q9F6T7_BACTN/1-105 PB062605; Pfam-B_62605;
JCSG0516 19-146 -5.880 17  C.JNH21312M NP_295078.1 430143 Selected-2013-07-30
NEW_HUMAN_DOMAINS 32-174 -6.660 13  sp|Q92665|RT31_HUMAN 28S ribosomal protein S31, mitochondrial OS=Homo sapiens GN=MRPS31 PE=1 SV=3 (Range: 254-395)
PDB0516 1-445 -114.000 28  5doq_A mol:protein length:448 Bd-type quinol oxidase subunit I
PfamA30U 6-435 -119.000 29  PF01654.15; D7BPD8_ARCHD/6-476; Cytochrome bd terminal oxidase subunit I
SCOP206 79-157 -7.200 12  d1oz2a2 b.34.9.3 (A:314-421) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]}
VFDB 35-181 -4.960 15  VFG001357(gi:15901997) (cbpA) choline binding protein A [CbpA/PspC (VF0150)] [Streptococcus pneumoniae TIGR4]
15 gi|15604732|ref|NP_219516.1| cytochrome d ubiquinol oxidase subunit II (CT014) [Chlamydia trachomatis D/UW-3/CX] 353 COG0516 8-353 -102.000 30  [C] COG1294 Cytochrome bd-type quinol oxidase, subunit 2
H.sapiens 9-203 -8.190 10  sp|P48067|SC6A9_HUMAN Sodium- and chloride-dependent glycine transporter 1 OS=Homo sapiens GN=SLC6A9 PE=2 SV=3 (Range: 451-706)
HGM_OVER 47-138 -3.220 10  HGC00422 gi|163631722|dbj|BABG01004545.1|2.0 TMP00397;
JCSG0516 27-353 -6.910 WT3819A.HTATSF1 BC009896 422557 Selected-2010-11-11
NEW_HUMAN_DOMAINS 39-92 -4.960 14  sp|Q5HYC2|K2026_HUMAN Uncharacterized protein KIAA2026 OS=Homo sapiens GN=KIAA2026 PE=2 SV=2 (Range: 1809-1944)
PDB0516 8-348 -68.600 17  5doq_B mol:protein length:342 Bd-type quinol oxidase subunit II
PfamA30U 9-343 -113.000 26  PF02322.13; C6X9F9_METGS/10-365; Cytochrome bd terminal oxidase subunit II
SCOP206 36-121 -6.210 12  d2joda1 g.76.1.1 (A:22-122) Pituitary adenylate cyclase-activating polypeptide type I receptor {Human (Homo sapiens) [TaxId: 9606]}
VFDB 12-340 -5.490 13  VFG032992(gi:16803331) (oatA) peptidoglycan O-acetyltransferase [OatA (VF0441)] [Listeria monocytogenes EGD-e]
16 gi|15604733|ref|NP_219517.1| ATPase (CT015) [Chlamydia trachomatis D/UW-3/CX] 434 COG0516 1-434 -124.000 30  [T] COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH
H.sapiens 1-168 -34.100 17  sp|Q5T5J6|CA026_HUMAN Uncharacterized protein C1orf26 OS=Homo sapiens GN=C1orf26 PE=2 SV=1 (Range: 301-600)
116-434 -13.300 16  sp|Q08AF3|SLFN5_HUMAN Schlafen family member 5 OS=Homo sapiens GN=SLFN5 PE=1 SV=1 (Range: 451-750)
226-429 -13.400 18  sp|Q9BYK8|PR285_HUMAN Peroxisomal proliferator-activated receptor A-interacting complex 285 kDa protein OS=Homo sapiens GN=PRIC285 PE=1 SV=6 (Range: 451-750)
HGM_OVER 253-433 -2.850 HGC00044 gi|162658718|dbj|BAAX01000887.1|1.0 TMP00920;
JCSG0516 3-434 -132.000 44  PL0495B YP_384263.1 401476 Purified-2009-08-27
NEW_HUMAN_DOMAINS 232-271 -4.410 15  sp|Q6P2S7|GNN_HUMAN Tetratricopeptide repeat protein GNN OS=Homo sapiens GN=GNN PE=2 SV=3 (Range: 217-335)
PDB0516 2-140 -34.200 19  2dok_A mol:protein length:186 Telomerase-binding protein EST1A
222-422 -50.400 32  3b85_A mol:protein length:208 Phosphate starvation-inducible protein
PfamA30U 5-138 -53.800 23  PF13638.4; D2R0J2_PIRSD/11-151; PIN domain
222-428 -50.100 31  PF02562.14; A0LK93_SYNFM/124-328; PhoH-like protein
SCOP206 101-423 -13.500 13  d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
VFDB 241-434 -8.710 13  VFG000109(gi:15641469) (zot) zona occludens toxin [Zot (VF0129)] [Vibrio cholerae O1 biovar El Tor str. N16961]
17 gi|15604734|ref|NP_219518.1| hypothetical protein (CT016) [Chlamydia trachomatis D/UW-3/CX] 242 COG0516 178-239 -6.930 20  [S] COG5431 Uncharacterized metal-binding protein
H.sapiens 127-228 -9.770 18  sp|Q9P0M4|IL17C_HUMAN(removed signalp:1-18) Interleukin-17C OS=Homo sapiens GN=IL17C PE=2 SV=1
174-240 -11.800 25  sp|Q8NEG5|ZSWM2_HUMAN E3 ubiquitin-protein ligase ZSWIM2 OS=Homo sapiens GN=ZSWIM2 PE=1 SV=2 (Range: 1-300)
HGM_OVER 44-215 -3.960 12  PB012386 gi|82541244|ref|XP_724876.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii str. 17XNL]gi|23479680|gb|EAA16441.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii]
JCSG0516 117-226 -7.480 17  RH12835A NP_951781.1 416445 Selected-2009-12-04
NEW_HUMAN_DOMAINS 186-240 -8.800 20  sp|Q13233|M3K1_HUMAN Mitogen-activated protein kinase kinase kinase 1 OS=Homo sapiens GN=MAP3K1 PE=1 SV=4 (Range: 306-389)
PDB0516 126-236 -9.450 20  4hr9_A mol:protein length:122 Interleukin-17A
PfamA30U 148-228 -8.410 21  PF06083.9; G3VTK4_SARHA/102-190; Interleukin-17
SCOP206 136-231 -7.880 17  d1jpya_ g.17.1.6 (A:) Interleukin 17F, IL-17F {Human (Homo sapiens) [TaxId: 9606]}
VFDB 141-240 -6.910 12  VFG041030(gi:15597041) (tse1) type VI secretion system effector Tse1, peptidoglycanhydrolase [HSI-1 (Hcp-secretion island 1) (SS178)] [Pseudomonas aeruginosa PAO1]
18 gi|15604735|ref|NP_219519.1| hypothetical protein (CT017) [Chlamydia trachomatis D/UW-3/CX] 433 COG0516 31-251 -40.200 11  [S] COG4991 Uncharacterized protein with a bacterial SH3 domain homologue
51-431 -16.200 10  [S] KOG2995 FOG: SH3 domain
H.sapiens 20-177 -40.200 13  sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3 (Range: 2401-2700)
51-429 -15.700 14  sp|Q6XZF7|DNMBP_HUMAN Dynamin-binding protein OS=Homo sapiens GN=DNMBP PE=1 SV=1 (Range: 1-300)
61-329 -19.400 11  sp|A1X283|SPD2B_HUMAN SH3 and PX domain-containing protein 2B OS=Homo sapiens GN=SH3PXD2B PE=1 SV=3 (Range: 151-450)
HGM_OVER 40-160 -6.150 14  PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;
JCSG0516 1-431 -30.500 12  PX5305A NP_979181.1 395636 PDB-2009-04-17
27-425 -61.000 11  SP5305BV YP_001087626.1 409999 Purified-2010-09-29
NEW_HUMAN_DOMAINS 80-156 -16.800 14  tr|F8WA13|F8WA13_HUMAN Uncharacterized protein OS=Homo sapiens GN=MYCBP2 PE=4 SV=1 (Range: 1-90)
PDB0516 27-417 -31.200 11  3h41_A mol:protein length:311 NLP/P60 family protein
PfamA30U 42-96 -13.500 23  PF06347.11; Q2YQQ5_BRUA2/49-105; Bacterial SH3 domain
101-169 -17.200 17  PF08239.9; E9IE92_SOLIN/305-375; Bacterial SH3 domain
SCOP206 36-157 -37.500 15  d1xova1 b.34.11.4 (A:181-314) Endolysin Ply, C-terminal domain {Bacteriophage Psa [TaxId: 171618]}
VFDB 4-156 -13.800 15  VFG002159(gi:16803116) (aut) autolysin [Auto (VF0348)] [Listeria monocytogenes EGD-e]
9-306 -11.600 13  VFG000078(gi:16804596) (ami) autolysin amidase, adhesin [Ami (VF0071)] [Listeria monocytogenes EGD-e]
19 gi|15604736|ref|NP_219520.1| hypothetical protein (CT018) [Chlamydia trachomatis D/UW-3/CX] 157 COG0516 26-157 -6.910 12  [K] KOG0794 CDK8 kinase-activating protein cyclin C
H.sapiens 17-157 -9.540 sp|Q9H330|CI005_HUMAN Transmembrane protein C9orf5 OS=Homo sapiens GN=C9orf5 PE=1 SV=2 (Range: 601-900)
HGM_OVER 29-108 -4.740 13  PB053244 _HOMD.0087087_ pint_c_2_2642 Prevotella intermedia 17 [158005 - 157583] (REVERSE SENSE) ORF
JCSG0516 9-115 -6.670 15  TM0890 TM0890 282759 Selected-2001-10-12
NEW_HUMAN_DOMAINS 48-118 -6.760 13  sp|Q16549|PCSK7_HUMAN Proprotein convertase subtilisin/kexin type 7 OS=Homo sapiens GN=PCSK7 PE=1 SV=2 (Range: 621-706)
PDB0516 17-103 -7.100 3sb4_A mol:protein length:329 Hypothetical leucine rich repeat protein
PfamA30U 26-115 -6.530 15  PF02654.13; K8GFP9_9CYAN/25-259; Cobalamin-5-phosphate synthase
SCOP206 3-110 -6.340 15  d1xhka_ d.14.1.10 (A:) ATP-dependent protease Lon (La), catalytic domain {Methanococcus jannaschii [TaxId: 2190]}
VFDB 24-121 -5.470 15  VFG034880(gi:15804911) (espX6) Type III secretion system effector EspX6 [LEE encoded T3SS (SS020)] [Escherichia coli O157:H7 str. EDL933]
20 gi|15604737|ref|NP_219521.1| isoleucyl-tRNA synthetase (CT019) [Chlamydia trachomatis D/UW-3/CX] (Range: 1-500) 500 COG0516 2-482 -76.000 27  [J] COG0060 Isoleucyl-tRNA synthetase
H.sapiens 2-297 -107.000 54  sp|P41252|SYIC_HUMAN Isoleucyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=IARS PE=1 SV=2 (Range: 1-300)
149-442 -104.000 51  sp|P41252|SYIC_HUMAN Isoleucyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=IARS PE=1 SV=2 (Range: 151-450)
298-500 -71.000 54  sp|P41252|SYIC_HUMAN Isoleucyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=IARS PE=1 SV=2 (Range: 301-600)
HGM_OVER 185-314 -2.850 12  PB039305 _Gut.Meta.Jp.0057508_ gi|162726131|dbj|BAAY01002830.1||2 (- 1092:1581~0 complete)
JCSG0516 2-486 -75.900 30  TM1361 TM1361 283222 Selected-2001-10-12
NEW_HUMAN_DOMAINS 9-83 -5.610 20  sp|Q6L8Q7|PDE12_HUMAN 2`,5`-phosphodiesterase 12 OS=Homo sapiens GN=PDE12 PE=1 SV=2 (Range: 125-198)
PDB0516 5-500 -126.000 42  1ile_A mol:protein length:821 ISOLEUCYL-TRNA SYNTHETASE
PfamA30U 18-465 -43.700 23  PF00133.20; SYV_YEAST/156-780; tRNA synthetases class I (I, L, M and V)
SCOP206 5-500 -67.700 46  d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]}
VFDB 1-493 -4.490 12  VFG002033(gi:13507880) (p1/MgPa/gapA) ADP1_MYCPN adhesin P1 [Cytadherence organelle (VF0330)] [Mycoplasma pneumoniae M129]


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Li W, Jaroszewski L, Godzik A. Clustering of highly homologous sequences to reduce the size of large protein databases. Bioinformatics. 2001 Mar;17(3):282-3.