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Shows best template from each database, and all templates with significant scores covering different query fragments

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# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15922991|ref|NP_370525.1| chromosomal replication initiation protein (SAV0001) [Staphylococcus aureus subsp. aureus Mu50] 453 JCSG0516 2-451 -128.000 30  C.LS21333A NP_418828.1 430427 Purified-2014-07-08
2 gi|15922992|ref|NP_370526.1| DNA polymerase III subunit beta (SAV0002) [Staphylococcus aureus subsp. aureus Mu50] 377 JCSG0516 1-376 -110.000 40  XB5465A NP_344555.1 358603 PDB-2005-08-31
3 gi|15922993|ref|NP_370527.1| hypothetical protein (SAV0003) [Staphylococcus aureus subsp. aureus Mu50] 81 JCSG0516 14-63 -13.500 28  SP0223F ZP_04009405.1 413831 Purified-2010-09-29
4 gi|15922994|ref|NP_370528.1| recombination protein F (SAV0004) [Staphylococcus aureus subsp. aureus Mu50] 370 JCSG0516 1-360 -22.700 15  NT12358C DHAF_12NOV03_CONTIG1086_REVISED_GENE3509 378730 Purified-2008-01-24
5 gi|15922995|ref|NP_370529.1| DNA gyrase subunit B (SAV0005) [Staphylococcus aureus subsp. aureus Mu50] 644 JCSG0516 12-644 -200.000 53  TM0833 TM0833 282703 Purified-2005-04-05
6 gi|15922996|ref|NP_370530.1| DNA gyrase subunit A (SAV0006) [Staphylococcus aureus subsp. aureus Mu50] 889 JCSG0516 6-812 -199.000 45  TM1084 TM1084 282951 Purified-2001-04-24
7 gi|15922997|ref|NP_370531.1| hypothetical protein (SAV0007) [Staphylococcus aureus subsp. aureus Mu50] 276 JCSG0516 5-276 -103.000 45  RK10657A NP_815490.1 375213 PDB-2007-08-29
8 gi|161375866|ref|NP_370532.2| histidine ammonia-lyase (SAV0008) [Staphylococcus aureus subsp. aureus Mu50] 504 JCSG0516 2-442 -5.080 13  TM1719 TM1719 283575 Purified-2004-02-02
9 gi|15922999|ref|NP_370533.1| seryl-tRNA synthetase (SAV0009) [Staphylococcus aureus subsp. aureus Mu50] 428 JCSG0516 1-419 -136.000 52  TM1379 TM1379 283240 Crystal|NMR-2004-06-10
10 gi|15923000|ref|NP_370534.1| hypothetical protein (SAV0010) [Staphylococcus aureus subsp. aureus Mu50] 231 JCSG0516 68-161 -7.010 17  SP17608A YP_975320.1 412340 Selected-2009-11-12
11 gi|15923001|ref|NP_370535.1|(removed signalp:1-29) hypothetical protein (SAV0011) [Staphylococcus aureus subsp. aureus Mu50] 80 JCSG0516 52-80 -6.410 10  SP19357A YP_002937542.1 411112 Purified-2010-09-29
12 gi|15923002|ref|NP_370536.1| putative homoserine-o-acetyltransferase (SAV0012) [Staphylococcus aureus subsp. aureus Mu50] 329 JCSG0516 28-329 -26.700 16  SP4101A YP_001714613.1 406330 PDB-2014-02-05
13 gi|15923003|ref|NP_370537.1| hypothetical protein (SAV0013) [Staphylococcus aureus subsp. aureus Mu50] 331 JCSG0516 115-184 -8.780 SP2485D NP_371294.1 413704 Crystal|NMR-2012-02-26
14 gi|15923004|ref|NP_370538.1|(removed signalp:1-32) hypothetical protein (SAV0014) [Staphylococcus aureus subsp. aureus Mu50] 623 JCSG0516 294-623 -38.100 20  TM1595 TM1595 283452 Purified-2001-12-11
15 gi|15923005|ref|NP_370539.1| 50S ribosomal protein L9 (SAV0015) [Staphylococcus aureus subsp. aureus Mu50] 148 JCSG0516 1-148 -84.200 35  TM0863 TM0863 282733 Purified-2001-04-19
16 gi|15923006|ref|NP_370540.1| replicative DNA helicase (SAV0016) [Staphylococcus aureus subsp. aureus Mu50] 466 JCSG0516 8-462 -140.000 45  TM1736 TM1736 283591 Purified-2001-11-28
17 gi|15923007|ref|NP_370541.1| adenylosuccinate synthetase (SAV0017) [Staphylococcus aureus subsp. aureus Mu50] 427 JCSG0516 3-423 -128.000 39  TM1096 TM1096 282962 Purified-2001-10-30
18 gi|15923008|ref|NP_370542.1| response regulator (SAV0018) [Staphylococcus aureus subsp. aureus Mu50] 235 JCSG0516 3-235 -116.000 50  TM1655 TM1655 283512 Selected-2001-10-12
19 gi|15923009|ref|NP_370543.1| two-component sensor histidine kinase (SAV0019) [Staphylococcus aureus subsp. aureus Mu50] 608 JCSG0516 2-605 -62.600 14  TT16453A SBAL_17SEP04_CONTIG201_REVISED_GENE1177 404250 Selected-2009-08-14
116-608 -101.000 22  TM0853 TM0853 282723 Purified-2001-07-16
20 gi|15923010|ref|NP_370544.1| hypothetical protein (SAV0020) [Staphylococcus aureus subsp. aureus Mu50] 453 JCSG0516 11-448 -32.100 14  SP16933A ZP_02036918.1 407246 Purified-2010-09-29


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Ye Y, Godzik A. FATCAT: a web server for flexible structure comparison and structure similarity searching. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W582-5.