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# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15607143|ref|NP_214515.1| chromosomal replication initiation protein (Rv0001) [Mycobacterium tuberculosis H37Rv] 507 COG0516 8-503 -114.000 34  [L] COG0593 ATPase involved in DNA replication initiation
H.sapiens 178-505 -11.300 12  sp|Q99741|CDC6_HUMAN Cell division control protein 6 homolog OS=Homo sapiens GN=CDC6 PE=1 SV=1
HGM_OVER 237-390 -3.740 14  HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304;
JCSG0516 7-502 -112.000 28  C.LS21333A NP_418828.1 430427 Purified-2014-07-08
NEW_HUMAN_DOMAINS 183-320 -5.140 14  sp|Q8IVG5|SAM9L_HUMAN Sterile alpha motif domain-containing protein 9-like OS=Homo sapiens GN=SAMD9L PE=1 SV=2 (Range: 687-863)
PDB0516 12-507 -118.000 31  2z4r_A mol:protein length:440 Chromosomal replication initiator protein dna
PfamA30U 168-386 -103.000 79  PF00308.16; DNAA_STRCO/317-535; Bacterial dnaA protein
413-480 -29.900 51  PF08299.9; D9QS97_ACEAZ/358-426; Bacterial dnaA protein helix-turn-helix
SCOP206 166-381 -92.100 39  d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
398-504 -38.100 28  d1l8qa1 a.4.12.2 (A:290-399) Chromosomal replication initiation factor DnaA C-terminal domain IV {Aquifex aeolicus [TaxId: 63363]}
VFDB 204-422 -8.220 16  VFG002380(gi:15611004) (eccA1) ESX-1 type VII secretion system AAA+ ATPase EccA1 [ESX-1 (VF0315)] [Mycobacterium tuberculosis H37Rv]
2 gi|15607144|ref|NP_214516.1| DNA polymerase III subunit beta (Rv0002) [Mycobacterium tuberculosis H37Rv] 402 COG0516 13-402 -89.200 24  [L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog)
H.sapiens 140-397 -10.600 14  sp|P12004|PCNA_HUMAN Proliferating cell nuclear antigen OS=Homo sapiens GN=PCNA PE=1 SV=1
HGM_OVER 13-321 -3.440 12  PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361;
JCSG0516 9-402 -107.000 48  MH15440E NP_599254.1 394276 Crystal|NMR-2009-04-01
NEW_HUMAN_DOMAINS 102-166 -4.790 21  sp|Q96PP4|TSG13_HUMAN Testis-specific gene 13 protein OS=Homo sapiens GN=TSGA13 PE=1 SV=1 (Range: 30-120)
PDB0516 1-402 -116.000 100  3p16_A mol:protein length:408 DNA polymerase III subunit beta
PfamA30U 13-129 -46.200 25  PF00712.17; DPO3B_CAUCR/1-121; DNA polymerase III beta subunit, N-terminal domain
138-260 -41.400 22  PF02767.14; DPO3B_PSEPK/129-244; DNA polymerase III beta subunit, central domain
262-399 -40.300 27  PF02768.13; DPO3B_BACSU/253-376; DNA polymerase III beta subunit, C-terminal domain
SCOP206 13-130 -51.100 23  d1vpka1 d.131.1.1 (A:1-120) DNA polymerase III, beta subunit {Thermotoga maritima [TaxId: 2336]}
133-261 -43.100 25  d1vpka2 d.131.1.1 (A:121-243) DNA polymerase III, beta subunit {Thermotoga maritima [TaxId: 2336]}
262-401 -46.100 27  d1vpka3 d.131.1.1 (A:244-366) DNA polymerase III, beta subunit {Thermotoga maritima [TaxId: 2336]}
VFDB 177-357 -4.700 10  VFG000005(gi:33593643) (fimX) fimbrial protein [Fimbriae (VF0031)] [Bordetella pertussis Tohama I]
3 gi|15607145|ref|NP_214517.1| recombination protein F (Rv0003) [Mycobacterium tuberculosis H37Rv] 385 COG0516 1-379 -99.800 24  [L] COG1195 Recombinational DNA repair ATPase (RecF pathway)
H.sapiens 2-265 -18.800 13  sp|Q92878|RAD50_HUMAN DNA repair protein RAD50 OS=Homo sapiens GN=RAD50 PE=1 SV=1 (Range: 1-300)
136-353 -10.600 14  sp|Q9UQE7|SMC3_HUMAN Structural maintenance of chromosomes protein 3 OS=Homo sapiens GN=SMC3 PE=1 SV=2 (Range: 901-1200)
HGM_OVER 246-338 -2.290 12  PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;
JCSG0516 1-353 -21.600 12  NT12358C DHAF_12NOV03_CONTIG1086_REVISED_GENE3509 378730 Purified-2008-01-24
1-383 -14.200 13  NT10183B NP_661802.1 378684 Purified-2007-09-04
NEW_HUMAN_DOMAINS 266-333 -4.530 16  sp|Q2KJY2|KI26B_HUMAN Kinesin-like protein KIF26B OS=Homo sapiens GN=KIF26B PE=1 SV=1 (Range: 1171-1259)
PDB0516 1-383 -112.000 32  2o5v_A mol:protein length:359 DNA replication and repair protein recF
PfamA30U 1-353 -21.500 PF13175.4; I1YS32_PREI7/1-378; AAA ATPase domain
SCOP206 1-384 -28.800 19  g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Pyrococcus furiosus [TaxId: 2261]}
VFDB 3-353 -12.700 16  VFG037118(gi:15676638) (recN) DNA repair protein RecN [RecN (VF0457)] [Neisseria meningitidis MC58]
4 gi|15607146|ref|NP_214518.1| hypothetical protein (Rv0004) [Mycobacterium tuberculosis H37Rv] 187 COG0516 1-187 -92.000 70  [R] COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives
H.sapiens 105-186 -8.170 26  sp|P25092|GUC2C_HUMAN(removed signalp:1-20) Heat-stable enterotoxin receptor OS=Homo sapiens GN=GUCY2C PE=1 SV=2 (Range: 901-1053)
HGM_OVER 77-186 -4.930 14  PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]
JCSG0516 12-180 -72.700 24  NN16164A YP_908867.1 400955 Cloned-2009-07-10
NEW_HUMAN_DOMAINS 80-187 -5.850 12  sp|Q8NCR3|CK065_HUMAN Uncharacterized protein C11orf65 OS=Homo sapiens GN=C11orf65 PE=2 SV=1 (Range: 211-313)
PDB0516 71-180 -8.100 13  2ig3_A mol:protein length:127 Group III truncated haemoglobin
PfamA30U 76-162 -38.600 25  PF05258.10; Q02A53_SOLUE/3-88; Protein of unknown function (DUF721 topsan)
SCOP206 71-180 -8.100 13  d2ig3a_ a.1.1.0 (A:) automated matches {Campylobacter jejuni [TaxId: 197]}
VFDB 1-180 -6.770 12  VFG000046(gi:33593242) (bscP) Bordetella Bsc type III secretion system protein BscP [TTSS (VF0035)] [Bordetella pertussis Tohama I]
5 gi|15607147|ref|NP_214519.1| DNA gyrase subunit B (Rv0005) [Mycobacterium tuberculosis H37Rv] 714 COG0516 44-714 -160.000 49  [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
H.sapiens 24-329 -49.000 18  sp|P11388|TOP2A_HUMAN DNA topoisomerase 2-alpha OS=Homo sapiens GN=TOP2A PE=1 SV=3 (Range: 1-300)
129-465 -63.400 14  sp|Q02880|TOP2B_HUMAN DNA topoisomerase 2-beta OS=Homo sapiens GN=TOP2B PE=1 SV=3 (Range: 151-450)
312-609 -76.700 21  sp|Q02880|TOP2B_HUMAN DNA topoisomerase 2-beta OS=Homo sapiens GN=TOP2B PE=1 SV=3 (Range: 301-600)
468-714 -50.500 27  sp|Q02880|TOP2B_HUMAN DNA topoisomerase 2-beta OS=Homo sapiens GN=TOP2B PE=1 SV=3 (Range: 451-750)
HGM_OVER 529-703 -2.830 19  HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;
JCSG0516 49-714 -196.000 53  TM0833 TM0833 282703 Purified-2005-04-05
NEW_HUMAN_DOMAINS 320-461 -6.260 sp|Q8N6G2|CM026_HUMAN Uncharacterized protein C13orf26 OS=Homo sapiens GN=C13orf26 PE=2 SV=1 (Range: 105-289)
PDB0516 29-713 -191.000 47  4juo_C mol:protein length:670 DNA topoisomerase 4 subunit B
PfamA30U 295-464 -82.400 44  PF00204.23; A9KS52_CLOPH/226-396; DNA gyrase B
605-709 -16.400 16  PF16898.3; K5XBZ3_PHACS/641-767; C-terminal associated domain of TOPRIM
642-703 -42.800 61  PF00986.19; M9X0E0_MANHA/738-800; DNA gyrase B subunit, carboxyl terminus
SCOP206 61-259 -87.400 54  d4k4oa1 d.122.1.0 (A:18-224) automated matches {Enterococcus faecalis [TaxId: 226185]}
295-466 -83.400 45  d1kija1 d.14.1.3 (A:221-392) DNA gyrase B {Thermus thermophilus [TaxId: 274]}
487-693 -102.000 100  d3m4ia_ e.78.1.1 (A:) DNA gyrase beta-prime domain {Mycobacterium tuberculosis [TaxId: 1773]}
VFDB 42-616 -6.860 13  VFG000434(gi:17233482) (pefC) plasmid-encoded fimbriae usher protein PefC [Pef (VF0104)] [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
6 gi|15607148|ref|NP_214520.1| DNA gyrase subunit A (Rv0006) [Mycobacterium tuberculosis H37Rv] 838 COG0516 10-826 -207.000 42  [L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
H.sapiens 14-212 -25.100 28  sp|P11388|TOP2A_HUMAN DNA topoisomerase 2-alpha OS=Homo sapiens GN=TOP2A PE=1 SV=3 (Range: 601-900)
77-393 -56.700 21  sp|P11388|TOP2A_HUMAN DNA topoisomerase 2-alpha OS=Homo sapiens GN=TOP2A PE=1 SV=3 (Range: 751-1050)
245-498 -29.700 15  sp|P11388|TOP2A_HUMAN DNA topoisomerase 2-alpha OS=Homo sapiens GN=TOP2A PE=1 SV=3 (Range: 901-1200)
HGM_OVER 411-497 -3.200 PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete)
JCSG0516 13-820 -201.000 42  TM1084 TM1084 282951 Purified-2001-04-24
NEW_HUMAN_DOMAINS 44-172 -4.810 18  sp|Q9H1B7|I2BPL_HUMAN Interferon regulatory factor 2-binding protein-like OS=Homo sapiens GN=IRF2BPL PE=1 SV=1 (Range: 373-516)
PDB0516 1-502 -154.000 99  3ifz_A mol:protein length:508 DNA gyrase subunit A
37-820 -130.000 34  1zvu_A mol:protein length:716 Topoisomerase IV subunit A
PfamA30U 39-484 -63.300 19  PF00521.18; A0A0D1DXS4_USTMA/785-1232; DNA gyrase/topoisomerase IV, subunit A
621-666 -17.100 50  PF03989.11; GYRA_HAEIN/641-686; DNA gyrase C-terminal domain, beta-propeller
SCOP206 37-500 -143.000 100  d3ilwa_ e.11.1.0 (A:) automated matches {Mycobacterium tuberculosis [TaxId: 1773]}
512-820 -75.800 100  d4g3na_ b.68.10.0 (A:) automated matches {Mycobacterium tuberculosis [TaxId: 83332]}
VFDB 51-775 -7.400 VFG001960(gi:15792750) (Cj1432c) sugar transferase [Capsule (VF0323)] [Campylobacter jejuni subsp. jejuni NCTC 11168]
7 gi|15607149|ref|NP_214521.1| hypothetical protein (Rv0007) [Mycobacterium tuberculosis H37Rv] 304 COG0516 1-304 -14.100 11  [K] KOG3915 Transcription regulator dachshund, contains SKI/SNO domain
H.sapiens 1-302 -12.000 13  sp|O95873|CF047_HUMAN Uncharacterized protein C6orf47 OS=Homo sapiens GN=C6orf47 PE=1 SV=2
HGM_OVER 200-301 -6.130 14  PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;
JCSG0516 2-188 -9.830 SP2363E ZP_02069969.1 409482 Purified-2010-09-29
2-243 -9.610 RF20622A.ZCCHC8 BC065918 421231 Purified-2010-12-01
NEW_HUMAN_DOMAINS 192-287 -6.890 10  sp|Q96AG3|S2546_HUMAN Solute carrier family 25 member 46 OS=Homo sapiens GN=SLC25A46 PE=1 SV=1 (Range: 171-293)
PDB0516 205-293 -9.750 16  2q67_A mol:protein length:114 Potassium channel protein
PfamA30U 2-287 -9.510 10  PF07267.9; Q2NNY4_NPVHC/1-628; Nucleopolyhedrovirus capsid protein P87
32-302 -12.600 13  PF15576.4; L9KL33_TUPCH/16-260; Domain of unknown function (DUF4661 topsan)
186-302 -51.500 60  PF12089.6; Q0SAF2_RHOJR/351-465; Transmembrane domain of unknown function (DUF3566 topsan)
SCOP206 205-285 -7.950 11  d1lnqa2 f.14.1.1 (A:19-98) Potassium channel-related protein MthK {Methanothermobacter thermautotrophicus [TaxId: 145262]}
VFDB 200-303 -8.610 10  VFG045338(gi:588561371) (llsP) CAAX amino terminal protease LlsP [LLS (VF0410)] [Listeria innocua SLCC6294]
8 gi|15607150|ref|NP_214522.1| hypothetical protein (Rv0008c) [Mycobacterium tuberculosis H37Rv] 145 COG0516 7-129 -5.970 22  [S] COG4732 Predicted membrane protein
H.sapiens 54-145 -7.070 sp|Q9UM47|NOTC3_HUMAN(removed signalp:1-39) Neurogenic locus notch homolog protein 3 OS=Homo sapiens GN=NOTCH3 PE=1 SV=1 (Range: 1351-1650)
HGM_OVER 9-145 -4.300 13  PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;
JCSG0516 1-81 -8.710 11  GS13671A YP_193568.1 384390 Selected-2007-09-11
NEW_HUMAN_DOMAINS 21-81 -6.460 19  sp|P78527|PRKDC_HUMAN DNA-dependent protein kinase catalytic subunit OS=Homo sapiens GN=PRKDC PE=1 SV=3 (Range: 2923-3023)
PDB0516 1-86 -8.270 18  3d3y_A mol:protein length:425 Uncharacterized protein
PfamA30U 9-145 -89.300 100  PF10814.6; CWSA_MYCTU/9-145; Cell wall synthesis protein CwsA
SCOP206 1-93 -6.580 12  d2jdia1 a.69.1.1 (A:380-510) F1 ATP synthase alpha subunit, domain 3 {Cow (Bos taurus) [TaxId: 9913]}
VFDB 1-102 -6.170 10  VFG001290(gi:21284280) (clfB) Clumping factor B, adhesin [Clumping factor (VF0004)] [Staphylococcus aureus subsp. aureus MW2]
9 gi|15607151|ref|NP_214523.1| iron-regulated peptidyl-prolyl cis-trans isomerase A (Rv0009) [Mycobacterium tuberculosis H37Rv] 182 COG0516 1-182 -85.300 45  [O] KOG0881 Cyclophilin type peptidyl-prolyl cis-trans isomerase
H.sapiens 5-182 -87.200 46  sp|Q9Y3C6|PPIL1_HUMAN Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo sapiens GN=PPIL1 PE=1 SV=1
HGM_OVER 90-180 -3.980 20  PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]
JCSG0516 1-181 -69.000 40  C.MS20674A PPIL2-2-K006 423704 Purified-2011-07-06
NEW_HUMAN_DOMAINS 44-118 -6.750 12  sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens GN=BAZ1A PE=1 SV=2 (Range: 522-611)
PDB0516 1-182 -118.000 99  1w74_A mol:protein length:191 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A
PfamA30U 16-169 -60.000 24  PF00160.19; Q7NG65_GLOVI/261-474; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
SCOP206 13-182 -117.000 100  d1w74a_ b.62.1.1 (A:) Peptidyl-prolyl cis-trans isomerase A, PpiA {Mycobacterium tuberculosis [TaxId: 1773]}
VFDB 1-182 -105.000 53  VFG041304(gi:52842179) (lirB) Dot/Icm type IV secretion system effector LirB [Dot/Icm (SS047)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
10 gi|15607152|ref|NP_214524.1| hypothetical protein (Rv0010c) [Mycobacterium tuberculosis H37Rv] 141 COG0516 17-113 -7.540 17  [S] COG4811 Predicted membrane protein
H.sapiens 47-141 -9.960 sp|Q6KC79|NIPBL_HUMAN Nipped-B-like protein OS=Homo sapiens GN=NIPBL PE=1 SV=2 (Range: 2551-2804)
HGM_OVER 14-80 -4.730 23  PB053244 _HOMD.0087087_ pint_c_2_2642 Prevotella intermedia 17 [158005 - 157583] (REVERSE SENSE) ORF
JCSG0516 1-132 -11.500 10  SP18685A YP_001298424.1 409622 Purified-2010-09-29
NEW_HUMAN_DOMAINS 32-141 -9.220 10  sp|Q6KC79|NIPBL_HUMAN Nipped-B-like protein OS=Homo sapiens GN=NIPBL PE=1 SV=2 (Range: 2691-2804)
PDB0516 43-141 -8.190 4chj_A mol:protein length:164 IMC SUB-COMPARTMENT PROTEIN ISP3
PfamA30U 13-141 -10.400 10  PF15169.4; CQ062_XENTR/2-187; Domain of unknown function (DUF4564 topsan)
58-136 -24.200 18  PF10756.7; Q5YRV9_NOCFA/80-151; Bacterial PH domain
SCOP206 45-132 -6.820 d4ekfa_ d.3.1.7 (A:) Human adenovirus 2 proteinase, adenain {Mastadenovirus H2 [TaxId: 10515]}
VFDB 37-133 -6.780 23  VFG002493(gi:53717668) (fliO) flagellar protein FliO [Flagella (VF0430)] [Burkholderia pseudomallei K96243]
11 gi|15607153|ref|NP_214525.1| putative septation inhibitor protein (Rv0011c) [Mycobacterium tuberculosis H37Rv] 93 COG0516 1-54 -9.460 14  [R] KOG0231 Junctional membrane complex protein Junctophilin and related MORN repeat proteins
H.sapiens 16-93 -11.300 13  sp|Q96K78|GP128_HUMAN(removed signalp:1-26) Probable G-protein coupled receptor 128 OS=Homo sapiens GN=GPR128 PE=1 SV=2 (Range: 601-771)
HGM_OVER 1-91 -7.180 PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205;
JCSG0516 1-55 -9.680 16  TM0241 TM0241 282120 Purified-2004-10-27
NEW_HUMAN_DOMAINS 30-52 -5.890 17  tr|B5MCI2|B5MCI2_HUMAN Uncharacterized protein OS=Homo sapiens PE=4 SV=1 (Range: 1-116)
PDB0516 1-93 -70.900 100  2mmu_A mol:protein length:101 Cell division protein CrgA
PfamA30U 1-93 -60.900 32  PF06781.10; D1BI18_SANKS/1-89; Uncharacterised protein family (UPF0233 topsan)
SCOP206 1-93 -6.130 d1jatb_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Baker`s yeast (Saccharomyces cerevisiae), mms2 [TaxId: 4932]}
VFDB 9-91 -8.600 17  VFG045345(gi:28898385) (VP1611) multivalent adhesion molecule MAM7 [MAM7 (VF0512)] [Vibrio parahaemolyticus RIMD 2210633]
12 gi|15607154|ref|NP_214526.1| hypothetical protein (Rv0012) [Mycobacterium tuberculosis H37Rv] 262 COG0516 18-250 -74.700 20  [S] COG3879 Uncharacterized protein conserved in bacteria
H.sapiens 26-210 -7.800 11  sp|P07306|ASGR1_HUMAN Asialoglycoprotein receptor 1 OS=Homo sapiens GN=ASGR1 PE=1 SV=2
HGM_OVER 21-193 -6.810 PB015266 gi|154494998|ref|ZP_02034003.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]gi|154085548|gb|EDN84593.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]
JCSG0516 17-261 -83.400 32  SP17421A ZP_02043984.1 406518 Purified-2010-01-22
NEW_HUMAN_DOMAINS 26-105 -6.390 sp|Q9BXG8|SPZ1_HUMAN Spermatogenic leucine zipper protein 1 OS=Homo sapiens GN=SPZ1 PE=2 SV=2 (Range: 30-129)
PDB0516 86-260 -56.900 28  3gmg_A mol:protein length:170 Uncharacterized protein Rv1825/MT1873
PfamA30U 102-255 -65.000 26  PF05949.10; F6B3E0_DESCC/87-231; Bacterial protein of unknown function (DUF881 topsan)
SCOP206 49-212 -7.160 11  d1gtea5 d.58.1.5 (A:845-1017) Dihydropyrimidine dehydrogenase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
VFDB 26-240 -8.000 10  VFG002192(gi:29376363) (fsrC) histidine kinase, putative [Fsr (VF0360)] [Enterococcus faecalis V583]
13 gi|57116682|ref|YP_177615.1| para-aminobenzoate synthase component II (Rv0013) [Mycobacterium tuberculosis H37Rv] 232 COG0516 1-232 -59.100 33  [J] KOG1224 Para-aminobenzoate (PABA) synthase ABZ1
2-191 -106.000 50  [EH] COG0512 Anthranilate/para-aminobenzoate synthases component II
H.sapiens 2-211 -30.100 21  sp|P49915|GUAA_HUMAN GMP synthase [glutamine-hydrolyzing] OS=Homo sapiens GN=GMPS PE=1 SV=1 (Range: 1-300)
HGM_OVER 68-187 -3.300 14  PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]
JCSG0516 2-190 -75.700 50  TM0141 TM0141 282021 Purified-2004-02-02
2-232 -26.500 21  MA1820A NP_003866.1 400420 Selected-2008-12-22
NEW_HUMAN_DOMAINS 4-85 -5.240 18  sp|Q5U5Z8|CBPC2_HUMAN Cytosolic carboxypeptidase 2 OS=Homo sapiens GN=AGBL2 PE=2 SV=2 (Range: 1-102)
PDB0516 2-192 -96.400 42  1qdl_B mol:protein length:195 PROTEIN (ANTHRANILATE SYNTHASE (TRPG-SUBUNIT)
2-232 -26.500 21  2vxo_A mol:protein length:697 GMP SYNTHASE [GLUTAMINE-HYDROLYZING]
PfamA30U 4-189 -37.700 22  PF00117.26; GUAA_BACSU/10-192; Glutamine amidotransferase class-I
SCOP206 2-192 -96.400 42  d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Sulfolobus solfataricus [TaxId: 2287]}
VFDB 1-192 -46.400 25  VFG015515(gi:15599409) (phzE1) phenazine biosynthesis protein PhzE [Phenazines biosynthesis (CVF536)] [Pseudomonas aeruginosa PAO1]
14 gi|15607156|ref|NP_214528.1| transmembrane serine/threonine-protein kinase B PKNB (protein kinase B) (STPK B) (Rv0014c) [Mycobacterium tuberculosis H37Rv] 626 COG0516 1-328 -84.500 35  [RTKL] COG0515 Serine/threonine protein kinase
429-626 -49.100 84  [S] COG2815 Uncharacterized protein conserved in bacteria
H.sapiens 1-231 -49.900 28  sp|Q9NYY3|PLK2_HUMAN Serine/threonine-protein kinase PLK2 OS=Homo sapiens GN=PLK2 PE=1 SV=3 (Range: 1-300)
34-296 -66.000 15  sp|Q9BXU1|STK31_HUMAN Serine/threonine-protein kinase 31 OS=Homo sapiens GN=STK31 PE=2 SV=2 (Range: 751-1019)
HGM_OVER 136-280 -3.500 10  HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508;
JCSG0516 1-626 -162.000 39  SF20747A NP_628036.1 423200 Purified-2011-09-23
NEW_HUMAN_DOMAINS 123-231 -5.150 tr|F8WDW8|F8WDW8_HUMAN Uncharacterized protein OS=Homo sapiens GN=CASD1 PE=4 SV=1 (Range: 1-103)
PDB0516 1-308 -118.000 100  1mru_A mol:protein length:311 Probable serine/threonine-protein kinase pknB
1-415 -65.500 15  5ckw_B mol:protein length:451 LegK4
355-626 -61.500 100  2kui_A mol:protein length:275 Serine/threonine-protein kinase pknB
PfamA30U 11-270 -43.400 22  PF00069.23; KS6A1_MOUSE/407-664; Protein kinase domain
495-557 -13.900 23  PF03793.17; A0A098MZT7_LEPIR/112-183; PASTA domain
SCOP206 1-290 -118.000 99  d3orka1 d.144.1.7 (A:1-290) automated matches {Mycobacterium tuberculosis [TaxId: 419947]}
VFDB 5-626 -122.000 20  VFG002060(gi:15595272) (ppkA) serine/threonine protein kinase PpkA [HSI-I (VF0334)] [Pseudomonas aeruginosa PAO1]
15 gi|15607157|ref|NP_214529.1| transmembrane serine/threonine-protein kinase A PKNA (protein kinase A) (STPK A) (Rv0015c) [Mycobacterium tuberculosis H37Rv] 431 COG0516 4-338 -99.100 29  [RTKL] COG0515 Serine/threonine protein kinase
9-417 -38.000 17  [T] KOG0607 MAP kinase-interacting kinase and related serine/threonine protein kinases
H.sapiens 5-258 -57.500 29  sp|Q9H4B4|PLK3_HUMAN Serine/threonine-protein kinase PLK3 OS=Homo sapiens GN=PLK3 PE=1 SV=2 (Range: 1-300)
36-310 -72.600 15  sp|Q9BXU1|STK31_HUMAN Serine/threonine-protein kinase 31 OS=Homo sapiens GN=STK31 PE=2 SV=2 (Range: 751-1019)
HGM_OVER 52-255 -4.320 14  HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304;
JCSG0516 4-431 -110.000 30  SF20747A NP_628036.1 423200 Purified-2011-09-23
NEW_HUMAN_DOMAINS 137-231 -4.670 14  sp|Q9BQC6|RT63_HUMAN Ribosomal protein 63, mitochondrial OS=Homo sapiens GN=MRP63 PE=2 SV=1 (Range: 1-102)
PDB0516 1-336 -122.000 100  4x3f_B mol:protein length:337 Serine/threonine-protein kinase PknA
1-429 -76.200 16  5ckw_B mol:protein length:451 LegK4
PfamA30U 13-269 -47.800 23  PF00069.23; KS6A1_MOUSE/407-664; Protein kinase domain
SCOP206 4-288 -104.000 40  d3orka1 d.144.1.7 (A:1-290) automated matches {Mycobacterium tuberculosis [TaxId: 419947]}
VFDB 8-431 -97.900 25  VFG002060(gi:15595272) (ppkA) serine/threonine protein kinase PpkA [HSI-I (VF0334)] [Pseudomonas aeruginosa PAO1]
16 gi|15607158|ref|NP_214530.1|(removed signalp:1-30) penicillin-binding protein PbpA (Rv0016c) [Mycobacterium tuberculosis H37Rv] 461 COG0516 41-460 -60.000 25  [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2
H.sapiens 52-160 -5.890 10  sp|Q9Y2A0|T53G1_HUMAN TP53-target gene 1 protein OS=Homo sapiens GN=TP53TG1 PE=2 SV=1
HGM_OVER 314-409 -3.970 13  PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205;
JCSG0516 2-461 -61.600 26  TM0590 TM0590 282463 Purified-2004-02-02
46-458 -69.200 24  SP17557B ZP_02041760.1 413493 Selected-2009-11-12
NEW_HUMAN_DOMAINS 141-228 -4.870 11  sp|Q9BXF9|TEKT3_HUMAN Tektin-3 OS=Homo sapiens GN=TEKT3 PE=1 SV=1 (Range: 1-98)
PDB0516 1-461 -155.000 99  3lo7_A mol:protein length:483 Penicillin-binding protein A
PfamA30U 132-454 -45.000 21  PF00905.20; YQGFA_BACSU/352-682; Penicillin binding protein transpeptidase domain
SCOP206 75-461 -39.800 20  d2v2ff_ e.3.1.1 (F:) automated matches {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
108-460 -80.300 19  d1vqqa3 e.3.1.1 (A:328-668) Penicillin binding protein 2a (PBP2A), C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
VFDB 111-186 -4.650 19  VFG000206(gi:15596908) (exsE) type III secretion system regulatory protein ExsE [TTSS (VF0083)] [Pseudomonas aeruginosa PAO1]
17 gi|15607159|ref|NP_214531.1|(removed signalp:1-35) cell division protein RodA (Rv0017c) [Mycobacterium tuberculosis H37Rv] 434 COG0516 41-410 -49.200 26  [D] COG0772 Bacterial cell division membrane protein
H.sapiens 207-396 -6.330 12  sp|Q3KNS1|PTHD3_HUMAN Patched domain-containing protein 3 OS=Homo sapiens GN=PTCHD3 PE=1 SV=2 (Range: 1-300)
HGM_OVER 356-406 -4.790 15  PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;
JCSG0516 43-412 -59.600 22  TM0233 TM0233 282112 Purified-2001-02-27
NEW_HUMAN_DOMAINS 367-408 -5.420 21  sp|P0C7V7|SC11B_HUMAN Putative signal peptidase complex catalytic subunit SEC11B OS=Homo sapiens GN=SEC11B PE=5 SV=1 (Range: 91-166)
PDB0516 327-406 -7.990 14  2maw_A mol:protein length:137 Neuronal acetylcholine receptor subunit alpha
PfamA30U 45-410 -63.900 31  PF01098.17; SP5E_BACSU/10-366; Cell cycle protein
SCOP206 327-406 -6.780 18  d1oeda_ f.36.1.1 (A:) Acetylcholine receptor protein, alpha chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}
VFDB 49-390 -7.260 10  VFG011505(gi:17987609) (lpsA) glycosyltransferase [LPS (CVF383)] [Brucella melitensis bv. 1 str. 16M]
18 gi|15607160|ref|NP_214532.1| serine/threonine phosphatase (Rv0018c) [Mycobacterium tuberculosis H37Rv] 514 COG0516 1-247 -53.400 29  [T] COG0631 Serine/threonine protein phosphatase
H.sapiens 8-238 -30.400 25  sp|Q8N3J5|PPM1K_HUMAN Protein phosphatase 1K, mitochondrial OS=Homo sapiens GN=PPM1K PE=1 SV=1
33-273 -22.400 14  sp|O60346|PHLP1_HUMAN PH domain leucine-rich repeat-containing protein phosphatase 1 OS=Homo sapiens GN=PHLPP1 PE=1 SV=3 (Range: 1201-1500)
HGM_OVER 54-224 -3.570 PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;
JCSG0516 7-242 -68.400 34  C.KS20801A NP_371743.1 423893 Crystal|NMR-2012-06-09
294-417 -10.600 12  SP17951A ZP_02041108.1 413555 Crystal|NMR-2011-11-06
NEW_HUMAN_DOMAINS 421-506 -4.990 17  sp|Q9HAP2|MLXIP_HUMAN MLX-interacting protein OS=Homo sapiens GN=MLXIP PE=1 SV=2 (Range: 414-523)
PDB0516 1-240 -98.200 100  2cm1_A mol:protein length:260 SERINE THREONINE PROTEIN PHOSPHATASE PSTP
PfamA30U 33-231 -22.300 14  PF00481.19; B2AA70_PODAN/1451-1701; Protein phosphatase 2C
SCOP206 6-240 -96.700 98  d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]}
VFDB 1-239 -81.900 31  VFG002061(gi:15595273) (pppA) Pseudomonas protein phosphatase PppA [HSI-I (VF0334)] [Pseudomonas aeruginosa PAO1]
1-423 -35.800 10  VFG041258(gi:52840933) (lem3) Dot/Icm type IV secretion system effector Lem3, Dephosphoryl-cholinase relieving the AnkX-mediated modification on Rab1 [Dot/Icm (SS047)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
19 gi|15607161|ref|NP_214533.1| hypothetical protein (Rv0019c) [Mycobacterium tuberculosis H37Rv] 155 COG0516 41-155 -34.600 24  [T] COG1716 FOG: FHA domain
H.sapiens 16-129 -17.000 16  sp|Q96QT6|PHF12_HUMAN PHD finger protein 12 OS=Homo sapiens GN=PHF12 PE=1 SV=2 (Range: 601-900)
57-154 -40.200 18  sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 (Range: 1-300)
HGM_OVER 10-143 -6.100 10  HGC01213 gi|163579070|dbj|BABE01006032.1|2.0 TMP01709;
JCSG0516 1-154 -78.300 35  SP1588A ZP_02043995.1 406531 Purified-2010-09-29
NEW_HUMAN_DOMAINS 82-153 -5.150 tr|E5RHQ3|E5RHQ3_HUMAN Uncharacterized protein OS=Homo sapiens GN=NUDCD1 PE=4 SV=1 (Range: 1-79)
PDB0516 51-153 -51.800 36  2xt9_B mol:protein length:115 PUTATIVE SIGNAL TRANSDUCTION PROTEIN GARA
PfamA30U 65-155 -49.200 26  PF16697.3; E3FMY4_STIAD/31-122; Inner membrane component of T3SS, cytoplasmic domain
SCOP206 59-154 -53.100 22  d2ff4a3 b.26.1.2 (A:284-382) Probable regulatory protein EmbR, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
VFDB 30-153 -16.900 23  VFG002139(gi:15605397) (cdsD) Type III secretion system inner membrane ring complex protein CdsD [TTSS (VF0344)] [Chlamydia trachomatis D/UW-3/CX]
64-155 -24.700 15  VFG000403(gi:16082741) (yscD) type III secretion system outer MS ring protein YscD [TTSS (VF0140)] [Yersinia pestis CO92]
20 gi|15607162|ref|NP_214534.1| hypothetical protein (Rv0020c) [Mycobacterium tuberculosis H37Rv] 527 COG0516 23-434 -19.100 [R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)
181-527 -20.600 13  [T] KOG1882 Transcriptional regulator SNIP1, contains FHA domain
281-518 -26.700 12  [T] KOG3872 FOG: FHA domain
413-524 -30.800 20  [T] COG1716 FOG: FHA domain
H.sapiens 7-521 -10.400 11  sp|Q5SZQ8|CELF3_HUMAN CUGBP Elav-like family member 3 OS=Homo sapiens GN=CELF3 PE=1 SV=1
149-521 -12.400 15  sp|P35637|FUS_HUMAN RNA-binding protein FUS OS=Homo sapiens GN=FUS PE=1 SV=1
181-527 -21.500 13  sp|Q8TAD8|SNIP1_HUMAN Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1 SV=1
380-527 -36.100 21  sp|Q8N302|AGGF1_HUMAN Angiogenic factor with G patch and FHA domains 1 OS=Homo sapiens GN=AGGF1 PE=1 SV=2 (Range: 301-600)
430-525 -43.600 28  sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2 (Range: 1-300)
HGM_OVER 2-126 -5.390 15  PB021133 Q64YN4_BACFR/1-310 PB021133; Pfam-B_21133;
JCSG0516 66-521 -13.800 11  RG2003A.EWS BC004817 421797 Purified-2011-07-14
395-525 -33.700 20  SP1588A ZP_02043995.1 406531 Purified-2010-09-29
NEW_HUMAN_DOMAINS 1-111 -5.280 13  sp|Q5JWR5|DOP1_HUMAN Protein dopey-1 OS=Homo sapiens GN=DOPEY1 PE=1 SV=1 (Range: 2035-2253)
PDB0516 1-132 -48.400 100  2lc0_A mol:protein length:132 Putative uncharacterized protein TB39.8
375-525 -49.800 90  3oun_A mol:protein length:157 Putative uncharacterized protein TB39.8
PfamA30U 1-525 -9.940 PF04388.10; F7E2N6_XENTR/7-705; Hamartin protein
8-122 -41.800 28  PF12401.6; F8JSD1_STREN/4-118; Protein of unknown function (DUF2662 topsan)
12-303 -10.300 PF05934.9; CLCC1_RAT/3-541; Mid-1-related chloride channel (MCLC)
437-525 -31.300 23  PF16697.3; E3FMY4_STIAD/31-122; Inner membrane component of T3SS, cytoplasmic domain
SCOP206 433-527 -40.100 100  d3po8a1 b.26.1.0 (A:3-97) automated matches {Mycobacterium tuberculosis [TaxId: 1773]}
VFDB 1-524 -18.400 12  VFG002139(gi:15605397) (cdsD) Type III secretion system inner membrane ring complex protein CdsD [TTSS (VF0344)] [Chlamydia trachomatis D/UW-3/CX]
439-527 -21.300 27  VFG002080(gi:15600883) (vasC) type VI secretion system protein VasC [T6SS (VF0335)] [Vibrio cholerae O1 biovar El Tor str. N16961]


FFAS is supported by the NIH grant R01-GM087218-01
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Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Ye Y, Godzik A. FATCAT: a web server for flexible structure comparison and structure similarity searching. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W582-5.