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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 19629next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 CE21227 CE21227 1315 PDB-2004-06-11 525 NEW_HUMAN_DOMAINS 27-71 -6.390 26  sp|Q15155|NOMO1_HUMAN Nodal modulator 1 OS=Homo sapiens GN=NOMO1 PE=1 SV=5 (Range: 745-810)
2 TM0001 TM0001 281882 Purified-2001-08-24 41 NEW_HUMAN_DOMAINS 8-34 -4.420 25  sp|Q96M20|CT152_HUMAN Uncharacterized protein C20orf152 OS=Homo sapiens GN=C20orf152 PE=2 SV=2 (Range: 1-78)
3 TM0002 TM0002 281883 Purified-2001-08-29 41 NEW_HUMAN_DOMAINS 12-40 -5.680 27  tr|F8VX55|F8VX55_HUMAN Uncharacterized protein OS=Homo sapiens GN=TFCP2 PE=4 SV=1 (Range: 1-54)
4 TM0003 TM0003 281884 Purified-2001-12-06 40 NEW_HUMAN_DOMAINS 2-39 -4.970 26  sp|Q9NYP8|CU062_HUMAN Uncharacterized protein C21orf62 OS=Homo sapiens GN=C21orf62 PE=1 SV=2 (Range: 160-219)
5 TM0004 TM0004 281885 Purified-2004-07-19 31 NEW_HUMAN_DOMAINS 2-31 -6.040 23  sp|Q56UN5|YSK4_HUMAN SPS1/STE20-related protein kinase YSK4 OS=Homo sapiens GN=YSK4 PE=1 SV=1 (Range: 622-678)
6 TM0005 TM0005 281886 Purified-2001-01-30 650 NEW_HUMAN_DOMAINS 176-319 -6.510 12  sp|Q8IVG5|SAM9L_HUMAN Sterile alpha motif domain-containing protein 9-like OS=Homo sapiens GN=SAMD9L PE=1 SV=2 (Range: 687-863)
7 TM0006 TM0006 281887 Diffraction|HSQC-2004-07-13 345 NEW_HUMAN_DOMAINS 156-270 -5.470 12  sp|Q96F46|I17RA_HUMAN Interleukin-17 receptor A OS=Homo sapiens GN=IL17RA PE=1 SV=2 (Range: 536-643)
8 TM0007 TM0007 281888 Purified-2004-07-19 438 NEW_HUMAN_DOMAINS 328-379 -4.660 15  sp|Q9NT68|TEN2_HUMAN Teneurin-2 OS=Homo sapiens GN=ODZ2 PE=1 SV=3 (Range: 2403-2499)
9 TM0008 TM0008 281889 Crystal|NMR-2001-04-01 224 NEW_HUMAN_DOMAINS 101-219 -6.480 13  tr|B5MCL5|B5MCL5_HUMAN Uncharacterized protein OS=Homo sapiens GN=SMARCB1 PE=4 SV=1 (Range: 1-132)
10 TM0009 TM0009 281890 Purified-2001-02-14 142 NEW_HUMAN_DOMAINS 108-142 -5.880 14  sp|Q63HK5|TSH3_HUMAN Teashirt homolog 3 OS=Homo sapiens GN=TSHZ3 PE=1 SV=2 (Range: 902-975)
11 TM0010 TM0010 281891 Purified-2005-03-03 607 NEW_HUMAN_DOMAINS 436-539 -5.430 13  sp|Q6N043|Z280D_HUMAN Zinc finger protein 280D OS=Homo sapiens GN=ZNF280D PE=1 SV=3 (Range: 618-723)
12 TM0011 TM0011 281892 Purified-2004-02-02 128 NEW_HUMAN_DOMAINS 31-123 -7.880 11  sp|Q2QL34|MP17L_HUMAN Mpv17-like protein OS=Homo sapiens GN=MPV17L PE=1 SV=1 (Range: 1-104)
13 TM0012 TM0012 281893 Purified-2001-08-29 176 NEW_HUMAN_DOMAINS 19-91 -6.840 16  sp|Q49AR2|CE022_HUMAN UPF0489 protein C5orf22 OS=Homo sapiens GN=C5orf22 PE=1 SV=2 (Range: 258-442)
14 TM0013 TM0013 281894 Purified-2001-08-24 253 NEW_HUMAN_DOMAINS 34-167 -5.560 15  sp|Q8N201|INT1_HUMAN Integrator complex subunit 1 OS=Homo sapiens GN=INTS1 PE=1 SV=2 (Range: 113-266)
15 TM0014 TM0014 281895 Purified-2001-01-30 278 NEW_HUMAN_DOMAINS 55-274 -7.880 10  sp|Q8TD57|DYH3_HUMAN Dynein heavy chain 3, axonemal OS=Homo sapiens GN=DNAH3 PE=2 SV=1 (Range: 234-801)
16 TM0015 TM0015 281896 PDB-2007-09-14 192 NEW_HUMAN_DOMAINS 14-75 -4.870 11  sp|Q93073|SBP2L_HUMAN Selenocysteine insertion sequence-binding protein 2-like OS=Homo sapiens GN=SECISBP2L PE=2 SV=3 (Range: 1-149)
17 TM0016 TM0016 281897 Purified-2001-08-24 101 NEW_HUMAN_DOMAINS 53-101 -8.810 12  sp|Q8NCS7|CTL5_HUMAN Choline transporter-like protein 5 OS=Homo sapiens GN=SLC44A5 PE=2 SV=2 (Range: 99-240)
18 TM0017 TM0017 281898 Purified-2003-03-05 394 NEW_HUMAN_DOMAINS 11-48 -6.380 27  sp|Q68CZ2|TENS3_HUMAN Tensin-3 OS=Homo sapiens GN=TNS3 PE=1 SV=2 (Range: 774-862)
19 TM0018 TM0018 281899 Purified-2001-08-24 324 NEW_HUMAN_DOMAINS 26-142 -5.480 14  sp|Q96JH7|VCIP1_HUMAN Deubiquitinating protein VCIP135 OS=Homo sapiens GN=VCPIP1 PE=1 SV=2 (Range: 42-180)
20 TM0019 TM0019 281900 Crystal|NMR-2004-03-31 256 NEW_HUMAN_DOMAINS 56-91 -5.150 16  tr|Q6ZNX1|Q6ZNX1_HUMAN CDNA FLJ26957 fis, clone SLV00486 OS=Homo sapiens PE=2 SV=1 (Range: 176-250)


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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Ye Y, Godzik A. FATCAT: a web server for flexible structure comparison and structure similarity searching. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W582-5.