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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 182next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508; 217 H.sapiens 105-201 -8.320 sp|P43403|ZAP70_HUMAN Tyrosine-protein kinase ZAP-70 OS=Homo sapiens GN=ZAP70 PE=1 SV=1 (Range: 151-450)
2 HGC00044 gi|162658718|dbj|BAAX01000887.1|1.0 TMP00920; 360 H.sapiens 61-148 -9.890 11  sp|P43308|SSRB_HUMAN(removed signalp:1-17) Translocon-associated protein subunit beta OS=Homo sapiens GN=SSR2 PE=1 SV=1
3 HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000; 81 H.sapiens 2-46 -6.960 22  sp|Q86UK0|ABCAC_HUMAN(removed signalp:1-45) ATP-binding cassette sub-family A member 12 OS=Homo sapiens GN=ABCA12 PE=1 SV=3 (Range: 1951-2250)
4 HGC00150 gi|162733542|dbj|BAAZ01030454.1|1.0 TMP01074; 227 H.sapiens 12-195 -6.720 11  sp|P82673|RT35_HUMAN(removed signalp:1-16) 28S ribosomal protein S35, mitochondrial OS=Homo sapiens GN=MRPS35 PE=1 SV=1
5 HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833; 173 H.sapiens 73-152 -7.040 18  sp|Q502W6|VWA3B_HUMAN von Willebrand factor A domain-containing protein 3B OS=Homo sapiens GN=VWA3B PE=2 SV=3 (Range: 601-900)
6 HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473; 223 H.sapiens 139-223 -8.460 12  sp|Q5XLA6|CAR17_HUMAN Caspase recruitment domain-containing protein 17 OS=Homo sapiens GN=CARD17 PE=1 SV=1
7 HGC00248 gi|162576253|dbj|BAAV01029229.1|2.0 TMP00024; 121 H.sapiens 2-121 -6.780 sp|O75400|PR40A_HUMAN Pre-mRNA-processing factor 40 homolog A OS=Homo sapiens GN=PRPF40A PE=1 SV=2 (Range: 301-600)
8 HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066; 164 H.sapiens 19-47 -7.440 25  sp|O15119|TBX3_HUMAN T-box transcription factor TBX3 OS=Homo sapiens GN=TBX3 PE=1 SV=4 (Range: 451-743)
9 HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178; 122 H.sapiens 4-49 -9.490 19  sp|Q02224|CENPE_HUMAN Centromere-associated protein E OS=Homo sapiens GN=CENPE PE=1 SV=2 (Range: 2551-2701)
10 HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304; 200 H.sapiens 8-171 -7.920 14  sp|Q9H9Q2|CSN7B_HUMAN COP9 signalosome complex subunit 7b OS=Homo sapiens GN=COPS7B PE=1 SV=1
11 HGC00422 gi|163631722|dbj|BABG01004545.1|2.0 TMP00397; 274 H.sapiens 127-197 -7.560 21  sp|Q8IZM0|CNG1O_HUMAN Putative CNGA1-overlapping antisense gene protein OS=Homo sapiens PE=5 SV=1
12 HGC00429 gi|162734516|dbj|BAAZ01029480.1|1.0 TMP00411; 255 H.sapiens 25-254 -6.920 11  sp|Q9H2U1|DHX36_HUMAN Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36 PE=1 SV=2 (Range: 751-1008)
13 HGC00485 gi|163636056|dbj|BABG01000217.1|3.0 TMP00523; 127 H.sapiens 34-125 -6.990 12  sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7 PE=1 SV=3 (Range: 2251-2550)
14 HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561; 136 H.sapiens 23-81 -7.570 sp|Q92585|MAML1_HUMAN Mastermind-like protein 1 OS=Homo sapiens GN=MAML1 PE=1 SV=3 (Range: 601-900)
15 HGC00518 gi|162728471|dbj|BAAY01000490.1|2.0 TMP00574; 92 H.sapiens 7-88 -7.570 11  sp|P51178|PLCD1_HUMAN 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-1 OS=Homo sapiens GN=PLCD1 PE=1 SV=2 (Range: 601-756)
16 HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580; 203 H.sapiens 3-176 -9.570 10  sp|Q5TAX3|TUT4_HUMAN Terminal uridylyltransferase 4 OS=Homo sapiens GN=ZCCHC11 PE=1 SV=3 (Range: 301-600)
17 HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636; 115 H.sapiens 4-113 -10.600 18  sp|Q9BSN7|TM204_HUMAN(removed signalp:1-25) Transmembrane protein 204 OS=Homo sapiens GN=TMEM204 PE=2 SV=1
18 HGC00573 gi|163306732|dbj|BABD01003960.1|2.0 TMP00669; 125 H.sapiens 57-106 -6.310 27  sp|Q9BUE6|ISCA1_HUMAN Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Homo sapiens GN=ISCA1 PE=2 SV=1
19 HGC00579 gi|163284429|dbj|BABD01026259.1|2.0 TMP00679; 172 H.sapiens 142-172 -7.510 sp|Q2M1Z3|RHG31_HUMAN Rho GTPase-activating protein 31 OS=Homo sapiens GN=ARHGAP31 PE=1 SV=2 (Range: 301-600)
20 HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709; 112 H.sapiens 17-48 -9.040 36  sp|Q05209|PTN12_HUMAN Tyrosine-protein phosphatase non-receptor type 12 OS=Homo sapiens GN=PTPN12 PE=1 SV=3 (Range: 601-780)


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Ye Y, Godzik A. FATCAT: a web server for flexible structure comparison and structure similarity searching. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W582-5.